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IMGVR_UViG_3300045988_178991-3300045988-Ga0495776_136811_61964_62551

Arc-Vir

IMGVR_UViG_3300045988_178991-3300045988-Ga0495776_136811_61964_62551

Quality

65.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-107
PDB
D2 high residues 117-188
PDB
Domain cluster: representative
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3u1wA01 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.72 45.0 3.33e-01 95.8% 25.1%
2bs6A01 2.40.128.190 Mainly Beta › Beta Barrel › Lipocalin › 0.70 56.0 5.39e-01 100.0% 76.2%
1k32A01 2.120.10.60 Mainly Beta › 6 Propeller › Neuraminidase › Tricorn protease N-terminal domain 0.68 54.0 3.63e-01 100.0% 22.8%
1yr2A02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.68 55.0 3.55e-01 100.0% 19.3%
2bklA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.66 54.0 3.50e-01 100.0% 19.5%
1g29102 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 38.0 4.51e-01 100.0% 91.1%
2f5kA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 41.0 4.75e-01 91.7% 92.0%
1fr3A00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.65 40.0 4.20e-01 76.4% 67.2%
1c5kA02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.65 52.0 3.60e-01 100.0% 24.4%
1azpA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 41.0 4.29e-01 88.9% 69.7%
1xipA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 55.0 3.57e-01 100.0% 22.3%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 38.0 4.05e-01 100.0% 70.5%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 40.0 4.19e-01 94.4% 70.8%
3tw6D02 3.10.600.10 Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain 0.63 48.0 4.72e-01 86.1% 76.3%
3h3hB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 57.0 4.76e-01 100.0% 85.0%
4csdB00 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.61 53.0 3.64e-01 100.0% 99.6%
3c1aA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.60 43.0 3.46e-01 76.4% 44.8%
7pjjA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 47.0 3.92e-01 87.5% 82.3%
1mknA00 2.20.60.10 Mainly Beta › Single Sheet › Heparin-binding Growth Factor, Midkine; Chain A › Pleiotrophin/Midkine, N-terminal domain 0.59 35.0 3.80e-01 90.3% 71.2%
4fnvA02 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.58 49.0 3.42e-01 100.0% 50.0%
1kmdA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.58 41.0 3.59e-01 76.4% 69.2%
3fkaB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 52.0 4.36e-01 100.0% 85.8%
4hntA04 3.10.600.10 Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain 0.57 46.0 4.09e-01 86.1% 87.1%
1uhzA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 42.0 3.90e-01 84.7% 62.9%
3b77A01 2.30.29.50 Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain 0.57 40.0 3.61e-01 97.2% 53.0%
1x49A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 33.0 3.38e-01 100.0% 58.6%
6f95A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.56 49.0 3.94e-01 100.0% 63.5%
1zc0A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.55 45.0 2.94e-01 86.1% 25.5%
4a18P00 3.30.720.90 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.55 37.0 3.84e-01 79.2% 75.8%
1noyA01 3.30.342.10 Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 0.54 48.0 3.96e-01 100.0% 69.4%
6p3lA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 48.0 4.14e-01 100.0% 82.6%
4ikcA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.54 44.0 2.92e-01 86.1% 27.0%
1ebdA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 49.0 4.10e-01 100.0% 88.4%
4epcA02 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.54 43.0 4.40e-01 94.4% 90.1%
2ix2B00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.54 46.0 3.27e-01 100.0% 76.3%
3zl8A02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.53 41.0 2.89e-01 81.9% 72.1%
3a1jB00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.53 47.0 3.22e-01 100.0% 77.0%
4m7xA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.53 42.0 3.90e-01 97.2% 68.1%
3picA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.53 47.0 2.99e-01 100.0% 38.7%
3p91A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.53 45.0 3.20e-01 100.0% 76.7%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 38.0 3.20e-01 77.8% 72.4%
4cy8A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 45.0 3.03e-01 93.1% 56.9%
5w7zA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.52 44.0 3.85e-01 95.8% 69.9%
3besR01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 43.0 4.16e-01 91.7% 96.4%
3buuB00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.52 42.0 3.07e-01 93.1% 67.7%
5bukB00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 43.0 2.66e-01 93.1% 90.1%
3i7fA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 46.0 3.78e-01 100.0% 62.5%
6l4qB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 45.0 3.69e-01 100.0% 56.3%
3gwrB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 43.0 3.67e-01 100.0% 81.9%
6nrzA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 45.0 3.50e-01 100.0% 52.9%
6ptrB01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.50 42.0 3.73e-01 97.2% 70.8%
5agvA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.50 42.0 3.64e-01 98.6% 90.3%
1ou8A00 2.30.30.220 Mainly Beta › Roll › SH3 type barrels. › SspB-like 0.50 45.0 3.96e-01 100.0% 71.7%
ECOD (68)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
None 0.80 69.0 4.23e-01 100.0% 17.4%
4985279 319.1.1.4 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 0.79 50.0 4.79e-01 76.4% 57.5%
4955327 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.75 47.0 5.29e-01 97.2% 83.6%
5054046 809.2.1.0 a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.74 47.0 5.12e-01 94.4% 78.3%
3164388 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.73 43.0 4.57e-01 84.7% 66.2%
4992039 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.73 39.0 3.90e-01 84.7% 50.0%
4957480 5.1.4.40 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 0.73 59.0 3.68e-01 100.0% 16.6%
3576662 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.73 57.0 3.76e-01 100.0% 20.7%
4967968 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.72 57.0 5.02e-01 90.3% 58.1%
5043125 809.2.1.0 a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.72 49.0 5.18e-01 97.2% 78.5%
3789432 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.71 61.0 3.74e-01 100.0% 16.8%
5019567 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.70 55.0 3.52e-01 100.0% 17.7%
3495619 220.1.1.22 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.70 46.0 3.97e-01 70.8% 44.5%
3448363 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.70 61.0 4.31e-01 100.0% 33.0%
3164102 252.2.1.0 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.70 35.0 4.35e-01 98.6% 77.8%
5026951 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.70 42.0 3.42e-01 76.4% 34.4%
4010974 5.1.5.165 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Rrn6_beta-prop 0.70 57.0 3.48e-01 100.0% 14.0%
4986017 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.69 49.0 4.99e-01 100.0% 77.1%
5013360 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.69 44.0 4.01e-01 100.0% 49.5%
3867672 2.1.1.22 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › HIN 0.68 42.0 4.32e-01 100.0% 64.7%
4944534 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.68 42.0 3.45e-01 91.7% 34.6%
3280978 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.68 40.0 4.14e-01 87.5% 61.4%
3387994 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.68 41.0 3.97e-01 90.3% 53.8%
5009392 5.1.3.127 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Tricorn_N 0.68 55.0 3.71e-01 100.0% 23.7%
3375459 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.68 52.0 3.62e-01 100.0% 24.5%
4002261 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.68 60.0 3.59e-01 100.0% 14.5%
3931122 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.67 44.0 4.03e-01 70.8% 51.6%
3385864 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.67 44.0 4.84e-01 100.0% 81.7%
1567587 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.67 40.0 4.04e-01 100.0% 60.6%
5020056 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.67 41.0 3.45e-01 91.7% 37.3%
4228328 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.67 53.0 5.10e-01 84.7% 95.0%
4955709 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.67 41.0 3.45e-01 90.3% 37.5%
3386077 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.66 41.0 4.90e-01 100.0% 100.0%
3387114 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.66 41.0 3.78e-01 86.1% 48.4%
157024 5.1.4.14 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.66 54.0 3.37e-01 100.0% 16.1%
3832602 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.66 48.0 4.10e-01 100.0% 50.0%
415 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.65 40.0 4.20e-01 76.4% 67.2%
3584551 5.1.1.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed 0.65 56.0 4.03e-01 100.0% 32.0%
160497 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.64 38.0 3.87e-01 98.6% 59.2%
5020098 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.63 40.0 4.14e-01 100.0% 67.1%
4275064 5.1.2.61 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › PF26549 0.63 47.0 4.17e-01 100.0% 53.6%
3392308 220.1.1.7 beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS 0.62 40.0 3.65e-01 70.8% 49.5%
3700863 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.61 42.0 3.81e-01 72.2% 79.8%
4024735 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.60 41.0 4.24e-01 88.9% 74.3%
4003998 3794.1.1.0 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit 0.60 47.0 3.89e-01 86.1% 70.0%
3271244 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 44.0 4.12e-01 81.9% 82.2%
3602244 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.57 43.0 3.40e-01 100.0% 39.6%
3736764 3711.1.1.0 alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein 0.57 50.0 3.77e-01 98.6% 83.3%
4941640 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.55 44.0 3.37e-01 86.1% 39.4%
3604394 218.4.1.1 a+b two layers › Enolase-N/ribosomal protein › Dhaf4260 N-terminal domain › Dhaf4260 N-terminal domain › DUF4213 0.55 48.0 4.35e-01 100.0% 72.0%
3281271 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.53 43.0 4.04e-01 100.0% 71.1%
5049254 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 43.0 3.47e-01 91.7% 60.0%
3504939 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.53 45.0 3.45e-01 93.1% 76.9%
4008673 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.53 45.0 3.11e-01 93.1% 52.3%
4960887 814.1.1.0 a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase 0.53 47.0 4.01e-01 100.0% 98.3%
4978224 2003.1.2.38 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Lycopene_cycl 0.52 46.0 2.82e-01 94.4% 50.4%
3614693 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.52 46.0 3.79e-01 100.0% 54.8%
4066165 264.2.1.0 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.52 41.0 3.80e-01 86.1% 68.4%
4625413 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.52 47.0 3.75e-01 100.0% 53.6%
4046583 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.51 42.0 3.47e-01 98.6% 50.0%
4974423 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.51 45.0 2.80e-01 95.8% 49.1%
4129337 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.51 45.0 3.47e-01 100.0% 44.2%
5000636 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.51 46.0 4.12e-01 100.0% 73.0%
5077962 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.51 39.0 3.35e-01 86.1% 92.8%
4993647 2003.1.3.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Pyr_redox_2 0.51 43.0 2.76e-01 93.1% 29.4%
3214362 243.1.1.75 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 0.50 40.0 3.62e-01 87.5% 79.0%
4983591 2005.1.1.10 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ETF 0.50 45.0 3.11e-01 98.6% 73.5%
4349584 2.1.1.127 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 0.50 42.0 3.51e-01 100.0% 53.6%