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IMGVR_UViG_3300045988_100814-3300045988-Ga0495776_182463_20348_20677

Arc-Vir

IMGVR_UViG_3300045988_100814-3300045988-Ga0495776_182463_20348_20677

Quality

75.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-84
PDB
Domain cluster: representative
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2giaB00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.70 49.0 4.09e-01 74.4% 52.7%
1e8oA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.66 43.0 4.52e-01 70.7% 73.0%
1yemB00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.65 51.0 4.00e-01 85.4% 41.0%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.65 48.0 4.45e-01 79.3% 85.6%
2acaA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.64 51.0 3.93e-01 85.4% 39.7%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.63 52.0 4.32e-01 89.0% 63.6%
1hlcA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.63 55.0 4.81e-01 100.0% 81.4%
5gm0A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.63 56.0 4.62e-01 100.0% 79.1%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 49.0 4.27e-01 85.4% 100.0%
3kxyJ00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.62 51.0 4.36e-01 87.8% 82.2%
2qmiA02 2.40.128.210 Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain 0.62 50.0 4.69e-01 86.6% 88.0%
5vxzA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.62 55.0 4.21e-01 100.0% 59.6%
2bs6A01 2.40.128.190 Mainly Beta › Beta Barrel › Lipocalin › 0.62 43.0 4.34e-01 73.2% 90.5%
4l3rA00 2.40.128.270 Mainly Beta › Beta Barrel › Lipocalin › 0.61 51.0 4.32e-01 93.9% 100.0%
6htnA01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.61 42.0 3.56e-01 72.0% 77.4%
1ddvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 45.0 4.22e-01 80.5% 90.4%
1ohfA03 2.60.270.70 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › 0.60 48.0 4.01e-01 85.4% 63.8%
2kieA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.60 46.0 4.11e-01 84.1% 77.4%
3v8uA04 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.60 48.0 4.02e-01 86.6% 100.0%
1dhkB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.60 54.0 4.11e-01 100.0% 90.8%
1b4tA00 2.60.40.200 Mainly Beta › Sandwich › Immunoglobulin-like › Superoxide dismutase, copper/zinc binding domain 0.59 46.0 3.77e-01 84.1% 100.0%
2erfA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 52.0 3.92e-01 100.0% 82.3%
6mlyB01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.59 47.0 3.29e-01 85.4% 69.5%
4azzA00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.58 51.0 4.13e-01 100.0% 86.1%
4chmB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 48.0 4.24e-01 92.7% 81.5%
2rcqA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 48.0 4.15e-01 97.6% 97.9%
1lkeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 43.0 3.52e-01 80.5% 92.4%
4mlgG00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.57 45.0 3.06e-01 85.4% 92.3%
1p6pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 45.0 3.93e-01 85.4% 100.0%
1e5tA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.57 44.0 2.98e-01 85.4% 94.3%
6c1zA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 48.0 4.13e-01 96.3% 100.0%
4g2sA00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.57 46.0 4.29e-01 89.0% 81.1%
1ospO01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.57 44.0 4.09e-01 84.1% 96.2%
4g59C02 3.30.500.30 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.57 40.0 3.19e-01 73.2% 83.5%
1lf7A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 46.0 3.69e-01 90.2% 85.4%
2oq1A03 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.55 46.0 4.32e-01 91.5% 100.0%
8f66A01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.55 42.0 3.12e-01 81.7% 67.6%
5mc9A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 46.0 3.64e-01 96.3% 80.2%
2r1bA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 46.0 3.57e-01 97.6% 75.8%
1epaA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 46.0 3.78e-01 96.3% 73.8%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 45.0 3.96e-01 93.9% 77.4%
6eugA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.54 43.0 2.88e-01 86.6% 80.7%
3asiA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 45.0 3.62e-01 97.6% 71.3%
3k1lA01 3.30.457.40 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › 0.53 42.0 4.09e-01 86.6% 91.3%
7b9cA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 40.0 2.69e-01 85.4% 97.1%
2kf2A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 43.0 3.57e-01 96.3% 80.2%
6c6sD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.52 35.0 3.85e-01 92.7% 95.0%
5agvA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.52 43.0 3.76e-01 91.5% 92.7%
3u1wA02 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 34.0 3.81e-01 78.0% 86.4%
4u6bA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.51 42.0 2.79e-01 90.2% 83.7%
3g1jA00 2.30.30.350 Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. 0.51 41.0 4.01e-01 87.8% 88.9%
3rlfF03 2.40.430.10 Mainly Beta › Beta Barrel › Periplasmic binding protein-like II › D-maltodextrin-binding protein, MBP 0.50 39.0 3.90e-01 85.4% 93.2%
1ud9A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.50 40.0 2.92e-01 89.0% 39.3%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3986751 3197.1.1.0 a+b two layers › N-terminal domain of effector protein PipB2 › N-terminal domain of effector protein PipB2 › N-terminal domain of effector protein PipB2 0.69 50.0 4.50e-01 75.6% 62.7%
5014898 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.69 54.0 3.37e-01 84.1% 89.7%
3404272 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.68 61.0 4.93e-01 100.0% 79.4%
3257847 4026.1.1.0 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.68 53.0 4.43e-01 84.1% 62.9%
3509388 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.67 59.0 3.74e-01 98.8% 23.4%
3605378 719.1.1.0 beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain 0.67 50.0 4.53e-01 79.3% 85.5%
3492787 3257.1.1.1 a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.67 44.0 3.43e-01 84.1% 31.2%
3743299 4026.1.1.0 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.67 52.0 4.72e-01 85.4% 61.8%
4589583 2008.1.1.191 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_HpaII 0.67 59.0 4.67e-01 100.0% 75.7%
3209046 109.4.1.559 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Tuberin 0.66 48.0 3.26e-01 85.4% 21.4%
4955729 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.66 58.0 4.63e-01 100.0% 82.9%
3742752 3257.1.1.1 a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.66 52.0 3.88e-01 85.4% 35.6%
3256023 4026.1.1.0 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.65 51.0 4.34e-01 84.1% 63.0%
3201065 3257.1.1.1 a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.65 51.0 3.76e-01 84.1% 34.0%
3700623 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.65 53.0 4.02e-01 86.6% 87.6%
5034929 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.65 52.0 3.79e-01 85.4% 64.0%
3640483 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.65 50.0 3.58e-01 85.4% 28.5%
4471281 10.1.1.89 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › PF26321 0.64 59.0 4.17e-01 100.0% 80.9%
3743364 4026.1.1.0 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.64 50.0 4.27e-01 85.4% 53.6%
3608279 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.64 53.0 4.93e-01 91.5% 100.0%
4029094 3257.1.1.0 a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain 0.63 46.0 3.48e-01 84.1% 32.0%
3254772 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.63 51.0 3.66e-01 85.4% 75.8%
3743890 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 48.0 3.98e-01 81.7% 53.8%
3707796 9.4.1.0 beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains 0.62 52.0 4.82e-01 92.7% 100.0%
3802876 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.62 45.0 3.01e-01 75.6% 85.4%
4027723 252.2.1.0 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.62 45.0 4.80e-01 75.6% 88.6%
3679968 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.62 56.0 4.20e-01 100.0% 91.4%
3925780 5.1.4.14 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.62 46.0 3.02e-01 79.3% 73.2%
5013176 4100.1.1.0 a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.62 48.0 5.01e-01 84.1% 98.7%
3690104 4026.1.1.0 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.62 49.0 4.04e-01 86.6% 62.7%
3314636 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.62 55.0 4.12e-01 100.0% 74.6%
3955040 3844.2.1.1 a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › ESX-1_EspG 0.61 48.0 3.34e-01 85.4% 50.2%
3596180 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.61 51.0 4.71e-01 91.5% 100.0%
3821077 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.61 54.0 3.51e-01 100.0% 40.0%
5035184 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.60 48.0 3.56e-01 86.6% 65.3%
3451914 10.1.1.2 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB 0.60 54.0 3.87e-01 100.0% 88.9%
3926989 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 47.0 3.08e-01 84.1% 94.2%
3394892 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.59 53.0 3.95e-01 100.0% 72.9%
2649512 77.1.1.1 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › Lipoprotein_1 0.59 44.0 3.34e-01 79.3% 49.2%
4681334 77.1.1.0 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein 0.58 45.0 3.25e-01 85.4% 59.6%
4028916 241.15.1.0 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.58 44.0 4.06e-01 82.9% 93.6%
3242777 3459.1.1.2 beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › DUF4773 0.57 50.0 4.43e-01 96.3% 96.6%
1005587 73.1.1.5 beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › PrgH 0.57 46.0 4.29e-01 89.0% 81.1%
3926611 5.1.4.220 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR35_2nd 0.56 48.0 3.27e-01 95.1% 94.9%
5014673 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.56 47.0 4.82e-01 91.5% 98.8%
3741838 5.1.4.62 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN 0.56 47.0 3.08e-01 91.5% 61.9%
3230359 207.1.1.66 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › DUF3557 0.55 47.0 3.22e-01 93.9% 29.2%
3716707 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.55 49.0 3.82e-01 100.0% 82.8%
3446490 5.1.3.68 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 0.54 45.0 2.91e-01 92.7% 96.9%
3819081 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.53 45.0 3.05e-01 92.7% 96.7%
3723616 5.1.4.35 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase 0.53 42.0 2.70e-01 86.6% 64.0%
3258825 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.51 41.0 2.67e-01 87.8% 52.7%
3672152 5.1.4.147 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RMC1_N 0.51 46.0 2.97e-01 97.6% 81.1%
4172290 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.51 42.0 3.64e-01 91.5% 76.9%