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IMGVR_UViG_3300045988_178991-3300045988-Ga0495776_136811_57827_58510
Arc-VirIMGVR_UViG_3300045988_178991-3300045988-Ga0495776_136811_57827_58510
Identity
- Kingdom:
- archaea
Quality
44.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-117
D2
high
residues 164-225
Domain cluster:
rep: MW388005.1__QQO39020.1__X__00046__D8-66
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01471.24 best | PG_binding_1 | 63.8 | 1.90e-17 | 98.4% | 94.7% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4c2dA02 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.96 | 83.0 | 7.29e-01 | 100.0% | 65.9% |
| 4g54A02 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.92 | 79.0 | 7.43e-01 | 100.0% | 77.8% |
| 1lbuA01 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.90 | 80.0 | 7.10e-01 | 100.0% | 69.0% |
| 1ck7A01 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.83 | 65.0 | 4.30e-01 | 96.8% | 22.1% |
| 7aj9A01 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.83 | 71.0 | 6.91e-01 | 100.0% | 86.6% |
| 1eakA01 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.82 | 66.0 | 6.57e-01 | 98.4% | 84.1% |
| 1rt8A04 | 1.10.418.10 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain | 0.60 | 50.0 | 4.30e-01 | 100.0% | 69.7% |
| 2chnB03 | 1.20.58.460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like | 0.58 | 47.0 | 3.37e-01 | 88.7% | 49.4% |
| 4rw0A00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.56 | 40.0 | 2.94e-01 | 77.4% | 75.5% |
| 4ow8A02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.50 | 42.0 | 3.11e-01 | 98.4% | 42.2% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3291401 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 1.00 | 87.0 | 7.60e-01 | 100.0% | 65.9% |
| 3959835 | 144.1.1.0 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like | 0.99 | 87.0 | 8.23e-01 | 100.0% | 80.0% |
| 1498420 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.98 | 84.0 | 7.68e-01 | 100.0% | 72.4% |
| 4032027 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.95 | 82.0 | 7.22e-01 | 100.0% | 65.9% |
| 4117418 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.95 | 79.0 | 8.12e-01 | 96.8% | 90.0% |
| 4380775 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.94 | 79.0 | 5.32e-01 | 100.0% | 27.5% |
| 5019285 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.94 | 84.0 | 7.05e-01 | 100.0% | 61.1% |
| 2859574 | 144.1.1.0 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like | 0.93 | 77.0 | 7.31e-01 | 100.0% | 76.1% |
| 4312892 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.92 | 78.0 | 7.98e-01 | 100.0% | 91.7% |
| 4055540 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.92 | 79.0 | 7.56e-01 | 100.0% | 81.2% |
| 4173379 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.92 | 81.0 | 7.36e-01 | 100.0% | 72.5% |
| 224034 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.92 | 79.0 | 7.07e-01 | 100.0% | 69.1% |
| 3395 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.90 | 80.0 | 7.13e-01 | 100.0% | 69.9% |
| 1877329 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.90 | 76.0 | 7.07e-01 | 100.0% | 73.7% |
| 4473649 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.90 | 85.0 | 7.48e-01 | 100.0% | 72.9% |
| 3299326 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.90 | 78.0 | 7.67e-01 | 100.0% | 87.7% |
| 3274761 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.90 | 85.0 | 5.98e-01 | 100.0% | 40.6% |
| 3319740 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.89 | 78.0 | 6.91e-01 | 100.0% | 68.2% |
| 3332533 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.89 | 79.0 | 6.54e-01 | 100.0% | 58.0% |
| 3356981 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.88 | 79.0 | 7.11e-01 | 100.0% | 73.8% |
| 3302194 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.86 | 78.0 | 6.62e-01 | 100.0% | 63.2% |
| 3772398 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.85 | 76.0 | 6.92e-01 | 100.0% | 73.8% |
| 3955223 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.85 | 81.0 | 7.31e-01 | 100.0% | 82.5% |
| 3957237 | 144.1.1.0 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like | 0.85 | 81.0 | 7.50e-01 | 100.0% | 88.0% |
| 3539881 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.84 | 72.0 | 6.73e-01 | 100.0% | 76.0% |
| 3299934 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.84 | 75.0 | 6.21e-01 | 100.0% | 57.1% |
| 3221065 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.83 | 75.0 | 7.00e-01 | 96.8% | 86.7% |
| 2819638 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.82 | 71.0 | 5.72e-01 | 100.0% | 50.9% |
| 3893524 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.81 | 71.0 | 6.79e-01 | 96.8% | 82.9% |
| 4600634 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.81 | 69.0 | 7.01e-01 | 96.8% | 95.0% |
| 3933825 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.81 | 73.0 | 6.81e-01 | 98.4% | 81.3% |
| 3930763 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.80 | 74.0 | 6.88e-01 | 100.0% | 81.3% |
| 3994858 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.80 | 71.0 | 6.49e-01 | 100.0% | 73.8% |
| 3537259 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.80 | 72.0 | 6.52e-01 | 100.0% | 75.0% |
| 3222017 | 144.1.1.0 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like | 0.80 | 73.0 | 6.36e-01 | 100.0% | 70.0% |
| 4857662 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.78 | 64.0 | 6.16e-01 | 98.4% | 77.5% |
| 3764906 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.78 | 69.0 | 6.27e-01 | 100.0% | 73.8% |
| 4160453 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.78 | 67.0 | 6.40e-01 | 96.8% | 81.4% |
| 3621525 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.77 | 70.0 | 6.50e-01 | 96.8% | 89.3% |
| 3765966 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.77 | 68.0 | 6.04e-01 | 100.0% | 69.4% |
| 3772718 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.77 | 69.0 | 6.15e-01 | 98.4% | 70.6% |
| 3796801 | 2007.2.3.36 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase, DSPn, Tc-R-P | 0.52 | 42.0 | 2.99e-01 | 98.4% | 59.1% |
| 3415030 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.50 | 39.0 | 3.41e-01 | 85.5% | 58.0% |