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IMGVR_UViG_3300045988_100814-3300045988-Ga0495776_182463_22563_23003
Arc-VirIMGVR_UViG_3300045988_100814-3300045988-Ga0495776_182463_22563_23003
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 72-137
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vw4A01 | 1.10.340.50 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › | 0.67 | 39.0 | 3.48e-01 | 71.2% | 41.3% |
| 6tmfT00 | 1.10.60.20 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 | 0.67 | 42.0 | 4.29e-01 | 75.8% | 65.6% |
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.64 | 32.0 | 2.99e-01 | 100.0% | 37.6% |
| 2xzmV01 | 1.10.60.20 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 | 0.63 | 39.0 | 4.04e-01 | 75.8% | 67.2% |
| 1e1dA02 | 1.20.1270.20 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.59 | 37.0 | 3.41e-01 | 100.0% | 48.8% |
| 3vvaA00 | 1.20.1260.140 | Mainly Alpha › Up-down Bundle › Ferritin › Alternative oxidase | 0.59 | 52.0 | 3.47e-01 | 100.0% | 54.5% |
| 1yozA00 | 1.10.3200.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › AF0941-like | 0.59 | 43.0 | 3.56e-01 | 98.5% | 45.1% |
| 4g1tA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 32.0 | 3.33e-01 | 95.5% | 55.7% |
| 2p0tA02 | 1.10.60.30 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › PSPTO4464-like domains | 0.56 | 43.0 | 4.25e-01 | 87.9% | 77.8% |
| 1nt2B02 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.55 | 39.0 | 3.93e-01 | 100.0% | 74.6% |
| 3obfA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.54 | 47.0 | 3.53e-01 | 100.0% | 95.5% |
| 4l7mA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.52 | 41.0 | 2.80e-01 | 87.9% | 43.3% |
| 4malA00 | 1.20.58.2200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 33.0 | 3.46e-01 | 86.4% | 72.9% |
| 3q5dA02 | 1.20.58.420 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP | 0.51 | 43.0 | 3.81e-01 | 100.0% | 62.9% |
| 1pn9B02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.51 | 44.0 | 3.62e-01 | 100.0% | 87.7% |
| 6tkvA01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.51 | 38.0 | 3.81e-01 | 100.0% | 77.9% |
| 2hxoA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.50 | 44.0 | 3.47e-01 | 100.0% | 45.8% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3583564 | 130.1.1.1 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP | 0.61 | 43.0 | 4.28e-01 | 77.3% | 80.0% |
| 4991095 | 7064.1.1.1 ↗ | alpha bundles › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › VIT1 | 0.58 | 51.0 | 3.91e-01 | 100.0% | 79.4% |
| 3594595 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 42.0 | 3.06e-01 | 78.8% | 57.9% |
| 3854050 | 604.12.1.43 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Tim17 | 0.56 | 48.0 | 3.90e-01 | 100.0% | 91.1% |
| 3549234 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.55 | 48.0 | 3.92e-01 | 100.0% | 93.8% |
| 1680005 | 604.30.1.1 ↗ | alpha bundles › Spectrin repeat-like › Gamma-secretase subunit PEN-2 › Gamma-secretase subunit PEN-2 › PEN-2 | 0.54 | 37.0 | 3.25e-01 | 72.7% | 61.0% |
| 3424102 | 604.30.1.1 ↗ | alpha bundles › Spectrin repeat-like › Gamma-secretase subunit PEN-2 › Gamma-secretase subunit PEN-2 › PEN-2 | 0.53 | 37.0 | 3.18e-01 | 72.7% | 61.0% |
| 4189213 | 5041.1.1.0 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C | 0.53 | 38.0 | 3.69e-01 | 100.0% | 66.7% |
| 3541873 | 3755.3.1.297 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF9 | 0.52 | 38.0 | 2.96e-01 | 77.3% | 100.0% |
| 5046057 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.52 | 38.0 | 3.91e-01 | 98.5% | 80.0% |
| 3997012 | 604.30.1.1 ↗ | alpha bundles › Spectrin repeat-like › Gamma-secretase subunit PEN-2 › Gamma-secretase subunit PEN-2 › PEN-2 | 0.51 | 36.0 | 3.21e-01 | 72.7% | 64.2% |
| 5018636 | 605.1.1.3 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_2 | 0.50 | 40.0 | 3.92e-01 | 100.0% | 80.0% |