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IMGVR_UViG_3300046049_000010-3300046049-Ga0496842_00094_55_210
Arc-VirIMGVR_UViG_3300046049_000010-3300046049-Ga0496842_00094_55_210
Identity
- Kingdom:
- archaea
Quality
77.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-49
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qbyB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 69.0 | 5.59e-01 | 100.0% | 50.5% |
| 6n2nA01 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.72 | 52.0 | 3.48e-01 | 77.1% | 45.5% |
| 4fcyA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.71 | 53.0 | 4.60e-01 | 100.0% | 51.3% |
| 1ci4A00 | 1.10.150.40 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Barrier-to-autointegration factor, BAF | 0.70 | 55.0 | 4.59e-01 | 100.0% | 48.9% |
| 2mh2A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 49.0 | 4.56e-01 | 100.0% | 60.9% |
| 3gwnA00 | 1.20.120.310 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain | 0.67 | 56.0 | 4.40e-01 | 100.0% | 86.7% |
| 3hi0A02 | 3.30.420.150 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 | 0.66 | 57.0 | 3.81e-01 | 97.9% | 68.3% |
| 5um2A02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.65 | 53.0 | 3.64e-01 | 89.6% | 64.4% |
| 2lrmA00 | 1.10.890.30 | Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A › YmgD protein | 0.64 | 49.0 | 4.16e-01 | 85.4% | 60.7% |
| 1x57A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.64 | 45.0 | 3.73e-01 | 97.9% | 40.7% |
| 2kq5A00 | 6.10.140.500 | Special › Helix non-globular › Helix Hairpins › | 0.61 | 43.0 | 4.30e-01 | 77.1% | 84.3% |
| 1x42A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.61 | 50.0 | 4.35e-01 | 100.0% | 95.2% |
| 7s03A01 | 1.10.10.1450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.61 | 51.0 | 5.08e-01 | 100.0% | 96.0% |
| 1vtnC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 49.0 | 4.06e-01 | 100.0% | 49.0% |
| 4mspB02 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.60 | 49.0 | 4.44e-01 | 100.0% | 72.0% |
| 3oxfA05 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.59 | 43.0 | 3.76e-01 | 79.2% | 68.0% |
| 3n4eA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.59 | 48.0 | 3.83e-01 | 93.8% | 87.5% |
| 1ng6A02 | 1.10.10.410 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.59 | 48.0 | 4.61e-01 | 95.8% | 80.7% |
| 3natA01 | 3.40.50.11250 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Protein of unknown function DUF3013 | 0.56 | 42.0 | 3.04e-01 | 81.2% | 86.4% |
| 1x4qA01 | 1.20.1390.10 | Mainly Alpha › Up-down Bundle › PWI domain › PWI domain | 0.55 | 44.0 | 4.01e-01 | 100.0% | 84.5% |
| 2r31A02 | 1.10.3580.10 | Mainly Alpha › Orthogonal Bundle › ATP12-like fold › ATP12 ATPase | 0.53 | 40.0 | 2.90e-01 | 91.7% | 99.4% |
| 2be4A01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.52 | 41.0 | 3.63e-01 | 95.8% | 93.8% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995716 | 101.43.1.0 ↗ | alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain | 0.79 | 69.0 | 6.50e-01 | 100.0% | 81.7% |
| 5048962 | 2003.1.9.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF | 0.79 | 69.0 | 4.15e-01 | 97.9% | 22.9% |
| 3584520 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 67.0 | 5.16e-01 | 100.0% | 42.7% |
| 3547329 | 101.1.1.21 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc5 | 0.77 | 68.0 | 5.65e-01 | 100.0% | 82.4% |
| 5060192 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 68.0 | 6.18e-01 | 100.0% | 76.9% |
| 3716252 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.77 | 64.0 | 4.19e-01 | 100.0% | 21.6% |
| 3873692 | 101.1.1.21 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc5 | 0.76 | 65.0 | 6.22e-01 | 95.8% | 92.7% |
| 3925094 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 62.0 | 6.00e-01 | 100.0% | 81.8% |
| 2639344 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.76 | 66.0 | 5.01e-01 | 100.0% | 44.4% |
| 3549847 | 101.1.2.394 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 | 0.76 | 65.0 | 3.87e-01 | 100.0% | 13.3% |
| 3680378 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 64.0 | 5.17e-01 | 100.0% | 59.0% |
| 3930423 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 59.0 | 5.56e-01 | 100.0% | 73.3% |
| 3927240 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 62.0 | 6.04e-01 | 100.0% | 85.5% |
| 2887752 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 62.0 | 5.55e-01 | 100.0% | 73.2% |
| 3905735 | 101.1.2.94 ↗ | alpha arrays › HTH › HTH › winged helix domain › ANAPC2 | 0.71 | 61.0 | 5.15e-01 | 100.0% | 57.6% |
| 3224502 | 101.1.1.75 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 | 0.71 | 62.0 | 5.95e-01 | 100.0% | 89.1% |
| 5040720 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.71 | 61.0 | 3.76e-01 | 100.0% | 17.6% |
| 3781058 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 63.0 | 6.01e-01 | 100.0% | 87.3% |
| 3940696 | 101.1.1.103 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF4817 | 0.69 | 55.0 | 5.54e-01 | 100.0% | 90.0% |
| 4936277 | 1045.1.1.0 ↗ | alpha bundles › Rad50-binding domain of Mre11 › Rad50-binding domain of Mre11 › Rad50-binding domain of Mre11 | 0.69 | 47.0 | 4.75e-01 | 70.8% | 83.3% |
| 3214724 | 101.1.1.75 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 | 0.68 | 57.0 | 5.24e-01 | 100.0% | 72.3% |
| 3185107 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.64 | 52.0 | 4.77e-01 | 100.0% | 70.0% |
| 3380070 | 101.43.1.3 ↗ | alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain › PF26175 | 0.63 | 49.0 | 4.74e-01 | 100.0% | 76.7% |
| 3988670 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.62 | 47.0 | 2.98e-01 | 81.2% | 17.9% |
| 3174958 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.59 | 51.0 | 4.90e-01 | 100.0% | 92.7% |
| 4927934 | 3009.1.1.0 ↗ | alpha arrays › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like | 0.56 | 40.0 | 4.13e-01 | 83.3% | 80.0% |