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IMGVR_UViG_3300045988_178991-3300045988-Ga0495776_136811_9675_10940

Arc-Vir

IMGVR_UViG_3300045988_178991-3300045988-Ga0495776_136811_9675_10940

Identity

Kingdom:
archaea

Quality

85.5 mean pLDDT

Cluster

View cluster (3 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 198-291
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3b8pA00 3.30.1890.10 Alpha Beta › 2-Layer Sandwich › Bacterial polysaccharide co-polymerase-like › FepE-like 0.65 45.0 3.49e-01 72.3% 97.6%
1q16B03 1.10.3650.10 Mainly Alpha › Orthogonal Bundle › nitrate reductase domain fold › nitrate reductase domain like 0.61 41.0 4.56e-01 74.5% 85.7%
3k6qA02 3.30.160.620 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.61 47.0 4.83e-01 81.9% 96.6%
4k7cA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.60 44.0 2.92e-01 77.7% 45.2%
3nkuA00 1.10.357.170 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › 0.59 42.0 3.48e-01 75.5% 88.6%
3en9A03 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 34.0 3.81e-01 93.6% 74.0%
3h78A02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.57 41.0 3.46e-01 74.5% 60.6%
1gcbA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.56 42.0 2.74e-01 77.7% 45.2%
4ubtD00 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.56 40.0 2.69e-01 75.5% 20.5%
7xinA03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.55 34.0 3.23e-01 78.7% 52.3%
2p1wA01 3.30.2430.10 Alpha Beta › 2-Layer Sandwich › Phosphothreonine lyase fold › phosphothreonine lyase 0.53 42.0 3.47e-01 88.3% 78.5%
1st0A02 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.50 39.0 3.12e-01 83.0% 68.6%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3488760 3937.1.1.0 ↗ alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 0.63 47.0 3.30e-01 79.8% 95.1%
3255034 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 42.0 3.80e-01 98.9% 49.6%
4027462 2004.1.1.211 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CLP1_P 0.58 49.0 3.61e-01 92.6% 55.9%
5078830 304.48.1.1 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.57 41.0 2.95e-01 73.4% 50.6%
5076430 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.55 25.0 2.98e-01 72.3% 60.0%
5048142 3281.1.1.1 ↗ alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M 0.55 50.0 2.98e-01 100.0% 46.2%
4067342 5069.1.1.15 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_C_asm 0.55 47.0 3.25e-01 96.8% 76.5%
3775678 2484.1.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.55 48.0 3.58e-01 100.0% 73.6%
3193113 5051.1.1.10 ↗ alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › AA_permease_2 0.55 41.0 2.60e-01 78.7% 68.9%
3521467 3016.1.1.21 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › PDXDC1-like_cen 0.53 37.0 3.80e-01 94.7% 74.4%
3983816 304.48.1.1 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.53 45.0 3.38e-01 96.8% 52.4%
3595739 1056.1.1.0 ↗ a+b two layers › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain 0.53 41.0 3.06e-01 92.6% 33.2%
3901459 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 45.0 2.72e-01 94.7% 26.3%
3220913 5001.1.1.0 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.52 35.0 2.46e-01 70.2% 76.9%
4139987 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 41.0 2.72e-01 85.1% 94.1%
3843693 3937.1.1.1 ↗ alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Connexin 0.51 41.0 3.28e-01 88.3% 90.5%
4004424 304.48.1.1 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.51 41.0 2.81e-01 88.3% 56.5%
4068028 304.48.1.1 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.51 41.0 2.99e-01 88.3% 51.7%
3759086 3016.1.1.21 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › PDXDC1-like_cen 0.51 37.0 3.23e-01 76.6% 54.5%
4461237 4967.1.1.0 ↗ alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases 0.51 43.0 2.77e-01 96.8% 24.7%
3409557 5001.1.1.5 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 0.50 41.0 3.11e-01 93.6% 72.7%
3800293 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.50 39.0 3.99e-01 94.7% 87.1%
3716727 2484.1.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.50 42.0 2.80e-01 93.6% 53.9%
D2 medium residues 1-55
PDB
Domain cluster: representative
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ylxA00 3.30.70.1480 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like 0.67 56.0 4.65e-01 94.5% 59.6%
3wjcA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.67 52.0 3.82e-01 87.3% 43.1%
4f7uF00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 51.0 4.62e-01 81.8% 68.5%
1d3bC00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 49.0 4.55e-01 80.0% 69.0%
4m78N00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 49.0 4.53e-01 80.0% 62.0%
1m5q101 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 49.0 4.62e-01 81.8% 66.2%
6asoH00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 50.0 4.39e-01 83.6% 55.4%
5d1pA01 3.10.450.740 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 58.0 5.44e-01 100.0% 88.1%
1d3bB00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 49.0 4.32e-01 81.8% 74.1%
3jb9F00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 49.0 4.28e-01 81.8% 59.8%
1ugiD00 3.10.450.20 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor 0.64 53.0 4.77e-01 100.0% 84.1%
1b34B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 49.0 4.45e-01 87.3% 63.5%
1ospO02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.62 44.0 3.31e-01 87.3% 28.8%
4c92B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 47.0 3.82e-01 81.8% 49.5%
4ns4A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.62 48.0 3.14e-01 89.1% 35.1%
4hgzA02 2.20.25.570 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.62 48.0 4.69e-01 87.3% 83.3%
8aimG01 3.10.450.20 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor 0.62 52.0 4.68e-01 100.0% 84.0%
2jiiA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 44.0 3.52e-01 83.6% 38.2%
8aa0E01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.60 50.0 3.21e-01 100.0% 33.7%
1v5mA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 46.0 3.60e-01 90.9% 83.8%
5eo6B00 3.40.1500.10 Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › Coproporphyrinogen III oxidase, aerobic 0.59 50.0 3.19e-01 100.0% 28.0%
1mo7A00 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.57 47.0 3.30e-01 100.0% 67.6%
3qc2B00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.57 46.0 2.93e-01 100.0% 17.9%
4h75A00 2.80.10.70 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty 0.57 47.0 3.29e-01 98.2% 81.4%
4uozA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.57 38.0 3.71e-01 70.9% 100.0%
3ecqA02 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.56 46.0 3.03e-01 96.4% 22.5%
3k1lA01 3.30.457.40 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › 0.56 42.0 3.74e-01 89.1% 60.9%
1sjgA00 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.55 43.0 3.48e-01 87.3% 73.2%
1v3eA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.55 45.0 2.74e-01 98.2% 16.2%
1v1qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 46.0 3.79e-01 100.0% 77.3%
3n54B01 6.20.190.10 Special › Other non-globular › Nuclear Transport Factor 2; Chain: A, › Nutrient germinant receptor protein C, domain 1 0.54 39.0 3.84e-01 80.0% 78.7%
2jrbA00 3.30.250.20 Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › L1 transposable element, C-terminal domain 0.53 33.0 3.16e-01 80.0% 50.8%
2fp8B00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.53 44.0 2.84e-01 100.0% 21.5%
2v8qA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.53 45.0 3.86e-01 98.2% 59.6%
3vz9B00 3.30.457.50 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Chromosome segregation protein Spc25 0.53 41.0 3.44e-01 89.1% 81.6%
4bg7A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.53 41.0 3.61e-01 100.0% 54.1%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.51 37.0 3.44e-01 89.1% 59.7%
1mhmA00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.50 41.0 2.75e-01 98.2% 66.4%
2gk6A02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.50 38.0 3.42e-01 87.3% 71.1%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4928052 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.66 53.0 3.26e-01 89.1% 14.1%
4987003 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.66 50.0 4.73e-01 81.8% 70.8%
4932541 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.66 49.0 4.52e-01 81.8% 65.8%
3177145 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.64 50.0 4.18e-01 87.3% 58.0%
3834272 5.1.5.96 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_3 0.63 54.0 3.44e-01 100.0% 22.0%
4013487 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 50.0 4.02e-01 87.3% 58.2%
3168781 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.63 50.0 4.05e-01 87.3% 56.2%
2798302 517.2.1.1 ↗ beta barrels › CBF-like › TraF › TraF › TrbI 0.63 49.0 3.99e-01 90.9% 56.4%
3585214 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 45.0 3.81e-01 81.8% 44.0%
4884259 2004.1.1.1190 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ERG4_ERG24, LSM, DUF1295 0.62 43.0 4.09e-01 72.7% 86.2%
5082785 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.61 51.0 4.65e-01 100.0% 72.5%
3600915 77.3.1.0 ↗ beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain 0.61 50.0 3.11e-01 98.2% 79.5%
4020096 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.61 53.0 3.96e-01 100.0% 64.3%
3229482 71.1.1.19 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › PF25898 0.61 47.0 3.36e-01 100.0% 25.4%
1769854 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.60 49.0 3.84e-01 92.7% 81.8%
4332050 7506.1.1.1 ↗ a/b three-layered sandwiches › N-terminal domain of GerK3 germinant receptor › N-terminal domain of GerK3 germinant receptor › N-terminal domain of GerK3 germinant receptor › GerA 0.60 45.0 3.72e-01 85.5% 83.6%
3925755 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.59 45.0 4.40e-01 92.7% 76.7%
3396594 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 45.0 4.41e-01 87.3% 78.3%
936 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 46.0 3.60e-01 90.9% 83.8%
4012738 708.1.2.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like 0.59 48.0 3.82e-01 100.0% 77.8%
3706670 292.2.1.6 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › DUF4520 0.58 42.0 3.48e-01 94.5% 40.0%
3458862 331.4.1.2 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF 0.58 48.0 3.71e-01 96.4% 40.0%
3303238 10.1.1.11 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 0.58 44.0 3.58e-01 89.1% 92.5%
4016159 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.57 41.0 2.55e-01 81.8% 11.7%
3731233 220.1.1.202 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_FT_N 0.57 47.0 3.57e-01 100.0% 68.0%
383967 216.1.1.7 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › FANCL_d1 0.56 42.0 3.76e-01 89.1% 62.2%
4929001 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 42.0 4.03e-01 81.8% 69.2%
4950373 873.1.1.0 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.56 40.0 3.01e-01 76.4% 50.7%
388243 206.1.1.10 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Choline_kinase 0.56 44.0 2.83e-01 98.2% 24.9%
3978756 3197.1.1.1 ↗ a+b two layers › N-terminal domain of effector protein PipB2 › N-terminal domain of effector protein PipB2 › N-terminal domain of effector protein PipB2 › PipB2_N 0.56 41.0 3.33e-01 83.6% 78.3%
3725498 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 42.0 3.95e-01 85.5% 70.0%
3604147 873.1.1.9 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R,DUF2507 0.55 41.0 3.17e-01 83.6% 61.4%
4345080 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.55 41.0 3.96e-01 89.1% 72.3%
4015835 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.55 39.0 3.05e-01 81.8% 36.6%
3665166 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.55 44.0 2.88e-01 100.0% 19.0%
4653170 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.55 46.0 3.93e-01 98.2% 85.3%
3266526 234.3.1.0 ↗ a+b two layers › Microbial ribonucleases-like › Colicin D nuclease domain › Colicin D nuclease domain 0.54 42.0 3.39e-01 98.2% 46.8%
2833528 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.54 43.0 2.61e-01 100.0% 23.1%
3945079 5.1.3.23 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL 0.54 42.0 2.82e-01 98.2% 25.5%
5037531 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.54 43.0 2.48e-01 98.2% 8.4%
3959845 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 42.0 2.70e-01 100.0% 19.7%
1098206 295.1.1.1 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 0.53 41.0 3.61e-01 100.0% 54.1%
5053445 225.1.1.0 ↗ a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.52 38.0 2.72e-01 76.4% 71.9%
3410562 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.52 42.0 4.00e-01 100.0% 91.4%
3719128 310.3.1.16 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › PF30974 0.51 40.0 3.24e-01 85.5% 59.0%
3464113 5.1.10.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.51 41.0 3.52e-01 98.2% 82.0%
4568953 136.1.1.1 ↗ alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase 0.51 38.0 2.36e-01 87.3% 13.8%
4978676 295.1.1.1 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 0.50 40.0 3.71e-01 100.0% 67.5%
D3 medium residues 77-196
PDB
Domain cluster: rep: MT157285.1__QIW86072.1__PKP2_20__00020__D36-168
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2vugA03 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.81 66.0 7.10e-01 98.3% 100.0%
1s68A02 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.79 71.0 7.33e-01 99.2% 100.0%
6jptA00 3.30.230.90 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.56 38.0 3.80e-01 95.8% 67.8%
1gpcA00 3.90.198.10 Alpha Beta › Alpha-Beta Complex › Replication Fork Single-Stranded DNA Binding Protein › Replication Fork Single-Stranded Dna Binding Protein 0.56 40.0 3.31e-01 75.0% 73.4%
5u3fB01 3.30.470.10 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain 0.53 37.0 3.59e-01 73.3% 71.4%
6ryvA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 26.0 3.44e-01 81.7% 90.8%
5nj5A01 3.30.2290.10 Alpha Beta › 2-Layer Sandwich › PmbA/TldD fold › PmbA/TldD superfamily 0.50 43.0 3.52e-01 95.8% 76.7%
1m0wA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.50 35.0 3.73e-01 96.7% 81.5%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3271939 206.1.3.24 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RNA_lig_T4_1 0.80 70.0 5.09e-01 100.0% 37.6%
193072 206.1.3.23 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RNA_ligase 0.80 72.0 5.60e-01 100.0% 48.5%
4881570 206.1.3.24 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RNA_lig_T4_1 0.78 66.0 5.04e-01 100.0% 41.9%
3487043 206.1.3.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp 0.62 45.0 3.48e-01 74.2% 48.6%
3296651 3662.1.1.1 ↗ a+b two layers › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › PAC3 0.61 40.0 4.10e-01 99.2% 69.6%
3255162 3662.1.1.1 ↗ a+b two layers › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › PAC3 0.60 38.0 3.95e-01 98.3% 67.8%
378 2.1.1.45 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › gp32 0.58 41.0 3.42e-01 73.3% 74.8%
3494106 206.1.3.16 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Ins134_P3_kin 0.57 42.0 3.50e-01 75.0% 58.5%
5039415 4020.1.1.1 ↗ a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › Aminotran_4 0.52 39.0 4.11e-01 83.3% 88.2%
D4 medium residues 302-366
PDB
Domain cluster: representative
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ye6A02 1.10.10.2420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.75 61.0 6.37e-01 100.0% 98.3%
1n81A00 1.10.3030.10 Mainly Alpha › Orthogonal Bundle › Gametocyte protein Pfg27 › Gametocyte protein Pfg27 0.72 63.0 4.55e-01 100.0% 37.6%
3tl4X02 1.10.10.2420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.70 57.0 5.62e-01 100.0% 84.7%
2khmA01 1.10.10.1350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain 0.68 59.0 5.08e-01 100.0% 63.0%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 38.0 4.50e-01 100.0% 95.1%
2m7bA00 1.10.10.1920 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.63 55.0 5.26e-01 100.0% 88.3%
1ltmA02 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.57 48.0 3.64e-01 100.0% 91.9%
5lnkJ01 1.20.120.1200 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ 0.56 40.0 3.05e-01 78.5% 32.5%
3zqcA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.56 39.0 3.92e-01 100.0% 76.6%
1jm6B02 1.20.140.20 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Alpha-ketoacid/pyruvate dehydrogenase kinase, N-terminal domain 0.55 42.0 3.29e-01 86.2% 84.7%
2kjgA00 1.20.120.970 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.55 45.0 4.07e-01 98.5% 67.7%
8sfuA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.54 41.0 3.06e-01 80.0% 58.7%
1ldjA01 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.54 45.0 3.78e-01 100.0% 60.0%
3mekA03 1.10.220.160 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › 0.53 42.0 3.86e-01 87.7% 98.8%
2wyoA03 1.10.1080.10 Mainly Alpha › Orthogonal Bundle › Glutathione Synthetase; Chain A, domain 3 › Glutathione Synthetase; Chain A, domain 3 0.51 35.0 3.48e-01 76.9% 78.7%
2xioA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.51 37.0 2.42e-01 78.5% 45.1%
1tjcA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.50 36.0 3.22e-01 78.5% 52.6%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4145773 101.35.1.4 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 0.73 49.0 5.29e-01 87.7% 81.8%
3803646 327.11.2.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.67 43.0 4.39e-01 70.8% 66.2%
4936739 3921.1.1.1 ↗ alpha complex topology › Na(+)-translocating NADH-quinone reductase subunit D › Na(+)-translocating NADH-quinone reductase subunit D › Na(+)-translocating NADH-quinone reductase subunit D › Rnf-Nqr 0.61 53.0 3.80e-01 100.0% 66.0%
3597126 509.1.1.0 ↗ alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain 0.58 48.0 4.33e-01 98.5% 76.0%
3969497 3222.1.1.0 ↗ a+b complex topology › Regulatory domain of isocitrate dehydrogenase kinase/phosphatase › Regulatory domain of isocitrate dehydrogenase kinase/phosphatase › Regulatory domain of isocitrate dehydrogenase kinase/phosphatase 0.58 47.0 3.04e-01 95.4% 19.3%
2701013 109.4.1.17 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cullin 0.56 46.0 4.48e-01 100.0% 93.3%
3989304 633.16.1.9 ↗ alpha bundles › Bromodomain-like › PMT helical bundle domain-like › PMT helical bundle domain-like › DDE_Tnp_IS66 0.54 43.0 3.80e-01 96.9% 99.1%
3584182 604.9.1.18 ↗ alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Zip 0.53 44.0 4.12e-01 96.9% 91.8%
3901327 604.6.1.0 ↗ alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.51 42.0 3.49e-01 92.3% 57.4%
4979974 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.51 36.0 3.88e-01 78.5% 89.1%
3485538 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.50 39.0 2.79e-01 92.3% 26.5%
D5 medium residues 372-419
PDB
Domain cluster: representative
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3tl4X02 1.10.10.2420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.79 68.0 6.04e-01 100.0% 76.4%
1vtnC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 66.0 5.17e-01 97.9% 52.0%
1k78I00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 66.0 6.29e-01 100.0% 82.8%
3e3vA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 61.0 5.89e-01 97.9% 89.3%
1p6rA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 63.0 5.34e-01 100.0% 74.4%
4eqqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 58.0 5.81e-01 97.9% 91.7%
4ragA02 1.10.10.430 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Phosphatase 2C, C-terminal domain suprefamily 0.73 60.0 5.52e-01 100.0% 76.5%
2gxaE01 1.10.10.510 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Zinc finger, large T-antigen D1 domain 0.70 57.0 5.13e-01 100.0% 76.7%
2doeA00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.70 59.0 5.03e-01 100.0% 57.8%
7p2yd01 1.10.520.20 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase 0.69 60.0 4.79e-01 100.0% 75.8%
3l9tA01 1.10.1240.70 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › 0.69 57.0 4.79e-01 100.0% 54.2%
3efoB01 1.20.120.730 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Sec23/Sec24 helical domain 0.68 57.0 4.11e-01 100.0% 66.9%
2da3A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.65 51.0 5.19e-01 100.0% 93.6%
2qgyB01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.65 53.0 4.02e-01 100.0% 37.2%
2c5uA02 1.10.3550.20 Mainly Alpha › Orthogonal Bundle › eoxyguanosinetriphosphate triphosphohydrolase fold › 0.64 50.0 3.89e-01 97.9% 38.2%
2xheA03 3.90.830.10 Alpha Beta › Alpha-Beta Complex › Syntaxin Binding Protein 1; Chain A, domain 2 › Sec1/Munc18 (SM) protein, domain 3a 0.64 50.0 3.70e-01 83.3% 38.0%
2lrdA00 1.10.10.1840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.64 46.0 4.41e-01 93.8% 65.6%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 53.0 5.18e-01 100.0% 90.7%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 50.0 5.05e-01 100.0% 94.0%
2ld7B00 1.20.1160.11 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix 0.62 49.0 4.40e-01 93.8% 80.0%
3kluA01 3.30.2220.30 Alpha Beta › 2-Layer Sandwich › rbstp2171 › 0.62 48.0 3.75e-01 87.5% 70.9%
7lhsB01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.62 53.0 3.57e-01 97.9% 81.9%
3a7rA02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.62 50.0 4.28e-01 97.9% 61.8%
2b4lA02 3.10.105.10 Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 0.61 52.0 3.65e-01 97.9% 39.5%
2khvA01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.61 48.0 4.24e-01 100.0% 62.4%
2e7xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 49.0 4.87e-01 100.0% 92.3%
1x4qA01 1.20.1390.10 Mainly Alpha › Up-down Bundle › PWI domain › PWI domain 0.60 49.0 4.46e-01 100.0% 71.8%
1ywqA00 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.60 48.0 3.25e-01 93.8% 45.2%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 47.0 4.72e-01 95.8% 94.0%
3u5ei01 1.10.10.1760 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L36 0.59 47.0 4.42e-01 100.0% 76.1%
7a0hA01 3.30.1140.60 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › F-actin capping protein, alpha subunit 0.59 46.0 3.88e-01 100.0% 47.5%
7crnA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.59 49.0 3.16e-01 100.0% 69.6%
4a25B01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.58 41.0 2.89e-01 77.1% 73.9%
5jxxA02 1.20.1180.10 Mainly Alpha › Up-down Bundle › Udp N-acetylglucosamine O-acyltransferase; Domain 2 › Udp N-acetylglucosamine O-acyltransferase, C-terminal domain 0.57 46.0 4.28e-01 100.0% 97.0%
2cdqA02 1.20.120.1320 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartokinase, catalytic domain 0.57 44.0 3.74e-01 97.9% 63.9%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 46.0 4.06e-01 100.0% 61.8%
2go7A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.56 43.0 4.05e-01 95.8% 79.1%
2ii2A04 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.55 46.0 4.01e-01 100.0% 60.8%
3bvoA02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.55 38.0 3.19e-01 75.0% 41.9%
2bvlA01 1.20.58.1190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 46.0 3.91e-01 97.9% 96.5%
1rq5A02 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.53 44.0 2.57e-01 100.0% 45.4%
2wapA00 3.90.1300.10 Alpha Beta › Alpha-Beta Complex › Amidase signature (AS) enzymes › Amidase signature (AS) domain 0.52 44.0 2.55e-01 100.0% 58.0%
2zm5A02 1.10.20.140 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › 0.52 43.0 3.88e-01 97.9% 70.8%
3zeuB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.51 41.0 2.95e-01 97.9% 52.3%
ECOD (57)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4508795 7000.1.1.0 ↗ alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS 0.90 81.0 6.76e-01 100.0% 66.3%
4305129 7000.1.1.0 ↗ alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS 0.90 80.0 6.88e-01 100.0% 70.7%
5048198 7000.1.1.0 ↗ alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS 0.89 80.0 6.85e-01 100.0% 70.7%
5055491 610.3.1.1 ↗ alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.89 73.0 4.97e-01 91.7% 26.9%
3604252 7000.1.1.0 ↗ alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS 0.87 76.0 7.32e-01 100.0% 85.5%
4381449 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.87 77.0 6.80e-01 100.0% 75.7%
4284771 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.86 75.0 6.51e-01 100.0% 70.7%
5010390 101.1.17.0 ↗ alpha arrays › HTH › HTH › FF domain 0.85 74.0 6.16e-01 100.0% 62.4%
4672609 198.1.1.0 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.85 75.0 6.44e-01 100.0% 70.7%
4678981 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.85 74.0 7.32e-01 97.9% 92.0%
3240699 101.1.1.75 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 0.84 75.0 6.56e-01 100.0% 68.6%
3718460 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.83 72.0 5.69e-01 100.0% 50.0%
4437630 3705.1.1.0 ↗ alpha arrays › Bacterial chaperone lipoprotein (PulS_OutS) › Bacterial chaperone lipoprotein (PulS_OutS) › Bacterial chaperone lipoprotein (PulS_OutS) 0.83 71.0 6.37e-01 100.0% 75.7%
4932388 101.1.6.0 ↗ alpha arrays › HTH › HTH › TrpR 0.83 71.0 6.19e-01 100.0% 69.3%
5040456 101.7.1.0 ↗ alpha arrays › HTH › DEK-C › DEK-C 0.82 71.0 6.17e-01 100.0% 70.7%
5035650 101.1.17.0 ↗ alpha arrays › HTH › HTH › FF domain 0.82 69.0 6.13e-01 95.8% 72.9%
5008229 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.82 68.0 5.96e-01 95.8% 66.7%
4480957 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.81 62.0 5.47e-01 83.3% 67.1%
5031505 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.81 71.0 5.80e-01 100.0% 62.2%
3924079 198.1.1.0 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.81 69.0 5.82e-01 100.0% 65.9%
3576763 101.1.1.332 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Nucleolin_bd 0.80 70.0 6.34e-01 97.9% 80.0%
4107520 198.1.1.0 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.80 68.0 5.98e-01 100.0% 70.7%
4252854 198.1.1.0 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.80 69.0 6.01e-01 100.0% 73.3%
5053497 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.80 68.0 6.38e-01 97.9% 90.0%
5068621 101.7.1.0 ↗ alpha arrays › HTH › DEK-C › DEK-C 0.79 69.0 6.00e-01 100.0% 69.3%
4325038 198.1.1.0 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.79 67.0 5.65e-01 100.0% 62.4%
4932241 2007.1.2.56 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › DUF116 0.79 68.0 4.61e-01 100.0% 26.7%
5066348 7000.1.1.0 ↗ alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS 0.79 67.0 5.78e-01 100.0% 66.3%
5044345 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.77 69.0 5.77e-01 100.0% 68.8%
3513576 101.1.1.76 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 0.77 65.0 6.33e-01 100.0% 89.1%
3706397 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.77 67.0 6.07e-01 100.0% 92.3%
5078179 173.1.1.0 ↗ alpha arrays › Uteroglobin-like › Uteroglobin-like › Uteroglobin-like 0.76 63.0 5.56e-01 97.9% 69.3%
4957413 101.1.2.244 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_21 0.76 66.0 6.56e-01 100.0% 96.0%
3933926 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.76 67.0 6.10e-01 100.0% 75.4%
5070167 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.76 67.0 6.46e-01 100.0% 89.1%
4983598 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.75 65.0 5.91e-01 97.9% 84.6%
2330433 101.1.2.25 ↗ alpha arrays › HTH › HTH › winged helix domain › FUR 0.74 63.0 4.52e-01 100.0% 40.4%
3789626 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.74 64.0 5.84e-01 100.0% 73.8%
3233004 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.74 60.0 6.02e-01 100.0% 92.0%
4126690 101.35.1.4 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 0.73 57.0 5.57e-01 91.7% 87.3%
3258173 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.73 61.0 5.92e-01 95.8% 87.3%
4946290 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.73 62.0 5.74e-01 100.0% 76.9%
4977346 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.73 56.0 5.60e-01 100.0% 84.0%
4996283 101.43.1.4 ↗ alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain › HTH_AsnC-type 0.73 62.0 5.67e-01 100.0% 75.4%
5014572 2.21.1.3 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › HTH_OrfB_IS605 0.72 59.0 4.20e-01 100.0% 33.9%
3477799 198.1.1.0 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.72 59.0 5.22e-01 100.0% 73.1%
3954237 532.2.1.16 ↗ alpha arrays › Type III secretion system domain-like › Type III secretion system domains › Type III secretion system domains › DUF732 0.71 60.0 5.17e-01 100.0% 83.7%
3579249 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.71 58.0 4.99e-01 100.0% 72.9%
3315399 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.68 54.0 5.37e-01 100.0% 90.0%
4963816 101.1.17.0 ↗ alpha arrays › HTH › HTH › FF domain 0.67 56.0 4.49e-01 100.0% 100.0%
4995680 101.35.1.0 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.67 56.0 5.30e-01 100.0% 90.0%
3833695 101.1.1.3 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.65 53.0 4.36e-01 97.9% 49.5%
5000777 601.7.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.62 50.0 4.13e-01 93.8% 55.3%
4958329 601.7.1.34 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › DUF4129 0.61 51.0 4.02e-01 95.8% 67.6%
3236092 101.11.1.0 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.59 47.0 4.22e-01 100.0% 75.0%
3963650 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.58 49.0 4.87e-01 97.9% 94.0%
3976663 3812.1.1.1 ↗ alpha bundles › Type III secretion protein YscE › Type III secretion protein YscE › Type III secretion protein YscE › T3SS_needle_E 0.51 42.0 3.89e-01 97.9% 100.0%