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IMGVR_UViG_3300045988_179712-3300045988-Ga0495776_097035_4_1263
Arc-VirIMGVR_UViG_3300045988_179712-3300045988-Ga0495776_097035_4_1263
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-68
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3l48A01 | 2.60.40.2070 | Mainly Beta › Sandwich › Immunoglobulin-like › PapC, C-terminal domain | 0.73 | 56.0 | 5.09e-01 | 98.2% | 63.2% |
| 2a74A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.70 | 60.0 | 5.03e-01 | 100.0% | 57.8% |
| 5yxkA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 57.0 | 4.69e-01 | 100.0% | 72.7% |
| 4fl4F02 | 2.60.40.4130 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.67 | 53.0 | 3.99e-01 | 100.0% | 33.8% |
| 1hxmB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 54.0 | 4.36e-01 | 100.0% | 73.6% |
| 4wrnA02 | 2.60.40.3210 | Mainly Beta › Sandwich › Immunoglobulin-like › Zona pellucida, ZP-N domain | 0.65 | 55.0 | 4.61e-01 | 100.0% | 68.6% |
| 2pn5A02 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.63 | 53.0 | 4.54e-01 | 100.0% | 60.4% |
| 2wanA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 53.0 | 4.48e-01 | 100.0% | 68.0% |
| 2druA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 52.0 | 4.40e-01 | 98.2% | 69.9% |
| 2x5pA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 52.0 | 4.33e-01 | 100.0% | 52.9% |
| 4cvuA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 51.0 | 4.20e-01 | 100.0% | 75.0% |
| 2jksA02 | 2.60.40.1320 | Mainly Beta › Sandwich › Immunoglobulin-like › SRS domain | 0.60 | 51.0 | 3.97e-01 | 100.0% | 64.7% |
| 7u7nA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 51.0 | 4.39e-01 | 100.0% | 69.1% |
| 6fhvA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 49.0 | 4.30e-01 | 100.0% | 74.5% |
| 6u7iB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 49.0 | 4.31e-01 | 96.5% | 63.0% |
| 2z0bE00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 49.0 | 4.15e-01 | 100.0% | 73.6% |
| 7k7jA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 49.0 | 4.07e-01 | 96.5% | 75.0% |
| 6u7jA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 49.0 | 4.29e-01 | 96.5% | 62.9% |
| 4go6B01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 45.0 | 4.53e-01 | 89.5% | 98.3% |
| 4jgwA01 | 1.20.870.10 | Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 | 0.58 | 42.0 | 3.04e-01 | 100.0% | 28.2% |
| 2w91A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 47.0 | 4.04e-01 | 100.0% | 62.1% |
| 4ak1A01 | 2.60.40.2710 | Mainly Beta › Sandwich › Immunoglobulin-like › BT4661 domain 1 | 0.56 | 45.0 | 4.01e-01 | 98.2% | 67.4% |
| 2k0rA00 | 2.60.40.1250 | Mainly Beta › Sandwich › Immunoglobulin-like › Thiol:disulfide interchange protein DsbD, N-terminal domain | 0.56 | 45.0 | 3.67e-01 | 98.2% | 64.1% |
| 3rlsB00 | 2.60.40.1970 | Mainly Beta › Sandwich › Immunoglobulin-like › YEATS domain | 0.56 | 46.0 | 3.57e-01 | 100.0% | 40.3% |
| 3g3tA00 | 3.20.100.30 | Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › VTC, catalytic tunnel domain | 0.55 | 38.0 | 2.49e-01 | 100.0% | 15.7% |
| 3ci0I00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.54 | 37.0 | 3.31e-01 | 71.9% | 91.6% |
| 8gr2A01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.54 | 41.0 | 3.00e-01 | 91.2% | 71.3% |
| 4hkhA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.53 | 41.0 | 3.26e-01 | 96.5% | 71.8% |
| 1t2pA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.52 | 43.0 | 3.39e-01 | 100.0% | 75.9% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4979453 | 11.1.1.237 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG4 | 0.73 | 63.0 | 5.46e-01 | 100.0% | 72.2% |
| 5047972 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.72 | 62.0 | 5.30e-01 | 100.0% | 68.4% |
| 4179795 | 11.1.4.25 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › PapC_C | 0.71 | 58.0 | 5.05e-01 | 98.2% | 60.0% |
| 3652210 | 11.1.4.70 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › NOMO1-like_1st | 0.70 | 61.0 | 5.06e-01 | 100.0% | 60.0% |
| 3172844 | 11.1.1.75 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › He_PIG | 0.69 | 59.0 | 4.72e-01 | 100.0% | 55.8% |
| 5044834 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 55.0 | 4.82e-01 | 96.5% | 64.2% |
| 5073932 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 55.0 | 4.85e-01 | 100.0% | 61.1% |
| 4256432 | 11.1.4.72 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › NOMO1-like_2nd | 0.66 | 55.0 | 5.00e-01 | 100.0% | 68.8% |
| 3191741 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 53.0 | 4.66e-01 | 100.0% | 62.1% |
| 3928310 | 11.1.1.588 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Fibulin_C | 0.63 | 52.0 | 4.57e-01 | 100.0% | 67.4% |
| 4392638 | 11.1.1.75 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › He_PIG | 0.63 | 50.0 | 4.49e-01 | 100.0% | 61.2% |
| 3271339 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 52.0 | 4.99e-01 | 100.0% | 98.6% |
| 3527855 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 50.0 | 4.51e-01 | 100.0% | 62.4% |
| 3585020 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 51.0 | 5.07e-01 | 100.0% | 93.3% |
| 3578875 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.62 | 52.0 | 3.93e-01 | 100.0% | 36.8% |
| 3992014 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 49.0 | 4.18e-01 | 100.0% | 52.0% |
| 3253618 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 52.0 | 4.73e-01 | 100.0% | 75.0% |
| 3476148 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 51.0 | 4.21e-01 | 100.0% | 51.3% |
| 3472375 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 52.0 | 4.59e-01 | 100.0% | 80.0% |
| 3490437 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 52.0 | 4.36e-01 | 100.0% | 61.0% |
| 3993255 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 51.0 | 4.93e-01 | 100.0% | 98.5% |
| 3490262 | 11.1.4.72 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › NOMO1-like_2nd | 0.60 | 52.0 | 4.52e-01 | 100.0% | 67.8% |
| 5023943 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 50.0 | 4.16e-01 | 100.0% | 75.5% |
| 3716955 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 50.0 | 4.74e-01 | 98.2% | 78.6% |
| 3880994 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 48.0 | 4.26e-01 | 100.0% | 64.2% |
| 3487748 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 49.0 | 4.59e-01 | 100.0% | 98.7% |
| 4395737 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 49.0 | 4.41e-01 | 100.0% | 67.1% |
| 5060238 | 11.1.1.533 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › HYR | 0.58 | 48.0 | 4.31e-01 | 100.0% | 64.4% |
| 3537429 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 46.0 | 4.09e-01 | 98.2% | 66.3% |
| 3709246 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.57 | 48.0 | 4.70e-01 | 100.0% | 96.9% |
| 3996257 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 44.0 | 4.20e-01 | 100.0% | 72.0% |
| 3484988 | 11.1.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin | 0.55 | 45.0 | 3.64e-01 | 100.0% | 66.2% |
| 3262826 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.54 | 44.0 | 3.92e-01 | 100.0% | 66.3% |
| 3872696 | 922.1.1.0 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat | 0.54 | 39.0 | 4.24e-01 | 100.0% | 95.6% |
| 3949689 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 44.0 | 3.92e-01 | 96.5% | 67.8% |
| 3596920 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.54 | 45.0 | 3.78e-01 | 100.0% | 54.5% |
| 4940396 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 42.0 | 3.46e-01 | 100.0% | 70.5% |
| 4889770 | 11.1.4.135 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CBM_48 | 0.52 | 36.0 | 3.12e-01 | 78.9% | 43.8% |
D2
high
residues 73-160
Domain cluster:
rep: IMGVR_UViG_3300018013_000490-3300018013-Ga0187873_100144020__D355-451
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF16640.12 best | Big_3_5 | 37.6 | 3.70e-09 | 95.5% | 96.6% |
D3
high
residues 168-253
Domain cluster:
rep: IMGVR_UViG_3300018013_000490-3300018013-Ga0187873_100144020__D355-451
D4
high
residues 263-418
Domain cluster:
rep: IMGVR_UViG_2799112916_000001-2799112916-2800886965__D17-127