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IMGVR_UViG_3300045988_182168-3300045988-Ga0495776_012204_2832_3518
Arc-VirIMGVR_UViG_3300045988_182168-3300045988-Ga0495776_012204_2832_3518
Identity
- Kingdom:
- archaea
Quality
86.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-85
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13391.13 best | HNH_2 | 26.7 | 5.70e-06 | 68.8% | 73.1% |
| PF01844.30 | HNH | 25.7 | 1.40e-05 | 62.5% | 38.3% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3m7kA00 | 3.30.40.220 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.57 | 41.0 | 3.45e-01 | 100.0% | 43.0% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5080395 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.77 | 59.0 | 5.16e-01 | 100.0% | 55.7% |
| 3635140 | 378.1.1.9 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 | 0.64 | 51.0 | 4.54e-01 | 85.0% | 82.7% |
| 4974548 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.63 | 39.0 | 4.04e-01 | 73.8% | 65.8% |
| 3721920 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.57 | 50.0 | 3.44e-01 | 96.2% | 35.3% |
| 2814862 | 268.1.1.9 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › DUF7884 | 0.52 | 28.0 | 3.15e-01 | 72.5% | 69.0% |
| 3173835 | 377.1.1.46 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › AI2M-like_HNH | 0.50 | 30.0 | 3.50e-01 | 72.5% | 81.7% |
D2
high
residues 94-222
Domain cluster:
rep: IMGVR_UViG_3300045988_183283-3300045988-Ga0495776_029360_36517_36957__D1-24_43-140
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF20275.4 best | CTD10 | 29.7 | 1.20e-06 | 97.7% | 91.8% |