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IMGVR_UViG_3300045988_150188-3300045988-Ga0495776_016157_27518_28345
Arc-VirIMGVR_UViG_3300045988_150188-3300045988-Ga0495776_016157_27518_28345
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 99-259
Domain cluster:
rep: SR-VP_2-4_scaffold_141_1208361_prodigal-single.1__X__X__00297__D46-187
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xdpA03 | 3.30.870.10 | Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A | 0.80 | 74.0 | 7.01e-01 | 98.8% | 92.0% |
| 7clgA01 | 3.30.870.10 | Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A | 0.76 | 67.0 | 6.36e-01 | 93.2% | 78.9% |
| 4urjD00 | 3.30.870.10 | Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A | 0.76 | 66.0 | 6.48e-01 | 91.9% | 89.7% |
| 7wu1A01 | 3.30.870.10 | Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A | 0.75 | 66.0 | 6.10e-01 | 93.2% | 96.5% |
| 1f0iA02 | 3.30.870.10 | Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A | 0.74 | 70.0 | 5.70e-01 | 100.0% | 89.0% |
| 3hsiA01 | 3.30.870.10 | Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A | 0.74 | 69.0 | 5.99e-01 | 99.4% | 82.5% |
| 3djwA00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.68 | 40.0 | 5.07e-01 | 92.5% | 97.9% |
| 2h36X00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.68 | 40.0 | 4.82e-01 | 93.2% | 87.0% |
| 4ldaB00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 34.0 | 3.81e-01 | 90.7% | 69.3% |
| 3n8bA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 27.0 | 3.85e-01 | 75.8% | 90.7% |
| 4f3nA00 | 3.40.50.12710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 42.0 | 3.20e-01 | 73.9% | 78.9% |
| 1uf3A00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.57 | 44.0 | 3.88e-01 | 78.9% | 90.7% |
| 3gnlA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 43.0 | 4.27e-01 | 77.6% | 94.5% |
| 2pg3A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.56 | 39.0 | 3.55e-01 | 71.4% | 65.5% |
| 2yvtA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.55 | 42.0 | 3.59e-01 | 79.5% | 93.4% |
| 6iheA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 37.0 | 3.97e-01 | 71.4% | 78.6% |
| 1f6kC00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 41.0 | 3.47e-01 | 79.5% | 93.3% |
| 2r8wA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 42.0 | 3.44e-01 | 80.1% | 93.6% |
| 1ygyB03 | 3.30.1330.90 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › D-3-phosphoglycerate dehydrogenase; domain 3 | 0.54 | 39.0 | 4.16e-01 | 78.9% | 85.6% |
| 1fdrA02 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.54 | 42.0 | 4.38e-01 | 93.8% | 88.8% |
| 3lydA01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.52 | 36.0 | 3.87e-01 | 91.3% | 80.3% |
| 4u63A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.52 | 37.0 | 3.69e-01 | 74.5% | 80.5% |
| 2py6A03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 44.0 | 4.23e-01 | 91.3% | 100.0% |
| 4m1bA00 | 3.20.20.370 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase | 0.51 | 40.0 | 3.81e-01 | 85.1% | 89.5% |
| 1yirA00 | 3.20.140.10 | Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase | 0.51 | 40.0 | 3.04e-01 | 83.2% | 37.4% |
| 1j5pA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 34.0 | 3.71e-01 | 91.3% | 83.1% |
| 1w5dA02 | 3.50.80.20 | Alpha Beta › 3-Layer(bba) Sandwich › D-tyrosyl-trna(Tyr) Deacylase; Chain: A; › D-Ala-D-Ala carboxypeptidase C, peptidase S13 | 0.50 | 32.0 | 3.84e-01 | 70.2% | 100.0% |
| 1yh0A02 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.50 | 42.0 | 4.19e-01 | 90.1% | 95.3% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4665980 | 300.1.1.0 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease | 0.80 | 75.0 | 7.23e-01 | 100.0% | 95.6% |
| 5002300 | 300.1.1.10 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PP_kinase_C_1 | 0.78 | 74.0 | 7.18e-01 | 100.0% | 99.4% |
| 5049456 | 300.1.1.0 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease | 0.78 | 63.0 | 6.76e-01 | 94.4% | 96.4% |
| 4423909 | 300.1.1.4 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › FAM83 | 0.77 | 68.0 | 6.27e-01 | 91.9% | 80.5% |
| 3864409 | 300.1.1.4 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › FAM83 | 0.77 | 68.0 | 6.59e-01 | 91.9% | 91.4% |
| 4953116 | 300.1.1.8 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 | 0.77 | 69.0 | 6.25e-01 | 94.4% | 72.9% |
| 4949259 | 300.1.1.8 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 | 0.76 | 68.0 | 6.51e-01 | 94.4% | 84.3% |
| 3844392 | 300.1.1.4 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › FAM83 | 0.76 | 67.0 | 6.36e-01 | 91.9% | 85.4% |
| 4929041 | 300.1.1.0 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease | 0.75 | 63.0 | 6.59e-01 | 93.2% | 94.6% |
| 4931332 | 300.1.1.0 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease | 0.75 | 69.0 | 6.19e-01 | 97.5% | 87.0% |
| 4966080 | 300.1.1.18 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › FilR1_middle | 0.75 | 63.0 | 6.40e-01 | 90.7% | 91.6% |
| 5004402 | 300.1.1.18 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › FilR1_middle | 0.74 | 62.0 | 6.22e-01 | 90.7% | 85.5% |
| 5036368 | 300.1.1.8 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 | 0.74 | 62.0 | 6.26e-01 | 87.6% | 91.3% |
| 4078947 | 300.1.1.8 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 | 0.74 | 64.0 | 5.54e-01 | 91.3% | 69.8% |
| 5019958 | 300.1.1.18 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › FilR1_middle | 0.74 | 62.0 | 6.14e-01 | 90.7% | 85.5% |
| 4985422 | 300.1.1.18 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › FilR1_middle | 0.73 | 61.0 | 6.30e-01 | 90.7% | 91.0% |
| 5019847 | 300.1.1.18 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › FilR1_middle | 0.73 | 62.0 | 6.21e-01 | 90.7% | 86.7% |
| 5018229 | 300.1.1.18 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › FilR1_middle | 0.73 | 62.0 | 6.26e-01 | 91.3% | 89.4% |
| 5002588 | 300.1.1.18 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › FilR1_middle | 0.73 | 61.0 | 6.08e-01 | 90.7% | 85.5% |
| 5019960 | 300.1.1.18 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › FilR1_middle | 0.73 | 61.0 | 5.99e-01 | 90.7% | 82.9% |
| 4962132 | 300.1.1.18 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › FilR1_middle | 0.72 | 61.0 | 6.16e-01 | 90.7% | 89.4% |
| 5005262 | 300.1.1.18 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › FilR1_middle | 0.72 | 60.0 | 6.04e-01 | 90.7% | 84.8% |
| 4953301 | 300.1.1.18 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › FilR1_middle | 0.72 | 60.0 | 6.10e-01 | 90.7% | 88.7% |
| 5003121 | 300.1.1.18 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › FilR1_middle | 0.72 | 60.0 | 6.02e-01 | 90.7% | 86.1% |
| 4959005 | 300.1.1.0 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease | 0.72 | 61.0 | 6.34e-01 | 93.2% | 97.3% |
| 4973918 | 300.1.1.18 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › FilR1_middle | 0.72 | 60.0 | 6.16e-01 | 90.7% | 91.6% |
| 4951107 | 300.1.1.18 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › FilR1_middle | 0.71 | 60.0 | 5.87e-01 | 90.7% | 81.7% |
| 5018421 | 300.1.1.18 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › FilR1_middle | 0.70 | 59.0 | 5.79e-01 | 91.3% | 83.5% |
| 4953299 | 300.1.1.18 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › FilR1_middle | 0.69 | 59.0 | 5.89e-01 | 91.3% | 87.7% |
| 3744021 | 331.9.1.4 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Coatomer_g_Cpla | 0.67 | 35.0 | 4.13e-01 | 83.9% | 72.7% |
| 3193432 | 331.9.1.1 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Alpha_adaptin_C | 0.66 | 35.0 | 3.91e-01 | 84.5% | 65.6% |
| 3228722 | 331.9.1.4 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Coatomer_g_Cpla | 0.65 | 35.0 | 3.80e-01 | 84.5% | 60.7% |
| 4027513 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.62 | 31.0 | 3.64e-01 | 83.9% | 67.0% |
| 3806929 | 331.9.1.1 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Alpha_adaptin_C | 0.61 | 32.0 | 3.57e-01 | 83.2% | 63.2% |
| 5069097 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.59 | 33.0 | 3.68e-01 | 83.9% | 69.2% |
| 2048184 | 2002.1.1.188 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_106 | 0.58 | 32.0 | 3.88e-01 | 73.3% | 81.9% |
| 5027428 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.57 | 38.0 | 3.66e-01 | 83.2% | 57.9% |
| 5000255 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.56 | 40.0 | 3.44e-01 | 72.0% | 79.6% |
| 1822144 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.56 | 37.0 | 3.99e-01 | 90.1% | 77.9% |
| 5044146 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.56 | 40.0 | 3.43e-01 | 72.0% | 67.6% |
| 3288103 | 2005.1.1.72 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PF30635 | 0.53 | 37.0 | 3.98e-01 | 70.2% | 89.6% |
| 5021881 | 2003.1.1.123 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DUF166 | 0.53 | 38.0 | 3.59e-01 | 91.3% | 60.5% |
| 4934246 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.53 | 33.0 | 3.62e-01 | 90.7% | 74.6% |
| 4890171 | 2003.1.1.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Ldh_1_N | 0.53 | 37.0 | 3.91e-01 | 71.4% | 78.8% |
| 3933502 | 7512.1.1.54 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Alg14 | 0.53 | 41.0 | 3.88e-01 | 83.2% | 86.0% |
| 4193972 | 2002.1.1.66 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHquinase_I | 0.52 | 39.0 | 3.48e-01 | 78.9% | 83.5% |
| 1514641 | 2005.1.1.9 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DNA_photolyase | 0.52 | 37.0 | 3.53e-01 | 74.5% | 88.4% |
| 5056903 | 7512.1.1.32 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_1_4 | 0.51 | 39.0 | 3.68e-01 | 79.5% | 85.1% |
| 3958176 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 41.0 | 4.28e-01 | 88.8% | 93.8% |
| 4233743 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.51 | 41.0 | 3.41e-01 | 87.0% | 88.1% |
| 4020236 | 7579.1.1.58 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF829 | 0.51 | 47.0 | 3.86e-01 | 100.0% | 74.3% |
| 4059480 | 881.1.1.37 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PF27270 | 0.50 | 35.0 | 3.44e-01 | 92.5% | 65.7% |