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IMGVR_UViG_3300046412_000421-3300046412-Ga0494519_001337_116_475

Arc-Vir

IMGVR_UViG_3300046412_000421-3300046412-Ga0494519_001337_116_475

Quality

88.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-110
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1jw9B00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.82 71.0 5.33e-01 100.0% 41.2%
4ii2A04 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.81 65.0 5.02e-01 99.1% 40.7%
1y8qB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.81 68.0 5.27e-01 100.0% 43.7%
1y8qC00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.76 69.0 4.90e-01 98.2% 57.2%
3h8vB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.75 65.0 5.06e-01 100.0% 45.5%
4ii2A02 3.40.50.12550 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Ubiquitin-activating enzyme E1, inactive adenylation domain, subdomain 2 0.72 61.0 4.78e-01 89.1% 79.7%
1tt5C01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.72 66.0 4.65e-01 98.2% 58.6%
1jnrB02 6.20.260.10 Special › Other non-globular › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Adenylylsulphate reductase, beta subunit, C-terminal domain 0.71 25.0 2.90e-01 83.6% 42.2%
3h5nD02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.70 65.0 4.88e-01 100.0% 44.3%
4bs9A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.70 64.0 5.15e-01 100.0% 63.9%
5ff5A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.68 59.0 4.55e-01 97.3% 43.2%
4p22A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.67 56.0 4.38e-01 89.1% 43.9%
3bxoA02 2.20.130.10 Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains 0.65 34.0 4.60e-01 96.4% 96.6%
1ryp100 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.57 45.0 3.63e-01 84.5% 92.3%
2ra8A01 2.20.140.10 Mainly Beta › Single Sheet › q64v53_bacfr protein fold › WGR domain 0.53 31.0 3.68e-01 74.5% 85.1%
ECOD (79)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
100072 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.85 61.0 4.70e-01 98.2% 37.3%
4948243 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.84 74.0 5.59e-01 100.0% 42.5%
5007857 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.83 72.0 5.41e-01 100.0% 41.6%
5074927 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.83 76.0 5.55e-01 100.0% 40.0%
5058483 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.83 74.0 5.60e-01 100.0% 43.3%
5049523 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.83 78.0 5.67e-01 100.0% 50.7%
4947557 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.82 75.0 5.64e-01 100.0% 43.3%
5045010 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.82 75.0 5.67e-01 100.0% 44.2%
4990966 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.82 75.0 5.58e-01 100.0% 42.9%
5025289 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.82 73.0 5.50e-01 100.0% 42.9%
4316051 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.82 73.0 5.31e-01 100.0% 38.1%
5070251 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.82 69.0 5.26e-01 96.4% 42.7%
3370951 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.82 76.0 5.32e-01 100.0% 34.8%
5033107 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.81 70.0 5.37e-01 100.0% 43.5%
3216984 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.81 71.0 5.49e-01 96.4% 46.5%
4665451 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.81 73.0 5.45e-01 99.1% 42.9%
4953176 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.81 70.0 5.23e-01 90.9% 44.1%
4034049 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.80 72.0 5.29e-01 100.0% 40.0%
3839883 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.80 71.0 5.30e-01 100.0% 41.2%
4982612 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.80 73.0 5.32e-01 100.0% 38.9%
5011976 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.80 72.0 5.18e-01 100.0% 36.8%
5072823 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.80 70.0 5.34e-01 100.0% 43.9%
3598221 2003.1.9.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins 0.80 74.0 5.37e-01 100.0% 39.3%
5049245 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.79 73.0 5.43e-01 100.0% 42.4%
4981875 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.79 74.0 5.54e-01 100.0% 46.8%
4943731 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.79 74.0 5.52e-01 100.0% 45.2%
4934210 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.78 74.0 5.18e-01 100.0% 55.2%
4975919 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.78 73.0 5.41e-01 100.0% 47.7%
3472721 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.78 74.0 4.56e-01 100.0% 73.7%
3385229 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.78 73.0 4.92e-01 100.0% 30.7%
5053508 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.78 74.0 4.86e-01 100.0% 65.1%
4426254 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.78 73.0 5.05e-01 100.0% 35.1%
3435792 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.77 74.0 5.01e-01 100.0% 55.0%
2883891 2003.1.9.2 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › UBA_E1_SCCH 0.77 70.0 4.44e-01 96.4% 69.7%
4028645 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.77 72.0 4.95e-01 100.0% 38.5%
3405840 2003.1.9.4 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF+UBA_E1_SCCH 0.77 73.0 4.64e-01 100.0% 70.0%
3773356 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.77 67.0 5.03e-01 99.1% 41.2%
3557847 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.77 73.0 4.69e-01 100.0% 71.8%
4943147 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.77 73.0 5.36e-01 100.0% 48.2%
4025376 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.77 67.0 4.63e-01 92.7% 52.2%
4025224 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.76 72.0 5.25e-01 100.0% 41.1%
3867913 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.76 70.0 4.86e-01 99.1% 60.3%
None 0.76 72.0 4.94e-01 100.0% 56.4%
4026666 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.76 72.0 4.61e-01 100.0% 70.9%
5064667 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.76 71.0 5.15e-01 100.0% 49.6%
4026529 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.76 71.0 5.06e-01 100.0% 59.7%
None 0.76 69.0 4.00e-01 96.4% 44.4%
3877267 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.75 68.0 4.03e-01 96.4% 42.4%
3103201 2003.1.9.4 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF+UBA_E1_SCCH 0.75 68.0 4.30e-01 96.4% 70.2%
3633511 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.75 66.0 4.07e-01 92.7% 73.9%
3496931 2003.1.9.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins 0.75 71.0 5.36e-01 100.0% 51.2%
3701772 2003.1.9.4 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF+UBA_E1_SCCH 0.75 70.0 4.08e-01 99.1% 45.4%
3594589 2003.1.9.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins 0.75 69.0 4.04e-01 98.2% 46.1%
3739114 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.75 65.0 4.12e-01 92.7% 73.8%
None 0.75 70.0 4.07e-01 99.1% 44.3%
None 0.75 70.0 4.05e-01 99.1% 44.3%
3610518 6076.1.1.0 alpha arrays › Catalytic cysteine domain in ubiquitin-activating enzyme › Catalytic cysteine domain in ubiquitin-activating enzyme › Catalytic cysteine domain in ubiquitin-activating enzyme 0.75 68.0 3.95e-01 97.3% 46.0%
5048962 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.75 71.0 4.92e-01 100.0% 54.9%
3582047 6076.1.1.0 alpha arrays › Catalytic cysteine domain in ubiquitin-activating enzyme › Catalytic cysteine domain in ubiquitin-activating enzyme › Catalytic cysteine domain in ubiquitin-activating enzyme 0.75 70.0 4.04e-01 99.1% 44.2%
3741501 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.74 69.0 5.11e-01 100.0% 42.4%
3270407 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.74 68.0 4.80e-01 98.2% 57.5%
3952393 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.74 69.0 5.00e-01 100.0% 46.7%
4030383 6076.1.1.1 alpha arrays › Catalytic cysteine domain in ubiquitin-activating enzyme › Catalytic cysteine domain in ubiquitin-activating enzyme › Catalytic cysteine domain in ubiquitin-activating enzyme › UBA_E1_SCCH 0.74 69.0 4.01e-01 100.0% 43.4%
3817679 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.73 67.0 4.21e-01 98.2% 74.5%
5082135 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.73 69.0 5.12e-01 100.0% 47.2%
3556488 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.72 66.0 4.16e-01 98.2% 74.2%
3600617 2003.1.9.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins 0.72 63.0 3.66e-01 92.7% 83.2%
3783934 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.72 66.0 4.11e-01 97.3% 74.9%
4029086 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.72 62.0 3.84e-01 92.7% 77.7%
3496761 2003.1.9.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins 0.72 66.0 4.31e-01 98.2% 90.7%
3498084 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.70 65.0 4.58e-01 97.3% 42.0%
4534476 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.70 64.0 4.79e-01 100.0% 48.5%
3492134 2003.1.9.8 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF, E1_4HB 0.69 57.0 4.05e-01 88.2% 53.2%
5000465 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.68 62.0 4.72e-01 96.4% 45.5%
4980248 7089.1.1.0 a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.58 30.0 3.86e-01 70.9% 91.4%
4027783 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.57 47.0 3.04e-01 86.4% 68.0%
4947618 2007.1.3.69 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Radical_SAM 0.52 33.0 2.80e-01 98.2% 37.3%
5058372 2007.1.3.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding 0.51 33.0 2.82e-01 99.1% 36.9%
5023931 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.51 26.0 3.14e-01 72.7% 72.9%