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IMGVR_UViG_3300045988_170622-3300045988-Ga0495776_089014_95631_96284
Arc-VirIMGVR_UViG_3300045988_170622-3300045988-Ga0495776_089014_95631_96284
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-88
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3n8hA02 | 3.30.1300.10 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain | 0.74 | 36.0 | 3.85e-01 | 81.8% | 53.9% |
| 2e7gA01 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.66 | 51.0 | 4.80e-01 | 81.8% | 90.6% |
| 3tr3A00 | 3.30.300.90 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › BolA-like | 0.65 | 50.0 | 5.30e-01 | 80.7% | 96.1% |
| 3tufA00 | 1.10.287.4300 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Stage III sporulation protein AH-like | 0.64 | 47.0 | 4.32e-01 | 78.4% | 60.9% |
| 3c18A01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.61 | 49.0 | 4.53e-01 | 87.5% | 73.0% |
| 4ftfA00 | 3.30.300.250 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.60 | 48.0 | 4.51e-01 | 88.6% | 87.2% |
| 3cskA03 | 3.30.70.2600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 44.0 | 4.61e-01 | 85.2% | 94.7% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 44.0 | 4.67e-01 | 84.1% | 98.7% |
| 1qf6A02 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.55 | 45.0 | 4.23e-01 | 88.6% | 78.3% |
| 3kewB02 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.55 | 42.0 | 3.63e-01 | 84.1% | 87.5% |
| 3kdrA02 | 3.40.140.120 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › | 0.52 | 35.0 | 3.07e-01 | 88.6% | 47.2% |
| 8a9xA01 | 3.30.1360.100 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM | 0.52 | 37.0 | 3.98e-01 | 76.1% | 94.7% |
| 1uv7A00 | 3.30.1360.100 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM | 0.51 | 37.0 | 3.97e-01 | 80.7% | 90.8% |
| 3jamD02 | 3.30.1140.32 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain | 0.51 | 39.0 | 3.43e-01 | 81.8% | 60.9% |
| 3hbvP01 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.51 | 43.0 | 3.83e-01 | 98.9% | 84.1% |
| 6ks6B02 | 3.30.260.10 | Alpha Beta › 2-Layer Sandwich › GROEL; domain 2 › TCP-1-like chaperonin intermediate domain | 0.50 | 35.0 | 3.18e-01 | 71.6% | 97.5% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3285351 | 316.1.1.54 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › RlaP | 0.77 | 67.0 | 5.72e-01 | 92.0% | 68.9% |
| 4927059 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.73 | 54.0 | 5.83e-01 | 77.3% | 100.0% |
| 5070009 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.70 | 50.0 | 5.74e-01 | 76.1% | 100.0% |
| 5036986 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.70 | 46.0 | 5.47e-01 | 72.7% | 100.0% |
| 3203393 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.68 | 48.0 | 5.43e-01 | 86.4% | 100.0% |
| 3199492 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.68 | 51.0 | 5.47e-01 | 90.9% | 93.3% |
| 3958648 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.66 | 50.0 | 5.35e-01 | 79.5% | 96.0% |
| 3958647 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.66 | 48.0 | 5.23e-01 | 77.3% | 95.7% |
| 4932655 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.64 | 46.0 | 5.16e-01 | 80.7% | 100.0% |
| 4951627 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.64 | 44.0 | 4.84e-01 | 83.0% | 90.0% |
| 5049864 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.64 | 53.0 | 4.62e-01 | 89.8% | 77.7% |
| 3987572 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 44.0 | 3.83e-01 | 71.6% | 54.1% |
| 4976993 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.63 | 50.0 | 4.38e-01 | 88.6% | 95.0% |
| 4980728 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.62 | 45.0 | 4.94e-01 | 79.5% | 97.1% |
| 4282602 | 327.4.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N | 0.61 | 49.0 | 4.95e-01 | 87.5% | 98.9% |
| 3962900 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.61 | 45.0 | 4.93e-01 | 78.4% | 98.6% |
| 3658648 | 2498.1.1.11 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48,Peptidase_M48_N | 0.61 | 47.0 | 3.04e-01 | 80.7% | 20.8% |
| 4365869 | 327.11.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 | 0.61 | 43.0 | 4.89e-01 | 75.0% | 100.0% |
| 5057362 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.61 | 43.0 | 4.21e-01 | 73.9% | 70.5% |
| 4933516 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.61 | 44.0 | 4.86e-01 | 83.0% | 97.1% |
| 5054316 | 327.11.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 | 0.60 | 47.0 | 5.05e-01 | 87.5% | 98.7% |
| 4992158 | 327.18.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A | 0.60 | 45.0 | 4.39e-01 | 78.4% | 75.8% |
| 5073199 | 327.18.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A | 0.60 | 42.0 | 4.30e-01 | 73.9% | 84.7% |
| 4972425 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.60 | 42.0 | 4.64e-01 | 73.9% | 100.0% |
| 4990333 | 3613.1.1.0 ↗ | beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain | 0.59 | 49.0 | 4.17e-01 | 88.6% | 72.9% |
| 4970990 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.59 | 49.0 | 3.18e-01 | 90.9% | 23.7% |
| 3717020 | 63.1.1.0 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain | 0.59 | 38.0 | 3.04e-01 | 71.6% | 31.4% |
| 4995089 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.59 | 42.0 | 3.48e-01 | 76.1% | 65.5% |
| 4934961 | 327.10.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related | 0.58 | 44.0 | 4.22e-01 | 81.8% | 73.3% |
| 4951625 | 3261.1.1.0 ↗ | a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb | 0.58 | 44.0 | 4.53e-01 | 80.7% | 85.9% |
| 3439658 | 327.10.1.9 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N-like_STI | 0.58 | 40.0 | 4.23e-01 | 70.5% | 100.0% |
| 4986455 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.58 | 46.0 | 3.17e-01 | 85.2% | 67.1% |
| 185139 | 2498.1.1.23 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M49 | 0.58 | 43.0 | 2.59e-01 | 80.7% | 10.4% |
| 3626665 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.58 | 50.0 | 4.91e-01 | 94.3% | 94.7% |
| 5028517 | 327.18.1.5 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A › KH_2 | 0.58 | 43.0 | 4.19e-01 | 78.4% | 75.8% |
| 3613411 | 63.1.1.0 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain | 0.57 | 40.0 | 3.33e-01 | 72.7% | 94.7% |
| 4021217 | 316.1.1.1 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PolyA_pol | 0.56 | 46.0 | 3.73e-01 | 90.9% | 82.9% |
| 5001172 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.55 | 41.0 | 3.91e-01 | 79.5% | 96.2% |
| 4010403 | 310.3.1.2 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › T2SSM | 0.54 | 43.0 | 4.31e-01 | 87.5% | 86.0% |
| 5079727 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 44.0 | 3.49e-01 | 88.6% | 98.9% |
| 5048872 | 327.10.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related | 0.53 | 43.0 | 3.84e-01 | 87.5% | 72.8% |
| 5002667 | 131.1.1.15 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › Ppx-GppA_III | 0.53 | 41.0 | 3.24e-01 | 84.1% | 85.0% |
| 3259379 | 316.1.1.5 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › RsfS | 0.52 | 46.0 | 4.14e-01 | 100.0% | 82.4% |
| 4219518 | 63.1.1.5 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › ATG27 | 0.52 | 39.0 | 3.24e-01 | 79.5% | 45.0% |
| 4977467 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.51 | 40.0 | 3.80e-01 | 85.2% | 73.3% |
| 3784905 | 4099.1.1.5 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Csm1 | 0.51 | 35.0 | 3.21e-01 | 77.3% | 51.2% |
| 3604617 | 3613.1.1.0 ↗ | beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain | 0.51 | 42.0 | 3.64e-01 | 89.8% | 81.5% |
D2
medium
residues 121-186
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hsbA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.69 | 60.0 | 4.92e-01 | 100.0% | 96.0% |
| 1a7eA00 | 1.20.120.50 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like | 0.68 | 58.0 | 4.90e-01 | 100.0% | 74.6% |
| 2jx0A00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.67 | 58.0 | 4.74e-01 | 100.0% | 76.3% |
| 1fs0G02 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.65 | 44.0 | 4.05e-01 | 100.0% | 52.8% |
| 7oq4Z01 | 1.20.120.950 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein DUF5062 | 0.64 | 53.0 | 4.70e-01 | 93.9% | 92.9% |
| 1gs0A01 | 1.20.142.10 | Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › Poly(ADP-ribose) polymerase, regulatory domain | 0.63 | 50.0 | 4.08e-01 | 100.0% | 45.7% |
| 3iylB02 | 1.10.2050.10 | Mainly Alpha › Orthogonal Bundle › Protein mu-1, chain B, domain 3 › Protein mu-1, chain B, domain 3 | 0.63 | 54.0 | 4.35e-01 | 100.0% | 90.3% |
| 1j1jA02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.63 | 43.0 | 3.98e-01 | 100.0% | 56.5% |
| 1oxjA02 | 1.25.40.170 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Smaug, PHAT domain | 0.60 | 41.0 | 3.54e-01 | 71.2% | 97.2% |
| 1bgcA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.59 | 50.0 | 3.91e-01 | 100.0% | 84.2% |
| 5mq1A00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.58 | 41.0 | 3.57e-01 | 75.8% | 67.6% |
| 1irxA04 | 1.10.10.770 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.58 | 37.0 | 3.19e-01 | 100.0% | 39.8% |
| 5nl6A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 44.0 | 3.77e-01 | 81.8% | 82.4% |
| 1j8yF01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.56 | 47.0 | 4.40e-01 | 95.5% | 93.0% |
| 1zoyA03 | 1.20.58.100 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain | 0.56 | 41.0 | 3.45e-01 | 78.8% | 69.2% |
| 4hwhE00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.56 | 42.0 | 3.91e-01 | 83.3% | 85.2% |
| 3a7mA01 | 1.20.58.380 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. | 0.56 | 50.0 | 4.12e-01 | 95.5% | 60.9% |
| 2jbwA01 | 1.20.1440.110 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase | 0.56 | 41.0 | 3.61e-01 | 80.3% | 64.1% |
| 2odvA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 45.0 | 3.78e-01 | 89.4% | 78.6% |
| 1m62A00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.55 | 45.0 | 4.12e-01 | 89.4% | 77.0% |
| 7odyC01 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.55 | 34.0 | 3.12e-01 | 100.0% | 45.7% |
| 5jcpB01 | 1.10.555.10 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein | 0.54 | 42.0 | 3.06e-01 | 100.0% | 29.2% |
| 3hgkE00 | 1.20.1280.110 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.54 | 44.0 | 4.25e-01 | 100.0% | 79.2% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 39.0 | 3.58e-01 | 81.8% | 94.6% |
| 1hbkA00 | 1.20.80.10 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.53 | 38.0 | 3.56e-01 | 80.3% | 61.8% |
| 1cf7B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 36.0 | 3.39e-01 | 72.7% | 63.4% |
| 2qv0A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 43.0 | 3.55e-01 | 92.4% | 99.2% |
| 3zukA01 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.51 | 39.0 | 2.54e-01 | 83.3% | 85.1% |
| 4ztkA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.51 | 43.0 | 2.95e-01 | 98.5% | 50.7% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3385780 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.83 | 76.0 | 6.04e-01 | 100.0% | 73.6% |
| 3783886 | 109.4.1.109 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sel1 | 0.72 | 52.0 | 3.59e-01 | 75.8% | 44.7% |
| 3625044 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.72 | 48.0 | 4.07e-01 | 98.5% | 42.9% |
| 3932534 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.68 | 53.0 | 4.66e-01 | 83.3% | 82.1% |
| 4984545 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.67 | 58.0 | 5.30e-01 | 100.0% | 93.3% |
| 3622960 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.66 | 47.0 | 3.87e-01 | 77.3% | 73.1% |
| 3341807 | 604.3.1.1 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG | 0.65 | 48.0 | 4.01e-01 | 78.8% | 70.0% |
| 3768254 | 604.3.1.1 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG | 0.64 | 53.0 | 4.68e-01 | 89.4% | 71.6% |
| 3824761 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.64 | 38.0 | 3.79e-01 | 97.0% | 57.1% |
| 3907213 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.62 | 50.0 | 4.35e-01 | 86.4% | 88.0% |
| 3304245 | 219.1.1.71 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › PDDEXK_6 | 0.62 | 45.0 | 3.22e-01 | 75.8% | 96.8% |
| 3706903 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.62 | 55.0 | 4.18e-01 | 98.5% | 62.7% |
| 3803972 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.61 | 52.0 | 5.15e-01 | 97.0% | 92.9% |
| 3935012 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.60 | 48.0 | 3.13e-01 | 86.4% | 88.6% |
| 5006230 | 244.3.1.7 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › DUF166 | 0.60 | 39.0 | 3.70e-01 | 100.0% | 55.0% |
| 3937288 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.60 | 51.0 | 4.75e-01 | 100.0% | 87.1% |
| 3378485 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.60 | 40.0 | 2.65e-01 | 72.7% | 17.4% |
| 3703277 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.59 | 47.0 | 4.61e-01 | 86.4% | 98.6% |
| 3286103 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.58 | 41.0 | 3.97e-01 | 78.8% | 98.8% |
| 3600177 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 50.0 | 3.27e-01 | 95.5% | 42.5% |
| 3595029 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.57 | 44.0 | 3.72e-01 | 83.3% | 77.3% |
| 3685185 | 192.17.1.10 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like › eIF-3c_N | 0.56 | 47.0 | 3.90e-01 | 93.9% | 85.8% |
| 3797597 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.56 | 43.0 | 3.80e-01 | 84.8% | 81.0% |
| 3510900 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.56 | 50.0 | 3.51e-01 | 100.0% | 64.8% |
| 3547040 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.55 | 40.0 | 2.97e-01 | 100.0% | 30.0% |
| 3526937 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.55 | 43.0 | 3.44e-01 | 86.4% | 68.6% |
| 3651529 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.54 | 45.0 | 3.48e-01 | 95.5% | 57.0% |
| 3209404 | 604.1.1.129 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › DUF6604 | 0.54 | 39.0 | 3.44e-01 | 77.3% | 94.0% |
| 3487914 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.54 | 41.0 | 3.46e-01 | 98.5% | 47.8% |
| 4105792 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.54 | 46.0 | 3.28e-01 | 97.0% | 98.1% |
| 3217176 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.53 | 38.0 | 3.22e-01 | 74.2% | 94.5% |
| 3347110 | 3684.1.1.2 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › BPS1 | 0.53 | 42.0 | 2.96e-01 | 92.4% | 65.8% |
| 3787849 | 103.1.1.57 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › GDH2_N | 0.53 | 40.0 | 3.57e-01 | 84.8% | 56.8% |
| 4935180 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.53 | 38.0 | 3.33e-01 | 100.0% | 51.0% |
| 3635704 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.51 | 42.0 | 3.26e-01 | 93.9% | 66.9% |
| 4985507 | 604.10.1.0 ↗ | alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac | 0.51 | 40.0 | 3.70e-01 | 89.4% | 80.0% |
| 1871787 | 3718.1.1.1 ↗ | alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT › FliT | 0.51 | 44.0 | 3.65e-01 | 100.0% | 79.5% |