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IMGVR_UViG_3300045988_100814-3300045988-Ga0495776_182463_10174_10302

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300045988_100814-3300045988-Ga0495776_182463_10174_10302 ↗
Kingdom:: archaea

Quality

73.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-42

PDB

Domain cluster: representative

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3w0fA02	1.10.8.50	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.80	56.0	3.85e-01	73.8%	23.5%
1twfI01	2.20.25.10	Mainly Beta › Single Sheet › N-terminal domain of TfIIb ›	0.69	49.0	4.79e-01	76.2%	71.7%
1vchD00	3.40.50.2020	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.57	41.0	2.85e-01	90.5%	19.7%
6ks6a01	1.10.560.10	Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain	0.56	40.0	2.48e-01	76.2%	23.1%
1icwB00	2.40.50.40	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) ›	0.52	39.0	3.51e-01	90.5%	56.1%
1k0rA01	3.30.1480.10	Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain	0.52	38.0	3.10e-01	88.1%	49.5%
1owbA01	2.20.28.60	Mainly Beta › Single Sheet › Rubrerythrin, domain 2 ›	0.51	35.0	3.47e-01	88.1%	69.4%
2l6lA02	3.10.660.10	Alpha Beta › Roll › Microbial ribonuclease fold › DPH Zinc finger	0.50	34.0	3.17e-01	90.5%	47.7%

ECOD (16)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3787715	375.1.1.228 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF29101	0.83	58.0	5.47e-01	73.8%	66.0%
5026377	375.1.1.9 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-C4_Topoisom	0.74	56.0	4.55e-01	85.7%	43.8%
4488182	375.1.1.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related	0.70	54.0	5.50e-01	85.7%	92.5%
5036769	375.1.1.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related	0.68	52.0	5.29e-01	85.7%	97.5%
4967209	375.1.1.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related	0.68	54.0	4.27e-01	90.5%	43.3%
4223583	375.1.1.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related	0.64	49.0	4.87e-01	92.9%	82.2%
3518993	4.8.1.0 ↗	beta barrels › SH3 › Chromo domain-like › Chromo domain-like	0.56	39.0	4.04e-01	88.1%	100.0%
4975015	60.1.2.1 ↗	beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku	0.55	40.0	2.63e-01	90.5%	64.5%
4434485	387.1.1.24 ↗	few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related › Toxin_35	0.54	40.0	3.83e-01	83.3%	67.9%
3931292	391.1.1.0 ↗	few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module	0.52	36.0	3.65e-01	81.0%	75.0%
4661211	60.1.2.1 ↗	beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku	0.52	38.0	2.51e-01	95.2%	28.1%
3886839	391.1.1.1 ↗	few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › fn1	0.52	36.0	3.68e-01	81.0%	80.0%
4987158	60.1.2.1 ↗	beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku	0.52	39.0	2.54e-01	100.0%	15.9%
4992391	60.1.2.1 ↗	beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku	0.51	37.0	2.45e-01	95.2%	27.0%
3882733	3935.1.1.1 ↗	extended segments › 4E-BP2 › 4E-BP2 › 4E-BP2 › eIF_4EBP	0.51	35.0	3.14e-01	100.0%	47.1%
3897880	3935.1.1.1 ↗	extended segments › 4E-BP2 › 4E-BP2 › 4E-BP2 › eIF_4EBP	0.51	34.0	3.31e-01	100.0%	58.2%