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IMGVR_UViG_3300045988_181258-3300045988-Ga0495776_178587_48674_49816

Arc-Vir

IMGVR_UViG_3300045988_181258-3300045988-Ga0495776_178587_48674_49816

Quality

87.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-64
PDB
Domain cluster: representative
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4jcyA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.82 75.0 6.29e-01 100.0% 65.2%
2ewtA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.82 73.0 6.77e-01 100.0% 81.7%
1y7yA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.82 74.0 6.87e-01 100.0% 81.2%
1y9qA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.81 73.0 6.33e-01 100.0% 65.9%
2xcjA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.81 73.0 6.36e-01 100.0% 72.6%
3bs3A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.81 73.0 7.18e-01 100.0% 93.3%
3f51C00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.81 73.0 6.15e-01 100.0% 62.2%
7n1nB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.80 71.0 6.90e-01 100.0% 95.2%
3u3wA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.80 71.0 6.68e-01 100.0% 81.2%
6b9sB02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.80 70.0 6.45e-01 100.0% 76.7%
1lliA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.80 71.0 6.09e-01 100.0% 67.4%
2awiA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.80 70.0 6.60e-01 100.0% 82.1%
6rnzA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.80 71.0 6.73e-01 100.0% 89.4%
2xi8A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.79 71.0 6.75e-01 100.0% 84.8%
7zcvA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.79 70.0 6.80e-01 100.0% 92.1%
3zhiA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.79 70.0 6.42e-01 100.0% 90.4%
2kpjA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 70.0 6.47e-01 100.0% 80.0%
2r1jL00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 69.0 6.53e-01 100.0% 84.8%
7xi5A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 64.0 6.71e-01 91.1% 100.0%
3kxaA02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 67.0 6.39e-01 98.2% 83.3%
4ybaA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.76 67.0 6.05e-01 100.0% 84.4%
2ef8A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 66.0 5.82e-01 100.0% 78.6%
3op9A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 67.0 6.28e-01 100.0% 82.4%
3fyaB00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 65.0 5.93e-01 100.0% 76.6%
1r69A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 65.0 6.29e-01 100.0% 88.9%
2auwB02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 60.0 5.67e-01 92.9% 74.3%
1x57A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 64.0 5.50e-01 100.0% 65.9%
2ox6D00 1.10.3100.10 Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Putative cytoplasmic protein 0.73 61.0 4.37e-01 94.6% 32.3%
1ic8A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 61.0 5.16e-01 94.6% 59.6%
3ivpD01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 61.0 5.59e-01 100.0% 73.3%
2ictA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 61.0 5.48e-01 100.0% 70.4%
2ebyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 61.0 5.53e-01 100.0% 73.4%
4yg1A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 60.0 5.56e-01 100.0% 77.8%
1dw9A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.66 54.0 4.80e-01 100.0% 63.2%
4ivnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 51.0 4.70e-01 91.1% 82.9%
1neqA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.61 52.0 4.84e-01 100.0% 81.1%
8e9gE01 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.58 37.0 3.62e-01 85.7% 58.7%
2p0tA01 1.10.60.30 Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › PSPTO4464-like domains 0.56 46.0 4.24e-01 94.6% 85.5%
6hftA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.54 37.0 2.85e-01 71.4% 37.0%
2elcA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.53 36.0 3.45e-01 82.1% 59.7%
2cdqA02 1.20.120.1320 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartokinase, catalytic domain 0.51 40.0 3.48e-01 91.1% 76.3%
1lkvX02 1.10.220.30 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Flagellar motor switch protein FliG, alpha-alpha superhelical domain 0.51 39.0 3.15e-01 91.1% 67.4%
ECOD (96)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4537353 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.85 78.0 5.86e-01 100.0% 44.8%
2833991 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.84 77.0 7.27e-01 100.0% 86.2%
3956747 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.84 77.0 7.29e-01 100.0% 86.2%
3283172 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.84 77.0 4.85e-01 100.0% 22.0%
3508650 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.83 74.0 7.07e-01 100.0% 84.6%
3988654 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.83 73.0 7.00e-01 100.0% 84.6%
4425759 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.83 75.0 5.93e-01 100.0% 50.9%
3282040 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.83 76.0 6.49e-01 100.0% 69.4%
3957550 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.82 75.0 6.94e-01 100.0% 80.0%
3504520 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.82 74.0 6.08e-01 100.0% 57.0%
4038777 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.82 75.0 6.20e-01 100.0% 58.9%
5083215 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.82 75.0 7.10e-01 100.0% 86.2%
3977590 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.82 74.0 6.67e-01 100.0% 74.7%
3953562 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.82 74.0 6.85e-01 100.0% 80.0%
3954613 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.82 74.0 5.63e-01 100.0% 45.6%
3944738 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.82 74.0 6.68e-01 100.0% 74.7%
3969553 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.82 74.0 6.67e-01 100.0% 74.7%
3988789 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.82 72.0 6.53e-01 100.0% 73.3%
3972208 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.82 74.0 6.67e-01 100.0% 74.7%
4008186 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.81 73.0 5.66e-01 100.0% 46.7%
3587838 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.81 74.0 6.81e-01 100.0% 84.3%
3972189 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.81 74.0 6.65e-01 100.0% 74.7%
3987118 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.81 73.0 6.34e-01 100.0% 70.6%
4656409 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.81 72.0 6.73e-01 100.0% 80.0%
4010418 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.81 74.0 6.49e-01 100.0% 70.0%
3285836 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.81 73.0 6.43e-01 100.0% 75.0%
3988311 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.81 71.0 6.47e-01 100.0% 73.3%
4033847 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.81 73.0 5.88e-01 100.0% 53.3%
5003294 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.81 73.0 6.59e-01 100.0% 74.7%
3978391 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.81 73.0 6.77e-01 100.0% 80.0%
4605318 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.81 73.0 6.57e-01 100.0% 74.7%
140568 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.81 73.0 6.84e-01 100.0% 83.8%
3280189 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.81 72.0 6.54e-01 100.0% 74.7%
3277922 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.81 73.0 6.56e-01 100.0% 78.7%
166742 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.81 73.0 7.09e-01 100.0% 90.3%
4032323 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.80 73.0 6.91e-01 100.0% 86.2%
3277880 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.80 72.0 6.52e-01 100.0% 74.7%
5003089 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.80 72.0 6.68e-01 100.0% 80.0%
3987836 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.80 72.0 6.68e-01 100.0% 82.9%
4509221 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.80 72.0 5.48e-01 100.0% 44.8%
4952242 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.80 71.0 6.61e-01 100.0% 80.0%
3164312 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.80 72.0 6.35e-01 100.0% 70.0%
3976255 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.80 71.0 6.43e-01 100.0% 74.7%
3587893 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.80 72.0 5.87e-01 100.0% 56.0%
4026045 101.1.4.85 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3, PF28877 0.79 69.0 6.79e-01 100.0% 90.0%
4274007 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.79 71.0 6.27e-01 100.0% 70.0%
None 0.79 68.0 6.70e-01 94.6% 88.3%
3988959 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.79 70.0 6.72e-01 100.0% 86.2%
5050903 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.79 70.0 6.39e-01 100.0% 74.7%
4367316 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.79 70.0 5.52e-01 100.0% 48.7%
317430 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.79 69.0 6.49e-01 100.0% 82.1%
3588760 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.79 70.0 5.66e-01 100.0% 53.3%
4507416 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.79 70.0 5.61e-01 100.0% 50.9%
3941643 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.79 70.0 6.52e-01 100.0% 80.0%
4380868 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.78 70.0 5.58e-01 100.0% 50.9%
2773 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.78 69.0 6.25e-01 100.0% 76.6%
2581392 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.78 69.0 6.43e-01 100.0% 83.1%
3990067 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.78 70.0 6.18e-01 100.0% 70.0%
148652 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.78 69.0 5.93e-01 100.0% 62.9%
137778 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.78 69.0 6.54e-01 100.0% 83.6%
3287571 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.78 69.0 6.02e-01 100.0% 65.9%
4860587 101.1.1.9 alpha arrays › HTH › HTH › Three-helical HTH › HTH_3 0.78 68.0 6.14e-01 100.0% 75.6%
1185986 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.78 70.0 6.02e-01 100.0% 65.1%
5030212 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 69.0 6.40e-01 100.0% 90.0%
3985012 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 67.0 6.06e-01 100.0% 72.0%
3949869 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.77 66.0 6.12e-01 94.6% 75.7%
3285035 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 68.0 5.79e-01 100.0% 62.2%
2577290 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 66.0 5.93e-01 100.0% 72.8%
3965549 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 67.0 6.13e-01 100.0% 76.0%
3282671 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.76 68.0 6.22e-01 100.0% 76.7%
3506728 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.76 67.0 5.19e-01 100.0% 45.6%
3978875 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.76 67.0 5.30e-01 100.0% 48.7%
4943355 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.76 67.0 6.10e-01 100.0% 74.7%
4034513 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.76 67.0 6.56e-01 100.0% 93.3%
4950501 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.76 66.0 6.33e-01 100.0% 86.2%
5057975 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.76 65.0 5.94e-01 100.0% 73.3%
169675 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.76 65.0 5.80e-01 100.0% 72.0%
5013314 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.75 67.0 6.56e-01 100.0% 93.3%
4940726 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.75 66.0 6.31e-01 100.0% 86.2%
4975718 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.75 66.0 6.01e-01 100.0% 74.7%
5046258 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.75 64.0 5.90e-01 100.0% 73.3%
4956880 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.75 64.0 6.01e-01 100.0% 78.6%
3285630 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.75 66.0 6.00e-01 100.0% 89.3%
4392992 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.75 66.0 5.87e-01 100.0% 70.0%
4979598 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.75 65.0 6.09e-01 100.0% 80.0%
4335698 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.75 64.0 5.55e-01 100.0% 63.3%
3954383 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.74 64.0 5.77e-01 100.0% 76.2%
3589590 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.74 62.0 6.09e-01 94.6% 91.7%
4568698 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.74 63.0 6.20e-01 100.0% 91.7%
4455317 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.73 64.0 5.73e-01 100.0% 75.0%
4632225 101.1.4.27 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CYNS_N 0.73 62.0 5.53e-01 100.0% 67.1%
3180596 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.73 63.0 5.54e-01 100.0% 67.1%
5036222 101.1.4.16 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_25 0.73 63.0 6.07e-01 100.0% 86.2%
4940450 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.72 62.0 5.69e-01 100.0% 77.3%
4947991 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.72 64.0 5.81e-01 100.0% 78.7%
5065183 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.72 61.0 5.25e-01 100.0% 61.1%
D2 high residues 88-256
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06114.20 best Peptidase_M78 36.0 7.90e-09 48.5% 68.8%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1x31B01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 38.0 3.45e-01 70.4% 93.5%
3w3sA02 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.53 41.0 3.26e-01 81.7% 90.2%
2oqtD00 3.40.930.10 Alpha Beta › 3-Layer(aba) Sandwich › Mannitol-specific EII; Chain A › Mannitol-specific EII; Chain A 0.52 37.0 3.84e-01 72.8% 93.6%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3953982 2498.1.1.29 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 0.86 69.0 6.29e-01 94.7% 66.2%
4954380 2498.1.1.29 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 0.84 56.0 5.48e-01 73.4% 63.3%
3953551 2498.1.1.29 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 0.82 63.0 5.91e-01 91.1% 66.5%
5083216 2498.1.1.29 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 0.82 78.0 7.67e-01 100.0% 94.4%
3989086 2498.1.1.29 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 0.80 54.0 5.19e-01 76.3% 61.1%
4950654 2498.1.1.29 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 0.79 54.0 5.20e-01 78.7% 61.6%
3290645 2498.1.1.29 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 0.78 47.0 5.63e-01 71.6% 85.8%
3586986 2498.1.1.29 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 0.76 46.0 5.21e-01 71.0% 77.0%
3289507 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.70 50.0 5.51e-01 73.4% 97.1%
3291444 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.69 49.0 5.24e-01 72.8% 96.7%
3286933 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.69 49.0 5.43e-01 73.4% 91.0%
4033720 2498.1.1.29 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 0.68 47.0 4.83e-01 71.6% 73.8%
None 0.67 47.0 4.22e-01 72.2% 52.6%
4929032 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.59 35.0 3.63e-01 89.3% 61.3%
5014658 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.51 41.0 3.57e-01 100.0% 55.0%
3560172 2007.2.4.4 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphoinositide phosphatase › PF27561 0.50 37.0 2.66e-01 74.0% 90.1%
D3 high residues 328-378
PDB
Domain cluster: representative
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2jrtA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 60.0 5.13e-01 88.2% 53.5%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 52.0 5.50e-01 84.3% 100.0%
2k9sA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.65 50.0 4.04e-01 88.2% 43.9%
2w48B01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 48.0 4.85e-01 96.1% 84.6%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 52.0 4.68e-01 88.2% 65.7%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.64 46.0 3.45e-01 82.4% 29.1%
4fe7A03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 48.0 3.97e-01 90.2% 43.1%
5c9eB01 1.20.1280.80 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.63 54.0 4.61e-01 100.0% 71.3%
2p4wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 44.0 3.66e-01 90.2% 39.8%
2ia2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 46.0 4.33e-01 100.0% 66.2%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.61 46.0 4.54e-01 84.3% 100.0%
1jhgA00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.58 44.0 3.71e-01 90.2% 46.5%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 44.0 4.20e-01 98.0% 70.1%
4ev0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 46.0 4.17e-01 96.1% 64.9%
2zkzC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 41.0 3.63e-01 96.1% 48.3%
2v9vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 42.0 4.13e-01 90.2% 75.0%
8agaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 45.0 3.49e-01 94.1% 38.9%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.55 42.0 3.97e-01 86.3% 67.7%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.55 45.0 4.04e-01 96.1% 65.8%
3zdmB00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.54 41.0 4.14e-01 84.3% 92.0%
3cdlA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.53 43.0 4.28e-01 100.0% 100.0%
2id3A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.53 40.0 4.10e-01 92.2% 93.9%
2ip2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 40.0 3.67e-01 100.0% 77.4%
2dt5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 42.0 3.83e-01 100.0% 71.2%
2dflA01 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.50 39.0 3.81e-01 98.0% 81.7%
2r0bA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.50 39.0 2.95e-01 94.1% 33.1%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5062514 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.81 60.0 6.37e-01 82.4% 91.1%
5076135 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 61.0 5.83e-01 84.3% 71.7%
4937291 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.77 57.0 5.92e-01 82.4% 91.1%
5071071 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 60.0 5.43e-01 86.3% 62.9%
4263447 3801.1.1.4 extended segments › ParE2-associated antitoxin 2 (PaaA2) › ParE2-associated antitoxin 2 (PaaA2) › ParE2-associated antitoxin 2 (PaaA2) › UPF0175 0.75 55.0 5.72e-01 82.4% 91.1%
5064868 101.1.11.203 alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.75 58.0 4.83e-01 88.2% 48.9%
5029686 101.1.11.203 alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.74 57.0 5.08e-01 88.2% 58.7%
4332279 4156.1.1.6 alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Helicase_dom4_arc 0.74 61.0 4.23e-01 96.1% 45.0%
4989022 101.1.2.881 alpha arrays › HTH › HTH › winged helix domain › UPF0175 0.74 53.0 5.54e-01 80.4% 88.9%
4654073 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.73 57.0 5.11e-01 90.2% 60.0%
4965812 101.1.1.559 alpha arrays › HTH › HTH › Three-helical HTH › DUF7858 0.73 56.0 5.53e-01 96.1% 78.2%
5072014 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.73 56.0 5.02e-01 88.2% 58.7%
4965520 101.1.1.556 alpha arrays › HTH › HTH › Three-helical HTH › DUF7317 0.73 54.0 5.30e-01 84.3% 76.4%
5012367 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 61.0 6.02e-01 96.1% 87.3%
5013438 101.1.2.881 alpha arrays › HTH › HTH › winged helix domain › UPF0175 0.73 56.0 5.34e-01 88.2% 73.3%
4938759 101.1.8.14 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › UPF0175 0.72 57.0 5.59e-01 90.2% 81.8%
4966880 101.1.11.203 alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.72 57.0 4.67e-01 90.2% 47.4%
5077693 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.72 56.0 4.80e-01 90.2% 52.9%
4992527 101.1.11.203 alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.72 55.0 4.84e-01 88.2% 55.0%
5028174 101.1.11.203 alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.72 51.0 5.00e-01 78.4% 70.9%
3567273 101.1.1.35 alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.72 55.0 5.82e-01 90.2% 95.6%
5065596 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.72 55.0 4.81e-01 88.2% 55.0%
4350602 101.1.8.14 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › UPF0175 0.71 54.0 5.10e-01 90.2% 67.7%
4950777 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.70 54.0 4.93e-01 88.2% 62.9%
4970237 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.69 51.0 5.36e-01 86.3% 93.3%
5049179 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 50.0 4.84e-01 82.4% 68.3%
4994133 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.69 53.0 4.59e-01 90.2% 52.9%
3834548 101.1.3.12 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › PF26138 0.69 53.0 5.05e-01 98.0% 72.3%
4992556 101.1.11.203 alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.69 53.0 4.31e-01 90.2% 42.9%
5045749 101.1.11.203 alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.68 52.0 4.90e-01 90.2% 69.2%
3670113 101.1.1.129 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_4 0.68 55.0 4.73e-01 98.0% 60.0%
4944760 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 52.0 5.01e-01 98.0% 76.7%
5061082 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 48.0 5.06e-01 82.4% 100.0%
3469752 101.1.1.35 alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.67 50.0 5.18e-01 84.3% 93.3%
3448782 101.1.1.267 alpha arrays › HTH › HTH › Three-helical HTH › PF26138 0.66 50.0 4.24e-01 96.1% 46.0%
5010276 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.66 53.0 4.01e-01 96.1% 36.2%
4988665 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 48.0 4.49e-01 98.0% 64.6%
3501262 101.1.6.18 alpha arrays › HTH › HTH › TrpR › Zn_ribbon_ISL3 0.64 53.0 3.93e-01 100.0% 57.2%
3954433 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.64 47.0 4.85e-01 100.0% 95.6%
3602631 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.62 45.0 4.07e-01 100.0% 53.8%
3913655 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.62 48.0 4.36e-01 96.1% 63.7%
4143289 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.61 44.0 4.39e-01 82.4% 76.4%
4927188 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 44.0 4.37e-01 98.0% 76.4%
3517677 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.61 45.0 4.24e-01 82.4% 67.7%
3587739 101.1.2.66 alpha arrays › HTH › HTH › winged helix domain › Mga 0.61 45.0 4.16e-01 90.2% 61.4%
3882189 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.58 42.0 4.28e-01 78.4% 80.0%
4995430 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.56 46.0 3.92e-01 100.0% 76.8%
1149746 101.1.1.14 alpha arrays › HTH › HTH › Three-helical HTH › Integrase_Zn 0.54 39.0 4.03e-01 100.0% 89.6%
4991895 101.1.2.728 alpha arrays › HTH › HTH › winged helix domain › PF31122 0.54 43.0 3.88e-01 100.0% 100.0%
4919061 101.1.1.14 alpha arrays › HTH › HTH › Three-helical HTH › Integrase_Zn 0.54 39.0 4.01e-01 100.0% 97.7%
3930155 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 41.0 3.39e-01 96.1% 44.5%
4958800 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.52 44.0 3.27e-01 100.0% 60.7%
D4 medium residues 260-317
PDB