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IMGVR_UViG_3300045988_183057-3300045988-Ga0495776_085716_21248_21526
Arc-VirIMGVR_UViG_3300045988_183057-3300045988-Ga0495776_085716_21248_21526
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-91
Domain cluster:
rep: IMGVR_UViG_3300029847_000335-3300029847-Ga0245281_10074120__D9-97
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2mzrA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.62 | 45.0 | 4.24e-01 | 100.0% | 63.2% |
| 1kyfA02 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.57 | 52.0 | 4.57e-01 | 100.0% | 77.9% |
| 4r9pA00 | 2.60.200.10 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.57 | 43.0 | 3.20e-01 | 82.1% | 84.8% |
| 2kf2A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 50.0 | 3.93e-01 | 100.0% | 79.6% |
| 1jyaB00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.56 | 46.0 | 3.94e-01 | 100.0% | 57.0% |
| 3ktnA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.55 | 37.0 | 2.51e-01 | 70.5% | 26.2% |
| 2hzmG01 | 3.30.310.180 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.55 | 49.0 | 4.35e-01 | 100.0% | 69.6% |
| 2flhB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 48.0 | 3.91e-01 | 100.0% | 89.5% |
| 4xrtA02 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 47.0 | 3.82e-01 | 100.0% | 86.3% |
| 2qkpD00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 44.0 | 3.68e-01 | 87.2% | 73.9% |
| 4kreA04 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.55 | 41.0 | 2.91e-01 | 88.5% | 24.9% |
| 3caxA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 44.0 | 3.63e-01 | 87.2% | 67.4% |
| 1s2oA02 | 3.90.1070.10 | Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › | 0.54 | 34.0 | 3.52e-01 | 92.3% | 67.6% |
| 4bf3A00 | 2.30.31.50 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Borrelia outer surface protein E/F | 0.54 | 38.0 | 3.32e-01 | 76.9% | 88.0% |
| 6mw4A01 | 2.60.120.1290 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 48.0 | 4.05e-01 | 100.0% | 61.5% |
| 1ysqA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.53 | 42.0 | 3.23e-01 | 87.2% | 69.6% |
| 4ywzB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 42.0 | 3.43e-01 | 87.2% | 54.1% |
| 2d3o100 | 3.30.70.1050 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trigger factor ribosome-binding domain | 0.52 | 40.0 | 3.75e-01 | 87.2% | 97.0% |
| 5bpdA02 | 3.30.870.10 | Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A | 0.52 | 41.0 | 3.39e-01 | 87.2% | 82.5% |
| 1mkmA03 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.51 | 40.0 | 3.20e-01 | 87.2% | 71.5% |
| 3mq0B02 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.50 | 39.0 | 3.12e-01 | 87.2% | 69.8% |
| 5tjjB02 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.50 | 39.0 | 3.10e-01 | 87.2% | 69.7% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4960403 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.60 | 54.0 | 5.16e-01 | 100.0% | 94.4% |
| 3808998 | 331.3.1.28 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF220 | 0.58 | 50.0 | 3.79e-01 | 100.0% | 71.2% |
| 3216991 | 331.15.1.0 ↗ | a+b two layers › TBP-like › Anti-CRISPR protein AcrID1 › Anti-CRISPR protein AcrID1 | 0.58 | 43.0 | 4.10e-01 | 87.2% | 67.8% |
| 5007802 | 331.4.1.36 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › PF27851 | 0.57 | 51.0 | 5.09e-01 | 100.0% | 98.8% |
| 4928161 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.57 | 51.0 | 4.73e-01 | 100.0% | 86.0% |
| 3743072 | 3435.1.1.2 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › CENP-N | 0.57 | 50.0 | 4.12e-01 | 100.0% | 70.3% |
| 4928123 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 45.0 | 3.81e-01 | 87.2% | 66.2% |
| 5067842 | 223.1.1.27 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_10 | 0.56 | 46.0 | 3.73e-01 | 87.2% | 66.4% |
| 3290470 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.56 | 37.0 | 2.89e-01 | 87.2% | 33.1% |
| 4945413 | 223.1.1.27 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_10 | 0.56 | 45.0 | 3.75e-01 | 87.2% | 69.6% |
| 4955365 | 223.1.1.27 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_10 | 0.55 | 45.0 | 3.72e-01 | 87.2% | 70.4% |
| 3507923 | 2484.1.1.26 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi | 0.55 | 43.0 | 2.96e-01 | 88.5% | 23.5% |
| 3703112 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.54 | 44.0 | 3.76e-01 | 85.9% | 71.7% |
| 5046928 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.54 | 49.0 | 4.62e-01 | 100.0% | 84.2% |
| 5034417 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.54 | 49.0 | 4.69e-01 | 100.0% | 91.0% |
| 4988654 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.54 | 43.0 | 3.99e-01 | 87.2% | 97.0% |
| 4116942 | 2004.1.1.22 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sigma54_activat | 0.53 | 43.0 | 2.78e-01 | 87.2% | 26.1% |
| 3966283 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.53 | 43.0 | 3.54e-01 | 87.2% | 55.7% |
| 3499390 | 223.1.1.3 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF | 0.53 | 43.0 | 3.00e-01 | 87.2% | 58.3% |
| 3285565 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.53 | 42.0 | 3.86e-01 | 87.2% | 90.5% |
| 4979842 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 43.0 | 3.64e-01 | 87.2% | 55.2% |
| 3808257 | 331.4.1.33 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CCB1 | 0.53 | 46.0 | 4.50e-01 | 100.0% | 94.1% |
| 5039454 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.53 | 43.0 | 3.61e-01 | 87.2% | 75.4% |
| 3989882 | 217.2.1.1 ↗ | a+b complex topology › FAD-binding domain-like › CorC/HlyC domain-like › CorC/HlyC domain-like › CorC_HlyC | 0.52 | 42.0 | 4.13e-01 | 87.2% | 92.9% |
| 5001230 | 300.1.1.0 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease | 0.52 | 42.0 | 3.46e-01 | 87.2% | 81.8% |
| 5035198 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.52 | 43.0 | 3.18e-01 | 87.2% | 42.1% |
| 4959467 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.52 | 42.0 | 3.37e-01 | 87.2% | 64.1% |
| 2855513 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.52 | 42.0 | 2.80e-01 | 87.2% | 24.7% |
| 3170786 | 223.2.1.18 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Longin_2 | 0.52 | 41.0 | 3.24e-01 | 87.2% | 52.0% |
| 3582164 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.52 | 42.0 | 2.83e-01 | 87.2% | 30.3% |
| 4980679 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.52 | 42.0 | 3.74e-01 | 87.2% | 85.5% |
| 3715473 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.52 | 45.0 | 3.65e-01 | 100.0% | 50.3% |
| 3720034 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.51 | 42.0 | 3.40e-01 | 87.2% | 69.0% |
| 3612153 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.51 | 41.0 | 3.03e-01 | 89.7% | 73.8% |
| 4951932 | 223.1.1.3 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF | 0.51 | 42.0 | 2.79e-01 | 87.2% | 32.7% |
| 4988343 | 223.1.1.20 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › DUF3365 | 0.51 | 41.0 | 3.20e-01 | 87.2% | 46.3% |
| 3809120 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.51 | 41.0 | 3.48e-01 | 87.2% | 82.3% |
| 5080306 | 300.1.1.0 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease | 0.51 | 39.0 | 3.19e-01 | 87.2% | 74.5% |
| 4980695 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.51 | 41.0 | 3.65e-01 | 87.2% | 85.5% |
| 3552831 | 1.1.7.41 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom | 0.51 | 43.0 | 3.99e-01 | 100.0% | 76.2% |
| 5046056 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.51 | 41.0 | 3.42e-01 | 87.2% | 75.6% |
| 3998228 | 246.3.1.0 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like | 0.50 | 33.0 | 2.63e-01 | 87.2% | 28.6% |
| 4951664 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.50 | 40.0 | 3.27e-01 | 87.2% | 68.0% |
| 4928710 | 300.1.1.0 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease | 0.50 | 40.0 | 3.34e-01 | 87.2% | 85.0% |