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IMGVR_UViG_3300045988_170622-3300045988-Ga0495776_089014_115870_116121
Arc-VirIMGVR_UViG_3300045988_170622-3300045988-Ga0495776_089014_115870_116121
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-79
Domain cluster:
representative
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ou8A00 | 2.30.30.220 | Mainly Beta › Roll › SH3 type barrels. › SspB-like | 0.75 | 62.0 | 5.65e-01 | 91.0% | 84.9% |
| 3gmgA00 | 3.30.70.1880 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Protein of unknown function DUF881 | 0.68 | 57.0 | 4.69e-01 | 100.0% | 51.0% |
| 1sg5A01 | 2.30.30.400 | Mainly Beta › Roll › SH3 type barrels. › Rof-like | 0.65 | 52.0 | 5.24e-01 | 89.7% | 88.3% |
| 1ohfA03 | 2.60.270.70 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › | 0.64 | 57.0 | 4.70e-01 | 100.0% | 92.9% |
| 3c4sA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 44.0 | 4.94e-01 | 83.3% | 100.0% |
| 1vw4M01 | 2.30.30.790 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 51.0 | 4.34e-01 | 93.6% | 65.2% |
| 3na2A00 | 3.40.1570.20 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › | 0.61 | 48.0 | 4.09e-01 | 89.7% | 70.3% |
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.60 | 47.0 | 5.00e-01 | 94.9% | 100.0% |
| 2qi2A01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.60 | 52.0 | 4.77e-01 | 100.0% | 76.0% |
| 4jzjC03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 41.0 | 4.28e-01 | 100.0% | 78.6% |
| 1p6pA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 42.0 | 3.61e-01 | 74.4% | 100.0% |
| 1u7bA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.58 | 48.0 | 3.35e-01 | 89.7% | 40.6% |
| 3a1jB00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.58 | 48.0 | 3.30e-01 | 89.7% | 37.9% |
| 3obyA01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.58 | 49.0 | 4.54e-01 | 100.0% | 72.5% |
| 2rcqA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 43.0 | 3.58e-01 | 79.5% | 95.0% |
| 1sxjH02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.57 | 47.0 | 4.01e-01 | 89.7% | 82.0% |
| 1lfoA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 40.0 | 3.45e-01 | 74.4% | 100.0% |
| 6i8xA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 41.0 | 3.31e-01 | 76.9% | 93.3% |
| 3fm2A00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.56 | 45.0 | 3.90e-01 | 92.3% | 80.5% |
| 1yprA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.56 | 39.0 | 3.38e-01 | 89.7% | 45.6% |
| 4l2iB00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.55 | 47.0 | 3.32e-01 | 97.4% | 28.9% |
| 4trtA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.55 | 44.0 | 3.78e-01 | 85.9% | 86.9% |
| 1ex4B02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.55 | 37.0 | 4.03e-01 | 74.4% | 91.5% |
| 2kheA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.55 | 33.0 | 3.17e-01 | 74.4% | 50.6% |
| 6frlA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 42.0 | 2.58e-01 | 82.1% | 72.1% |
| 1vq8Q00 | 2.30.30.70 | Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 | 0.54 | 44.0 | 4.17e-01 | 93.6% | 75.8% |
| 2fg9A01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 46.0 | 3.67e-01 | 94.9% | 90.6% |
| 5w7zA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.54 | 43.0 | 3.81e-01 | 85.9% | 93.8% |
| 2qmiA02 | 2.40.128.210 | Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain | 0.53 | 44.0 | 4.08e-01 | 91.0% | 91.0% |
| 2r16A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 46.0 | 3.61e-01 | 100.0% | 74.3% |
| 3u12A00 | 2.30.29.180 | Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain | 0.52 | 39.0 | 3.58e-01 | 82.1% | 59.6% |
| 6mv2A01 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 39.0 | 3.55e-01 | 98.7% | 59.8% |
| 2bhzA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.52 | 32.0 | 3.29e-01 | 98.7% | 65.3% |
| 1vpkA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.52 | 43.0 | 3.72e-01 | 89.7% | 82.5% |
| 1efpB00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.52 | 43.0 | 3.15e-01 | 97.4% | 70.7% |
| 2kieA00 | 2.30.29.110 | Mainly Beta › Roll › PH-domain like › | 0.51 | 40.0 | 3.40e-01 | 82.1% | 68.5% |
| 1cbiA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 40.0 | 3.39e-01 | 85.9% | 97.1% |
| 1bbuA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 37.0 | 3.06e-01 | 75.6% | 91.4% |
| 3db0B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 39.0 | 3.45e-01 | 85.9% | 99.2% |
| 1ebdA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 45.0 | 3.91e-01 | 100.0% | 88.4% |
| 2p4bB02 | 3.30.200.100 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › MucB/RseB, C-terminal domain | 0.51 | 37.0 | 3.46e-01 | 76.9% | 100.0% |
| 2egcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.50 | 36.0 | 3.69e-01 | 76.9% | 84.0% |
| 3cp3A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.50 | 43.0 | 3.67e-01 | 96.2% | 96.1% |
ECOD (55)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4970754 | 220.5.1.1 ↗ | beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N | 0.78 | 70.0 | 6.05e-01 | 100.0% | 95.0% |
| 4638794 | 220.5.1.1 ↗ | beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N | 0.76 | 68.0 | 5.79e-01 | 100.0% | 91.2% |
| 5000207 | 220.5.1.1 ↗ | beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N | 0.76 | 68.0 | 5.82e-01 | 100.0% | 90.4% |
| 165392 | 4.1.2.1 ↗ | beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › SspB | 0.72 | 61.0 | 5.34e-01 | 94.9% | 81.7% |
| 4010681 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.70 | 58.0 | 5.39e-01 | 93.6% | 73.7% |
| 3328647 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.69 | 56.0 | 5.51e-01 | 100.0% | 81.2% |
| 3598125 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 50.0 | 5.14e-01 | 84.6% | 82.7% |
| 4168737 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 56.0 | 5.74e-01 | 100.0% | 97.3% |
| 4141828 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.66 | 55.0 | 5.69e-01 | 100.0% | 97.3% |
| 3281945 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.63 | 54.0 | 5.20e-01 | 97.4% | 82.2% |
| 3602511 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 48.0 | 4.99e-01 | 98.7% | 91.4% |
| 5067673 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 38.0 | 4.16e-01 | 100.0% | 73.8% |
| 4952060 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.61 | 44.0 | 4.87e-01 | 82.1% | 98.3% |
| 3514672 | 1.1.5.31 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 | 0.60 | 50.0 | 3.98e-01 | 92.3% | 94.4% |
| 5058197 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.59 | 41.0 | 4.16e-01 | 94.9% | 71.8% |
| 3977990 | 1.1.5.31 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 | 0.59 | 50.0 | 3.97e-01 | 93.6% | 93.1% |
| 4147605 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.58 | 45.0 | 3.25e-01 | 100.0% | 27.6% |
| 4993868 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.57 | 41.0 | 4.23e-01 | 98.7% | 79.5% |
| 3556710 | 9.1.1.24 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_7 | 0.57 | 42.0 | 3.60e-01 | 78.2% | 100.0% |
| 4964178 | 319.1.1.29 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › DUF7127 | 0.57 | 41.0 | 4.29e-01 | 97.4% | 80.8% |
| 4961460 | 5.1.4.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 | 0.57 | 46.0 | 3.01e-01 | 91.0% | 89.3% |
| 3787756 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.56 | 46.0 | 3.65e-01 | 88.5% | 93.0% |
| 4927889 | 319.1.1.4 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 | 0.55 | 44.0 | 4.48e-01 | 97.4% | 86.7% |
| 4930399 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.55 | 39.0 | 3.11e-01 | 96.2% | 35.8% |
| 3509387 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.55 | 44.0 | 3.80e-01 | 85.9% | 86.7% |
| 5074343 | 319.1.1.23 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF29697 | 0.55 | 40.0 | 4.16e-01 | 97.4% | 81.3% |
| 4527067 | 206.1.3.40 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATPgrasp_YheCD | 0.55 | 48.0 | 3.40e-01 | 100.0% | 32.5% |
| 4947901 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.55 | 41.0 | 3.92e-01 | 97.4% | 67.7% |
| 5025993 | 2005.1.1.10 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ETF | 0.55 | 46.0 | 3.30e-01 | 97.4% | 29.8% |
| 3707878 | 5.1.2.33 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BNR_3 | 0.54 | 46.0 | 3.09e-01 | 91.0% | 36.1% |
| 5002276 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.54 | 40.0 | 4.06e-01 | 96.2% | 80.0% |
| 4943092 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.54 | 41.0 | 3.39e-01 | 96.2% | 45.9% |
| 4514555 | 1.1.5.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › FMN_bind_2 | 0.54 | 47.0 | 3.53e-01 | 97.4% | 94.9% |
| 5005273 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.54 | 38.0 | 3.73e-01 | 96.2% | 67.0% |
| 4291120 | 10.21.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 | 0.54 | 47.0 | 4.00e-01 | 100.0% | 68.1% |
| 4967968 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.54 | 40.0 | 3.60e-01 | 97.4% | 58.1% |
| 4959499 | 2003.1.2.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox | 0.54 | 43.0 | 3.99e-01 | 87.2% | 100.0% |
| 5005241 | 319.1.1.3 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS | 0.54 | 39.0 | 3.81e-01 | 96.2% | 69.3% |
| 4105812 | 10.1.1.26 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C | 0.54 | 46.0 | 3.88e-01 | 100.0% | 79.1% |
| 4983064 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.53 | 42.0 | 3.66e-01 | 87.2% | 91.9% |
| 4390303 | 5.1.3.238 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF29568 | 0.53 | 46.0 | 2.71e-01 | 93.6% | 18.8% |
| 4337242 | 2005.1.1.10 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ETF | 0.53 | 45.0 | 3.25e-01 | 97.4% | 49.4% |
| 4947251 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.53 | 38.0 | 3.37e-01 | 97.4% | 52.2% |
| 5004113 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.53 | 39.0 | 3.97e-01 | 96.2% | 81.3% |
| 5031493 | 319.1.1.23 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF29697 | 0.53 | 39.0 | 3.91e-01 | 96.2% | 78.2% |
| 5035122 | 319.1.1.23 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF29697 | 0.53 | 38.0 | 3.10e-01 | 96.2% | 39.4% |
| 3511375 | 4.1.1.349 ↗ | beta barrels › SH3 › SH3 › SH3 › ROF | 0.52 | 42.0 | 4.15e-01 | 91.0% | 85.9% |
| 3479505 | 10.21.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 | 0.52 | 45.0 | 3.67e-01 | 100.0% | 55.5% |
| 4027872 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 41.0 | 3.92e-01 | 88.5% | 81.1% |
| 5016447 | 884.1.1.1 ↗ | a+b two layers › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › CobW_C | 0.52 | 40.0 | 4.00e-01 | 100.0% | 81.2% |
| 4188283 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.51 | 39.0 | 3.92e-01 | 97.4% | 80.0% |
| 3591534 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.51 | 39.0 | 3.36e-01 | 83.3% | 88.8% |
| 3964304 | 884.1.1.1 ↗ | a+b two layers › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › CobW_C | 0.51 | 40.0 | 3.93e-01 | 100.0% | 79.5% |
| 3396193 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.51 | 41.0 | 3.52e-01 | 100.0% | 53.8% |
| 2033770 | 12.3.1.32 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › SOGP_2nd | 0.51 | 42.0 | 2.94e-01 | 93.6% | 35.2% |