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IMGVR_UViG_3300045988_170622-3300045988-Ga0495776_089014_113818_114159
Arc-VirIMGVR_UViG_3300045988_170622-3300045988-Ga0495776_089014_113818_114159
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-102
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3c4sA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 39.0 | 4.71e-01 | 84.9% | 100.0% |
| 3u1wA01 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 40.0 | 3.19e-01 | 78.5% | 32.2% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 42.0 | 4.83e-01 | 95.7% | 100.0% |
| 1jelP00 | 3.30.1340.10 | Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › HPr-like | 0.62 | 42.0 | 4.40e-01 | 100.0% | 77.6% |
| 2qi2A01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.61 | 48.0 | 4.70e-01 | 100.0% | 77.9% |
| 3mcaB01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.60 | 46.0 | 4.56e-01 | 100.0% | 79.2% |
| 2nvmA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.58 | 40.0 | 3.84e-01 | 86.0% | 62.5% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 39.0 | 4.45e-01 | 96.8% | 100.0% |
| 2nlvA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.57 | 40.0 | 3.79e-01 | 88.2% | 60.7% |
| 2bs6A01 | 2.40.128.190 | Mainly Beta › Beta Barrel › Lipocalin › | 0.56 | 40.0 | 4.17e-01 | 81.7% | 81.0% |
| 1ohfA03 | 2.60.270.70 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › | 0.56 | 49.0 | 4.34e-01 | 100.0% | 95.0% |
| 1sxjH01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.56 | 46.0 | 4.19e-01 | 89.2% | 86.3% |
| 2d73A03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.56 | 43.0 | 4.06e-01 | 100.0% | 67.3% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 39.0 | 4.26e-01 | 96.8% | 100.0% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 39.0 | 4.29e-01 | 91.4% | 100.0% |
| 1o8vA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 43.0 | 3.80e-01 | 87.1% | 97.0% |
| 4k15A00 | 2.60.40.3860 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 42.0 | 3.64e-01 | 84.9% | 63.0% |
| 2cy5A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 46.0 | 4.14e-01 | 98.9% | 99.2% |
| 3esiA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.52 | 40.0 | 3.73e-01 | 86.0% | 95.2% |
| 3qkgA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 44.0 | 3.66e-01 | 97.8% | 93.3% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5039819 | 220.5.1.1 ↗ | beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N | 0.73 | 67.0 | 5.94e-01 | 100.0% | 93.1% |
| 5038444 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.64 | 43.0 | 4.83e-01 | 82.8% | 90.0% |
| 3802643 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.62 | 37.0 | 3.74e-01 | 90.3% | 57.9% |
| 5053224 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 40.0 | 4.69e-01 | 82.8% | 100.0% |
| 4931072 | 4.1.1.139 ↗ | beta barrels › SH3 › SH3 › SH3 › IF5A-like_N | 0.59 | 42.0 | 4.67e-01 | 98.9% | 98.6% |
| 4942589 | 4.1.1.139 ↗ | beta barrels › SH3 › SH3 › SH3 › IF5A-like_N | 0.59 | 42.0 | 4.62e-01 | 94.6% | 98.6% |
| 4063634 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.58 | 45.0 | 4.07e-01 | 92.5% | 61.3% |
| 4946993 | 4.1.1.479 ↗ | beta barrels › SH3 › SH3 › SH3 › eIF-5a | 0.57 | 40.0 | 4.45e-01 | 98.9% | 98.6% |
| 5056886 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.57 | 51.0 | 3.98e-01 | 100.0% | 53.2% |
| 3168583 | 3435.1.1.2 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › CENP-N | 0.56 | 47.0 | 4.24e-01 | 91.4% | 65.4% |
| 1874264 | 6176.1.1.1 ↗ | beta sandwiches › Insertion domain in tetravirus coat protein › Insertion domain in tetravirus coat protein › Insertion domain in tetravirus coat protein › Peptidase_A21 | 0.56 | 49.0 | 4.35e-01 | 100.0% | 95.7% |
| 5061768 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 35.0 | 3.85e-01 | 86.0% | 77.3% |
| 3970718 | 3675.1.1.0 ↗ | a+b complex topology › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain | 0.56 | 49.0 | 4.24e-01 | 97.8% | 72.0% |
| 4429847 | 3675.1.1.1 ↗ | a+b complex topology › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › GyrB_insert | 0.56 | 49.0 | 4.09e-01 | 97.8% | 66.1% |
| 3483489 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 39.0 | 4.17e-01 | 97.8% | 90.7% |
| 4997059 | 4.1.1.139 ↗ | beta barrels › SH3 › SH3 › SH3 › IF5A-like_N | 0.55 | 41.0 | 4.42e-01 | 100.0% | 98.7% |
| 5032977 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 41.0 | 4.41e-01 | 98.9% | 93.8% |
| 4674170 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.55 | 41.0 | 3.85e-01 | 92.5% | 63.3% |
| 4348096 | 3675.1.1.1 ↗ | a+b complex topology › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › GyrB_insert | 0.55 | 47.0 | 3.92e-01 | 95.7% | 64.2% |
| 3660311 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.55 | 37.0 | 3.99e-01 | 93.5% | 81.2% |
| 3643549 | 4.1.1.139 ↗ | beta barrels › SH3 › SH3 › SH3 › IF5A-like_N | 0.54 | 37.0 | 3.92e-01 | 95.7% | 82.5% |
| 4995815 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.54 | 37.0 | 3.41e-01 | 72.0% | 80.0% |
| 3645007 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.54 | 39.0 | 4.08e-01 | 76.3% | 89.4% |
| 3864513 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 48.0 | 4.34e-01 | 100.0% | 96.8% |
| 5022924 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 39.0 | 4.22e-01 | 88.2% | 90.0% |
| 5081345 | 11.1.1.608 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Por_Secre_tail | 0.53 | 36.0 | 3.90e-01 | 98.9% | 84.8% |
| 3521199 | 220.1.1.26 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Vps36_ESCRT-II | 0.53 | 47.0 | 4.21e-01 | 100.0% | 88.5% |
| 5051954 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 38.0 | 4.05e-01 | 83.9% | 90.0% |
| 3906073 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 45.0 | 4.33e-01 | 96.8% | 91.4% |
| 3246120 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.52 | 45.0 | 3.64e-01 | 98.9% | 86.2% |
| 3878638 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 38.0 | 3.94e-01 | 97.8% | 84.7% |
| 5033073 | 3414.1.1.13 ↗ | beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › PF29994 | 0.51 | 40.0 | 4.03e-01 | 83.9% | 85.3% |
| 5052285 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 42.0 | 4.10e-01 | 94.6% | 81.0% |
| 3838288 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 37.0 | 3.49e-01 | 77.4% | 96.5% |
| 3865163 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 39.0 | 3.16e-01 | 100.0% | 43.4% |
| 5059407 | 11.1.1.284 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 | 0.51 | 40.0 | 4.06e-01 | 83.9% | 87.8% |
| 3903626 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.51 | 37.0 | 2.87e-01 | 100.0% | 34.3% |
| 3913149 | 216.1.1.3 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UEV | 0.51 | 38.0 | 3.28e-01 | 83.9% | 50.0% |
| 3504139 | 209.1.1.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like | 0.50 | 42.0 | 3.54e-01 | 95.7% | 81.2% |
| 4500974 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.50 | 31.0 | 2.91e-01 | 81.7% | 47.5% |