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IMGVR_UViG_3300045988_146949-3300045988-Ga0495776_142637_10915_11826
Arc-VirIMGVR_UViG_3300045988_146949-3300045988-Ga0495776_142637_10915_11826
Identity
- Kingdom:
- archaea
Quality
80.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-99
Domain cluster:
rep: OP172638.1__WAX05392.1__AD70P2_00004__00004__D57-131
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05352.18 best | Phage_connector | 49.8 | 4.80e-13 | 99.0% | 31.0% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fouA02 | 2.40.500.10 | Mainly Beta › Beta Barrel › Upper collar protein gp10 (connector protein) fold › Upper collar protein gp10 (connector protein) | 0.88 | 71.0 | 6.29e-01 | 82.8% | 65.9% |
| 1gn4A02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.60 | 42.0 | 4.03e-01 | 78.8% | 63.5% |
| 1cfyA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.57 | 35.0 | 3.24e-01 | 74.7% | 46.6% |
| 4iupB01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 33.0 | 3.88e-01 | 78.8% | 93.5% |
| 3k2zA02 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.54 | 43.0 | 4.06e-01 | 85.9% | 74.8% |
| 1jheA00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.53 | 43.0 | 3.98e-01 | 86.9% | 71.0% |
| 3buuB00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.52 | 38.0 | 3.01e-01 | 78.8% | 40.9% |
| 2au3A02 | 3.90.980.10 | Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain | 0.50 | 34.0 | 3.24e-01 | 70.7% | 78.7% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4537309 | 4023.1.1.0 ↗ | a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core | 0.57 | 40.0 | 4.06e-01 | 72.7% | 76.8% |
| 3498587 | 219.1.1.97 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase | 0.54 | 44.0 | 3.43e-01 | 92.9% | 90.2% |
| 3208741 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.53 | 41.0 | 2.91e-01 | 82.8% | 69.7% |
| 4990371 | 70.1.1.0 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like | 0.52 | 28.0 | 3.22e-01 | 75.8% | 71.4% |
| 3496497 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.52 | 40.0 | 3.23e-01 | 83.8% | 82.9% |
| 3959531 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 34.0 | 3.96e-01 | 75.8% | 100.0% |
D2
medium
residues 217-266
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bbyA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.60 | 48.0 | 3.84e-01 | 98.0% | 56.4% |