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IMGVR_UViG_3300045988_100814-3300045988-Ga0495776_182463_12815_13480
Arc-VirIMGVR_UViG_3300045988_100814-3300045988-Ga0495776_182463_12815_13480
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-128
Domain cluster:
rep: MT006234.1__QIG78055.1__BRUR0010001c01_00024__00024__D3-152
CATH (46)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1h2iA01 | 3.30.390.80 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › DNA repair protein Rad52/59/22 | 0.74 | 69.0 | 6.41e-01 | 100.0% | 89.9% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.65 | 47.0 | 4.34e-01 | 74.6% | 80.0% |
| 2rfrA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 46.0 | 4.24e-01 | 86.1% | 57.1% |
| 4kwyA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.64 | 56.0 | 5.43e-01 | 95.1% | 96.4% |
| 3ebtA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 45.0 | 4.44e-01 | 90.2% | 67.9% |
| 1qj8A00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.64 | 45.0 | 4.19e-01 | 72.1% | 83.8% |
| 3d9rB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 43.0 | 4.26e-01 | 91.0% | 65.4% |
| 2obdA02 | 3.15.10.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 | 0.63 | 44.0 | 3.76e-01 | 71.3% | 62.4% |
| 3hx8A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 42.0 | 4.22e-01 | 86.9% | 66.4% |
| 4akrA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.62 | 45.0 | 4.28e-01 | 76.2% | 79.6% |
| 1fx3B00 | 3.10.420.10 | Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like | 0.62 | 47.0 | 4.41e-01 | 100.0% | 65.8% |
| 3f7sA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 45.0 | 4.30e-01 | 92.6% | 66.2% |
| 4kghA00 | 3.15.10.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 | 0.61 | 43.0 | 3.68e-01 | 72.1% | 64.8% |
| 1vl4A01 | 3.30.2290.10 | Alpha Beta › 2-Layer Sandwich › PmbA/TldD fold › PmbA/TldD superfamily | 0.61 | 38.0 | 3.17e-01 | 75.4% | 37.1% |
| 5ig0A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 42.0 | 4.15e-01 | 84.4% | 67.2% |
| 2iqiB00 | 3.40.50.10610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component | 0.60 | 52.0 | 4.65e-01 | 94.3% | 87.7% |
| 1s3rA02 | 3.30.1040.20 | Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A › | 0.60 | 27.0 | 4.05e-01 | 81.1% | 100.0% |
| 2f86B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 41.0 | 4.08e-01 | 84.4% | 66.7% |
| 5tseA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.59 | 53.0 | 5.10e-01 | 96.7% | 92.6% |
| 3w1eA02 | 3.40.50.10610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component | 0.59 | 53.0 | 4.68e-01 | 97.5% | 95.5% |
| 3h51A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 40.0 | 3.84e-01 | 91.0% | 59.9% |
| 2b1xB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 45.0 | 4.12e-01 | 82.0% | 77.8% |
| 2bmoB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 44.0 | 3.82e-01 | 80.3% | 68.0% |
| 2ckfB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 44.0 | 3.94e-01 | 79.5% | 75.9% |
| 2gtlM02 | 2.40.128.620 | Mainly Beta › Beta Barrel › Lipocalin › | 0.58 | 46.0 | 4.11e-01 | 82.8% | 94.6% |
| 4kz1A00 | 3.10.450.230 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein | 0.57 | 42.0 | 4.10e-01 | 76.2% | 71.9% |
| 3b8lA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 43.0 | 4.15e-01 | 81.1% | 75.9% |
| 1q42A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 44.0 | 4.07e-01 | 85.2% | 64.2% |
| 4n4rB00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.56 | 48.0 | 4.52e-01 | 95.9% | 85.4% |
| 3hzpA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 40.0 | 3.99e-01 | 78.7% | 71.7% |
| 1uliB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 43.0 | 3.84e-01 | 82.0% | 75.7% |
| 2r76A00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.55 | 48.0 | 4.69e-01 | 94.3% | 94.7% |
| 3zpmA00 | 3.15.10.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 | 0.55 | 39.0 | 3.30e-01 | 73.0% | 62.1% |
| 3cnxA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 41.0 | 3.98e-01 | 78.7% | 69.6% |
| 4gb5A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 42.0 | 4.01e-01 | 82.8% | 75.7% |
| 3ub1A01 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 37.0 | 3.59e-01 | 74.6% | 61.8% |
| 3ff0A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 41.0 | 3.95e-01 | 81.1% | 74.5% |
| 4uv3E01 | 3.40.50.10610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component | 0.53 | 45.0 | 3.86e-01 | 95.1% | 74.9% |
| 3gp6A00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.53 | 42.0 | 3.93e-01 | 86.9% | 73.5% |
| 3ga2A00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.52 | 44.0 | 3.57e-01 | 91.0% | 57.2% |
| 4fuvA00 | 2.40.160.170 | Mainly Beta › Beta Barrel › Porin › | 0.52 | 38.0 | 3.20e-01 | 76.2% | 93.0% |
| 1se8A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 37.0 | 3.91e-01 | 77.0% | 81.1% |
| 3hvnA02 | 3.30.1040.20 | Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A › | 0.51 | 24.0 | 3.45e-01 | 81.1% | 100.0% |
| 2bi0A01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 39.0 | 3.65e-01 | 81.1% | 85.0% |
| 4frxA01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.51 | 43.0 | 3.04e-01 | 93.4% | 92.9% |
| 2vw9B00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 38.0 | 4.07e-01 | 82.8% | 90.5% |
ECOD (57)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3177367 | 330.1.1.4 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Rad52_Rad22 | 0.75 | 70.0 | 6.39e-01 | 98.4% | 91.6% |
| 3786132 | 330.1.1.4 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Rad52_Rad22 | 0.75 | 70.0 | 6.61e-01 | 100.0% | 93.1% |
| 1871052 | 330.1.1.4 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Rad52_Rad22 | 0.74 | 69.0 | 5.88e-01 | 100.0% | 71.8% |
| 3177409 | 330.1.1.13 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Mgm101p | 0.73 | 64.0 | 5.72e-01 | 100.0% | 68.5% |
| 4886881 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.69 | 48.0 | 4.59e-01 | 77.0% | 63.0% |
| 4892175 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.68 | 47.0 | 4.58e-01 | 77.0% | 64.4% |
| 3957483 | 243.1.1.77 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF29518 | 0.67 | 46.0 | 4.46e-01 | 74.6% | 63.0% |
| 4018556 | 330.1.1.4 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Rad52_Rad22 | 0.67 | 62.0 | 5.65e-01 | 100.0% | 83.1% |
| 4136159 | 7503.1.1.0 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain | 0.67 | 63.0 | 5.47e-01 | 100.0% | 96.6% |
| 3171541 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.67 | 52.0 | 5.18e-01 | 89.3% | 78.3% |
| 3962922 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.66 | 48.0 | 4.29e-01 | 78.7% | 55.2% |
| 4135737 | 243.1.1.66 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TcaA_5th | 0.65 | 42.0 | 4.38e-01 | 74.6% | 69.6% |
| 4823574 | 4030.1.1.1 ↗ | alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › F_actin_cap_B | 0.65 | 48.0 | 4.40e-01 | 76.2% | 80.1% |
| 4278326 | 7503.1.1.0 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain | 0.64 | 56.0 | 5.44e-01 | 94.3% | 94.1% |
| 1070223 | 7503.1.1.4 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › LptE | 0.64 | 56.0 | 5.43e-01 | 95.1% | 96.4% |
| 3385898 | 7503.1.1.1 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › CsgG | 0.64 | 57.0 | 5.21e-01 | 95.1% | 99.4% |
| 3588483 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.63 | 45.0 | 4.35e-01 | 73.8% | 65.7% |
| 3838651 | 243.1.1.6 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › VirB8 | 0.63 | 45.0 | 4.24e-01 | 74.6% | 66.7% |
| 3285905 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.63 | 42.0 | 4.16e-01 | 73.0% | 63.8% |
| 4025861 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.62 | 46.0 | 4.10e-01 | 76.2% | 74.1% |
| 2552604 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.62 | 45.0 | 4.37e-01 | 76.2% | 68.1% |
| 3163625 | 7503.1.1.4 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › LptE | 0.62 | 53.0 | 5.05e-01 | 93.4% | 90.3% |
| 3282685 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.62 | 42.0 | 4.31e-01 | 74.6% | 71.7% |
| 4427435 | 7503.1.1.22 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › PF29199 | 0.61 | 56.0 | 5.28e-01 | 97.5% | 99.3% |
| 4025435 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.61 | 44.0 | 3.85e-01 | 75.4% | 73.2% |
| 3811744 | 243.1.1.49 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF2358 | 0.61 | 46.0 | 4.39e-01 | 80.3% | 68.6% |
| 3954741 | 243.1.1.26 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 | 0.60 | 45.0 | 4.41e-01 | 78.7% | 72.6% |
| 3242736 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.60 | 45.0 | 4.34e-01 | 78.7% | 68.6% |
| 3387344 | 7503.1.1.4 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › LptE | 0.60 | 53.0 | 5.04e-01 | 96.7% | 92.4% |
| 3696424 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.60 | 46.0 | 4.33e-01 | 81.1% | 72.7% |
| 3980178 | 7503.1.1.13 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › Lipoprotein_16 | 0.60 | 52.0 | 4.65e-01 | 94.3% | 87.1% |
| 3479831 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.59 | 46.0 | 4.14e-01 | 82.0% | 74.5% |
| 3963916 | 7503.1.1.6 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › GNA1162-like | 0.59 | 54.0 | 4.67e-01 | 100.0% | 95.7% |
| 3284807 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.59 | 42.0 | 4.08e-01 | 77.9% | 65.9% |
| 3600840 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.58 | 43.0 | 4.67e-01 | 80.3% | 95.0% |
| 139114 | 243.1.1.1 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Ring_hydroxyl_B | 0.58 | 44.0 | 3.84e-01 | 81.1% | 71.5% |
| 5060223 | 2484.1.1.43 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 | 0.57 | 46.0 | 3.77e-01 | 83.6% | 55.6% |
| 4199388 | 504.1.1.1 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › SecB | 0.57 | 46.0 | 4.37e-01 | 100.0% | 72.4% |
| 4022650 | 9.3.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like | 0.57 | 47.0 | 3.95e-01 | 89.3% | 88.3% |
| 3181202 | 243.1.1.26 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 | 0.56 | 42.0 | 3.96e-01 | 80.3% | 75.3% |
| 3388283 | 7503.1.1.0 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain | 0.55 | 49.0 | 4.52e-01 | 97.5% | 95.5% |
| 196538 | 7503.1.1.4 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › LptE | 0.55 | 48.0 | 4.69e-01 | 94.3% | 94.7% |
| 3385571 | 7503.1.1.0 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain | 0.55 | 47.0 | 3.97e-01 | 93.4% | 91.7% |
| 3959921 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.55 | 33.0 | 3.95e-01 | 91.0% | 92.4% |
| 3238606 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.54 | 39.0 | 4.05e-01 | 76.2% | 80.0% |
| 1558627 | 243.1.1.15 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › T4BSS_DotI_IcmL | 0.54 | 39.0 | 3.84e-01 | 76.2% | 70.8% |
| 3641463 | 243.1.1.24 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › ARC6-like_IMS | 0.54 | 41.0 | 3.93e-01 | 81.1% | 71.0% |
| 3277986 | 243.1.1.28 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 | 0.54 | 38.0 | 3.82e-01 | 78.7% | 70.5% |
| 1684828 | 243.1.1.67 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Cds6_C | 0.54 | 38.0 | 3.82e-01 | 77.0% | 70.9% |
| 3263321 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.53 | 37.0 | 3.58e-01 | 73.0% | 66.9% |
| 3203073 | 867.1.1.1 ↗ | a+b three layers › Coproporphyrinogen III oxidase › Coproporphyrinogen III oxidase › Coproporphyrinogen III oxidase › Coprogen_oxidas | 0.53 | 38.0 | 2.73e-01 | 73.8% | 35.4% |
| 4941606 | 283.2.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like | 0.53 | 40.0 | 3.86e-01 | 79.5% | 95.0% |
| 4464020 | 7504.1.1.1 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › Ham1p_like | 0.53 | 48.0 | 4.00e-01 | 100.0% | 97.1% |
| 3362309 | 11.1.1.51 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LEA_2 | 0.51 | 44.0 | 3.83e-01 | 93.4% | 87.9% |
| 3212332 | 243.1.1.85 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26531 | 0.51 | 40.0 | 3.98e-01 | 91.0% | 79.2% |
| 3466697 | 11.1.1.51 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LEA_2 | 0.51 | 39.0 | 3.48e-01 | 81.1% | 84.6% |
| 3925379 | 7504.1.1.1 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › Ham1p_like | 0.51 | 44.0 | 3.71e-01 | 94.3% | 90.2% |
D2
high
residues 161-219
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vs0A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.73 | 48.0 | 4.31e-01 | 74.6% | 48.8% |
| 1dkxA02 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.71 | 63.0 | 5.68e-01 | 100.0% | 83.7% |
| 5tkyA05 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.70 | 60.0 | 5.33e-01 | 100.0% | 69.0% |
| 1sr2A00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.69 | 59.0 | 4.76e-01 | 100.0% | 49.1% |
| 1gvnA00 | 1.10.8.130 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.69 | 59.0 | 5.22e-01 | 96.6% | 86.2% |
| 2ewfA02 | 1.20.1270.310 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.69 | 59.0 | 5.42e-01 | 100.0% | 81.5% |
| 1skvA00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.68 | 45.0 | 4.45e-01 | 74.6% | 64.1% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.67 | 47.0 | 4.38e-01 | 74.6% | 86.7% |
| 2nr4A02 | 1.20.58.290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. | 0.67 | 41.0 | 4.14e-01 | 74.6% | 62.1% |
| 3hx3A01 | 1.10.8.20 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › N-terminal domain of phosphatidylinositol transfer protein sec14p | 0.65 | 55.0 | 5.35e-01 | 96.6% | 92.5% |
| 1bgfA00 | 1.10.532.10 | Mainly Alpha › Orthogonal Bundle › Transcription Factor, Stat-4 › STAT transcription factor, N-terminal domain | 0.64 | 49.0 | 3.86e-01 | 83.1% | 43.5% |
| 3fblA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 46.0 | 4.20e-01 | 78.0% | 74.4% |
| 2zxqA06 | 1.20.1270.70 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle | 0.64 | 53.0 | 5.21e-01 | 100.0% | 93.9% |
| 3ousA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.63 | 43.0 | 3.87e-01 | 71.2% | 92.7% |
| 2ptfB02 | 1.20.58.290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. | 0.63 | 40.0 | 4.08e-01 | 71.2% | 66.7% |
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 52.0 | 5.31e-01 | 100.0% | 94.8% |
| 1vhnA02 | 1.10.1200.80 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Putative flavin oxidoreducatase; domain 2 | 0.62 | 45.0 | 4.23e-01 | 76.3% | 95.8% |
| 2wl8C00 | 1.20.120.900 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pex19, mPTS binding domain | 0.62 | 55.0 | 4.49e-01 | 100.0% | 78.9% |
| 3v76A03 | 1.10.8.260 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › HI0933 insert domain-like | 0.62 | 47.0 | 4.73e-01 | 84.7% | 96.7% |
| 3fppA03 | 6.10.140.1990 | Special › Helix non-globular › Helix Hairpins › | 0.61 | 43.0 | 3.80e-01 | 74.6% | 58.0% |
| 1u5pA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 42.0 | 3.51e-01 | 74.6% | 42.6% |
| 1n69B00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.60 | 42.0 | 3.82e-01 | 72.9% | 93.8% |
| 3agtA00 | 1.20.120.50 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like | 0.60 | 50.0 | 4.02e-01 | 100.0% | 60.2% |
| 3gi7A00 | 1.20.1270.180 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.60 | 50.0 | 4.32e-01 | 100.0% | 85.4% |
| 6ygiB01 | 1.10.4090.10 | Mainly Alpha › Orthogonal Bundle › Hepatitis B viral capsid (hbcag) fold › Viral capsid, core domain supefamily, Hepatitis B virus | 0.60 | 48.0 | 3.76e-01 | 94.9% | 68.5% |
| 1qgtB00 | 1.10.4090.10 | Mainly Alpha › Orthogonal Bundle › Hepatitis B viral capsid (hbcag) fold › Viral capsid, core domain supefamily, Hepatitis B virus | 0.59 | 42.0 | 3.22e-01 | 76.3% | 75.5% |
| 2yevC00 | 6.10.280.110 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 41.0 | 4.03e-01 | 74.6% | 76.2% |
| 1b0bA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.58 | 49.0 | 3.80e-01 | 98.3% | 63.8% |
| 1vf7A03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.58 | 39.0 | 3.97e-01 | 72.9% | 98.3% |
| 4rv5A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 44.0 | 3.08e-01 | 86.4% | 67.5% |
| 3b9qA01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.56 | 44.0 | 3.95e-01 | 91.5% | 76.4% |
| 3djaA01 | 1.20.920.70 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.56 | 47.0 | 3.64e-01 | 100.0% | 50.3% |
| 3llkA02 | 1.20.120.310 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain | 0.55 | 45.0 | 3.52e-01 | 96.6% | 41.3% |
| 2ra1A03 | 1.20.58.770 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 48.0 | 4.77e-01 | 100.0% | 96.8% |
| 3t38A01 | 1.10.8.1060 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Corynebacterium glutamicum thioredoxin-dependent arsenate reductase, N-terminal domain | 0.54 | 45.0 | 4.32e-01 | 96.6% | 84.5% |
| 6cy5A01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.53 | 42.0 | 3.83e-01 | 94.9% | 80.9% |
| 5nl6A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 46.0 | 3.80e-01 | 100.0% | 83.3% |
| 3rssA02 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.52 | 43.0 | 2.88e-01 | 100.0% | 90.8% |
| 3aleA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.51 | 40.0 | 3.17e-01 | 93.2% | 81.8% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4993069 | 632.12.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Vng1086c-like › Vng1086c-like › UPF0058 | 0.76 | 65.0 | 6.46e-01 | 100.0% | 95.2% |
| 4181278 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.75 | 67.0 | 6.18e-01 | 100.0% | 89.3% |
| 4385343 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.73 | 64.0 | 5.86e-01 | 100.0% | 83.7% |
| 4886450 | 511.1.1.1 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 | 0.73 | 64.0 | 5.85e-01 | 100.0% | 83.7% |
| 3273890 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.73 | 64.0 | 5.62e-01 | 100.0% | 74.4% |
| 4360723 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.72 | 63.0 | 5.51e-01 | 100.0% | 74.4% |
| 3497645 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.71 | 45.0 | 4.05e-01 | 72.9% | 47.5% |
| 4136110 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.71 | 62.0 | 5.81e-01 | 100.0% | 89.3% |
| 4033271 | 4125.1.1.0 ↗ | alpha superhelices › BH3980-like › BH3980-like › BH3980-like | 0.70 | 60.0 | 5.05e-01 | 100.0% | 57.0% |
| 3693465 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.70 | 47.0 | 3.65e-01 | 74.6% | 34.2% |
| 3602 | 632.6.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit › Epsilon_antitox | 0.69 | 59.0 | 5.22e-01 | 96.6% | 86.2% |
| 3506685 | 1134.1.1.0 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain | 0.68 | 44.0 | 4.06e-01 | 74.6% | 52.0% |
| 5054168 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.67 | 57.0 | 5.56e-01 | 100.0% | 98.5% |
| 4024277 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.67 | 47.0 | 4.35e-01 | 74.6% | 90.7% |
| 3896392 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.65 | 44.0 | 4.25e-01 | 74.6% | 63.1% |
| 4175392 | 4044.1.1.1 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Prismane | 0.65 | 54.0 | 4.45e-01 | 96.6% | 59.1% |
| 3740106 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.65 | 46.0 | 3.69e-01 | 74.6% | 39.1% |
| 3600071 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.64 | 39.0 | 3.81e-01 | 71.2% | 53.8% |
| 3224 | 515.1.1.1 ↗ | alpha arrays › Transcription factor STAT-4 N-domain › Transcription factor STAT-4 N-domain › Transcription factor STAT-4 N-domain › STAT_int | 0.64 | 49.0 | 3.86e-01 | 83.1% | 43.5% |
| 3214308 | 375.1.1.313 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › CCD_aECM | 0.64 | 34.0 | 3.55e-01 | 98.3% | 55.6% |
| 1584477 | 102.2.1.6 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH › HI0933_like_1st | 0.62 | 48.0 | 4.64e-01 | 84.7% | 89.6% |
| 3635475 | 148.1.3.113 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_TRIP13_C | 0.60 | 53.0 | 4.13e-01 | 98.3% | 91.2% |
| 4935180 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.60 | 39.0 | 3.30e-01 | 81.4% | 40.0% |
| 4324547 | 544.1.1.2 ↗ | alpha bundles › Functional domain of the splicing factor Prp18 › Functional domain of the splicing factor Prp18 › Functional domain of the splicing factor Prp18 › SRA1 | 0.59 | 49.0 | 4.20e-01 | 100.0% | 97.1% |
| 4942992 | 103.5.1.0 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like | 0.59 | 41.0 | 4.34e-01 | 89.8% | 90.0% |
| 4118498 | 181.1.1.1 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N | 0.57 | 45.0 | 4.09e-01 | 93.2% | 83.5% |
| 4606152 | 4163.1.1.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 | 0.55 | 50.0 | 3.55e-01 | 100.0% | 65.3% |
| 3834678 | 181.1.1.1 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N | 0.54 | 43.0 | 3.75e-01 | 94.9% | 66.7% |
| 4994898 | 181.1.1.1 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N | 0.54 | 43.0 | 3.93e-01 | 93.2% | 96.5% |
| 4594328 | 181.1.1.2 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › FlhF_N | 0.53 | 40.0 | 3.84e-01 | 91.5% | 70.7% |