Back to structures

IMGVR_UViG_3300045988_181005-3300045988-Ga0495776_057378_41141_41932

Arc-Vir

IMGVR_UViG_3300045988_181005-3300045988-Ga0495776_057378_41141_41932

Quality

57.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-110
PDB
D2 high residues 168-261
PDB
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4iluA02 1.20.58.1290 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › CarD-like, C-terminal domain 0.69 44.0 4.18e-01 86.2% 55.0%
4od8D00 6.10.140.1880 Special › Helix non-globular › Helix Hairpins › 0.67 34.0 4.33e-01 97.9% 88.2%
4zy7A00 3.30.1050.40 Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › 0.63 49.0 4.54e-01 84.0% 100.0%
5h5mA02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.62 48.0 4.29e-01 81.9% 93.1%
1n00A01 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.61 36.0 3.80e-01 98.9% 64.3%
1anxA04 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.61 36.0 3.98e-01 98.9% 75.0%
4w8pA02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.61 47.0 4.24e-01 83.0% 93.8%
2lt3A01 1.20.58.1290 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › CarD-like, C-terminal domain 0.60 37.0 3.66e-01 85.1% 58.0%
4zahA02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.60 46.0 4.21e-01 84.0% 87.4%
3wctD00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.59 46.0 3.96e-01 81.9% 88.4%
3kyiA00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.59 51.0 4.61e-01 94.7% 89.8%
7q37A01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.58 51.0 4.00e-01 100.0% 75.7%
2p7vA00 1.20.120.1370 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Regulator of RNA polymerase sigma(70) subunit, domain 4 0.58 44.0 3.83e-01 81.9% 72.2%
3dr4A02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.58 44.0 4.10e-01 84.0% 84.0%
4hkaA01 1.20.58.480 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 50.0 3.45e-01 92.6% 79.9%
2bnlC00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.57 43.0 3.87e-01 81.9% 94.0%
3ucaA00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.56 44.0 3.21e-01 85.1% 70.1%
1chuA03 1.20.58.100 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain 0.56 39.0 4.04e-01 98.9% 76.1%
5dkoA02 1.10.3900.10 Mainly Alpha › Orthogonal Bundle › YacF-like › YacF-like 0.56 43.0 3.62e-01 84.0% 96.4%
4qgrA02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.55 42.0 3.94e-01 83.0% 83.6%
3pfeA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.55 48.0 3.45e-01 100.0% 83.3%
2ogaA02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.55 43.0 3.95e-01 85.1% 82.4%
4bwiB02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.55 48.0 3.91e-01 97.9% 99.5%
4a9aA01 6.10.140.1070 Special › Helix non-globular › Helix Hairpins › 0.55 38.0 3.65e-01 72.3% 98.2%
5dlqB01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.54 47.0 3.03e-01 94.7% 29.1%
2pvqA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.54 41.0 3.96e-01 80.9% 83.0%
5ib9A01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.54 47.0 3.43e-01 100.0% 56.1%
5z7qA00 1.20.1330.10 Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain 0.54 41.0 3.42e-01 84.0% 70.5%
3iibA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.53 47.0 3.38e-01 100.0% 54.5%
1kf6A03 1.20.58.100 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain 0.53 39.0 3.64e-01 98.9% 60.8%
3hgtA00 3.40.50.12360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 47.0 3.38e-01 100.0% 73.1%
4f0qA02 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.53 46.0 3.69e-01 97.9% 60.4%
1f2eA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.53 40.0 3.85e-01 80.9% 84.9%
4g80T00 1.20.120.350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C 0.52 43.0 3.78e-01 89.4% 92.8%
2diwA01 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.52 44.0 3.92e-01 94.7% 86.5%
3g7rA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.52 42.0 3.30e-01 85.1% 85.7%
4dmzB01 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.52 46.0 4.04e-01 100.0% 95.8%
8carA01 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.52 45.0 3.09e-01 100.0% 52.6%
1ldjA01 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.52 46.0 4.14e-01 94.7% 89.6%
4exjA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.52 39.0 3.67e-01 81.9% 79.3%
4gf0A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.52 38.0 3.65e-01 78.7% 86.7%
3zq5A03 3.30.450.270 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain 0.52 44.0 3.86e-01 100.0% 88.9%
2rkkA01 1.25.40.270 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Vacuolar protein sorting-associated protein vta1 0.51 38.0 3.31e-01 80.9% 91.7%
1zoyA03 1.20.58.100 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain 0.51 38.0 3.57e-01 98.9% 62.4%
8amzP01 1.25.40.570 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.51 42.0 2.87e-01 92.6% 26.9%
4ikhA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.51 40.0 3.61e-01 97.9% 62.2%
2ycdA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.51 39.0 3.63e-01 94.7% 65.8%
2imiB02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.51 45.0 3.99e-01 100.0% 79.3%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4022933 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 44.0 4.72e-01 85.1% 71.1%
3605559 604.9.1.0 alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 0.69 43.0 4.10e-01 98.9% 54.1%
3996406 604.6.1.0 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.67 40.0 4.52e-01 98.9% 80.0%
3525986 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.64 44.0 4.19e-01 97.9% 60.9%
3925622 603.1.1.97 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin, SNARE 0.64 46.0 3.41e-01 75.5% 80.4%
3934273 3948.1.1.0 alpha bundles › V(D)J recombination-activating protein 1 helical bundle domain › V(D)J recombination-activating protein 1 helical bundle domain › V(D)J recombination-activating protein 1 helical bundle domain 0.62 43.0 3.38e-01 100.0% 35.3%
3415238 603.1.1.6 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin_2 0.62 46.0 3.66e-01 77.7% 82.7%
3982462 4132.1.1.1 alpha bundles › IpaD-like › IpaD-like › IpaD-like › T3SS_TC 0.61 48.0 3.35e-01 84.0% 92.7%
3681479 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.61 43.0 3.96e-01 98.9% 57.5%
4995268 601.3.1.1 alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › Hpt 0.60 53.0 4.69e-01 94.7% 84.6%
3929562 864.1.1.1 a+b two layers › DLC › DLC › DLC › Dynein_light 0.60 35.0 3.70e-01 93.6% 64.3%
3473984 603.1.1.97 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin, SNARE 0.60 42.0 3.12e-01 74.5% 69.8%
4309485 4229.1.1.2 alpha bundles › Indolic compounds 2,3-dioxygenase-like › Indolic compounds 2,3-dioxygenase-like › Indolic compounds 2,3-dioxygenase-like › Trp_dioxygenase 0.59 52.0 3.43e-01 92.6% 83.4%
3223927 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 42.0 2.84e-01 74.5% 29.0%
3927056 603.1.1.1 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin 0.58 42.0 3.23e-01 74.5% 84.3%
5065764 601.4.1.0 alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains 0.58 45.0 4.43e-01 84.0% 93.3%
3462735 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.58 50.0 4.13e-01 94.7% 57.6%
4944703 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.58 45.0 4.06e-01 84.0% 90.8%
4258985 4229.1.1.2 alpha bundles › Indolic compounds 2,3-dioxygenase-like › Indolic compounds 2,3-dioxygenase-like › Indolic compounds 2,3-dioxygenase-like › Trp_dioxygenase 0.58 50.0 3.31e-01 92.6% 78.6%
3345552 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 50.0 4.02e-01 93.6% 66.9%
3187296 603.1.1.98 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SNARE, Syntaxin_2 0.57 43.0 3.30e-01 78.7% 88.8%
3274091 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 49.0 3.57e-01 93.6% 53.2%
4950579 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.56 50.0 4.81e-01 100.0% 90.9%
3464383 3121.1.1.9 a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA2_Toc75 0.56 51.0 4.90e-01 97.9% 95.2%
157755 601.7.1.7 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › NTase_sub_bind 0.56 43.0 4.05e-01 84.0% 94.1%
3236850 601.55.1.0 alpha bundles › Four-helical up-and-down bundle › anti-complement domain of BBK32 › anti-complement domain of BBK32 0.56 44.0 4.25e-01 84.0% 82.9%
3504673 109.4.1.469 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › INTS15 0.56 48.0 3.21e-01 93.6% 38.3%
4017645 603.1.1.6 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin_2 0.56 41.0 3.35e-01 78.7% 88.1%
3204361 316.1.1.63 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF7582 0.55 44.0 3.45e-01 96.8% 40.7%
5073131 3684.1.1.0 alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like 0.55 43.0 3.98e-01 84.0% 91.7%
3526587 109.4.1.839 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Maestro_HEAT 0.55 47.0 3.21e-01 94.7% 44.9%
3876359 4207.1.2.105 alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region › PF26705 0.55 37.0 3.47e-01 70.2% 57.4%
4985869 283.2.1.0 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like 0.54 40.0 4.18e-01 89.4% 83.1%
3643878 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 47.0 3.33e-01 94.7% 46.0%
3220259 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.54 47.0 3.32e-01 100.0% 70.5%
3705492 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 46.0 3.45e-01 94.7% 57.1%
3172094 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.54 40.0 3.48e-01 78.7% 87.3%
3945413 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.54 46.0 3.82e-01 94.7% 95.9%
3296716 109.4.1.1264 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_16 0.54 45.0 3.28e-01 91.5% 37.0%
5067411 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 46.0 4.23e-01 94.7% 78.4%
3829193 109.4.1.1170 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_27 0.54 47.0 3.69e-01 97.9% 62.4%
3195085 109.4.1.1399 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Tuberin, DUF3384 0.53 45.0 2.81e-01 93.6% 22.8%
3466658 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 44.0 3.07e-01 91.5% 29.7%
4001455 109.4.1.1407 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › STAG, SCD, HEAT_SCC3-SA 0.53 46.0 2.74e-01 94.7% 18.7%
4554674 138.1.1.0 alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain 0.53 42.0 4.01e-01 100.0% 71.7%
3509607 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 46.0 3.57e-01 92.6% 95.3%
3616727 603.1.1.98 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SNARE, Syntaxin_2 0.52 48.0 3.67e-01 100.0% 89.5%
3705293 109.4.1.2184 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30302 0.52 44.0 2.87e-01 93.6% 22.8%
3715165 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 44.0 3.04e-01 94.7% 29.3%
4980072 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 46.0 3.90e-01 98.9% 89.9%
3169559 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 43.0 2.70e-01 94.7% 20.7%
3414298 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 43.0 2.57e-01 94.7% 16.8%
3259882 109.4.1.134 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SPIN90_LRD 0.51 44.0 2.95e-01 92.6% 33.8%
3232473 603.1.1.97 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin, SNARE 0.51 44.0 3.31e-01 96.8% 57.1%
5068379 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.50 43.0 4.20e-01 95.7% 94.3%
4975787 4070.1.1.0 alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like 0.50 39.0 3.32e-01 84.0% 70.0%