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IMGVR_UViG_3300046451_002625-3300046451-Ga0491205_0029842_70_219
Arc-VirIMGVR_UViG_3300046451_002625-3300046451-Ga0491205_0029842_70_219
Identity
- Kingdom:
- archaea
Quality
78.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-44
Domain cluster:
representative
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3o2pE00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 52.0 | 4.10e-01 | 73.8% | 39.5% |
| 3c7jA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 48.0 | 3.66e-01 | 73.8% | 31.9% |
| 2hs5A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 47.0 | 4.01e-01 | 71.4% | 41.8% |
| 3edpA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 45.0 | 3.69e-01 | 73.8% | 38.2% |
| 4h0eA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 44.0 | 3.76e-01 | 73.8% | 41.4% |
| 1c0wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 44.0 | 3.68e-01 | 71.4% | 38.4% |
| 2h09A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 44.0 | 3.73e-01 | 73.8% | 40.8% |
| 3bwgB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 44.0 | 3.80e-01 | 73.8% | 42.0% |
| 2isyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 43.0 | 3.05e-01 | 71.4% | 20.3% |
| 3by6C01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 43.0 | 3.62e-01 | 73.8% | 37.7% |
| 2hr3D02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 43.0 | 3.83e-01 | 73.8% | 46.8% |
| 2o0yB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 42.0 | 3.72e-01 | 73.8% | 44.6% |
| 1jhfA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 42.0 | 3.67e-01 | 73.8% | 43.5% |
| 1on2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 46.0 | 3.84e-01 | 78.6% | 59.7% |
| 4o5vA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 45.0 | 3.81e-01 | 78.6% | 60.6% |
| 2qenA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 43.0 | 3.73e-01 | 73.8% | 48.6% |
| 1e1hB01 | 1.20.58.540 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 42.0 | 3.30e-01 | 73.8% | 65.0% |
| 3tqnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 40.0 | 3.47e-01 | 73.8% | 39.7% |
| 4ha8A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 43.0 | 3.79e-01 | 76.2% | 71.4% |
| 4tv7D01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 47.0 | 3.81e-01 | 88.1% | 56.5% |
| 3df8A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 42.0 | 3.23e-01 | 76.2% | 42.2% |
| 2l4mA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 40.0 | 3.53e-01 | 73.8% | 43.5% |
| 3r4kB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 40.0 | 3.60e-01 | 73.8% | 69.8% |
| 4mtdD01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 40.0 | 3.25e-01 | 73.8% | 35.2% |
| 2plyB01 | 1.10.10.2770 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.57 | 39.0 | 2.81e-01 | 73.8% | 22.5% |
| 1j75A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 38.0 | 3.58e-01 | 76.2% | 50.9% |
| 5c17A00 | 3.30.450.410 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.57 | 44.0 | 2.99e-01 | 97.6% | 80.6% |
| 2ek5B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 45.0 | 3.45e-01 | 95.2% | 51.4% |
| 3b73B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 45.0 | 3.67e-01 | 97.6% | 62.9% |
| 1bjaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 45.0 | 3.50e-01 | 92.9% | 49.5% |
| 1i27A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 37.0 | 3.26e-01 | 73.8% | 41.1% |
| 5y6iA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 41.0 | 3.66e-01 | 92.9% | 71.2% |
| 2zj2A03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 42.0 | 3.47e-01 | 92.9% | 70.2% |
| 6az6A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 42.0 | 3.57e-01 | 95.2% | 66.7% |
| 2g9wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 37.0 | 3.29e-01 | 76.2% | 47.8% |
| 2v7fA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 36.0 | 2.69e-01 | 83.3% | 97.1% |
| 1hw1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 41.0 | 3.49e-01 | 95.2% | 64.0% |
| 5i41B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.50 | 34.0 | 3.13e-01 | 76.2% | 68.7% |
| 1xtfA00 | 3.90.1240.10 | Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" | 0.50 | 39.0 | 2.34e-01 | 100.0% | 83.6% |
| 5lewA03 | 1.10.10.1600 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Bacterial DNA polymerase III alpha subunit, thumb domain | 0.50 | 34.0 | 3.08e-01 | 76.2% | 67.1% |
| 1iq8A02 | 3.90.1020.10 | Alpha Beta › Alpha-Beta Complex › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 2 › ArcTGT, C1 domain | 0.50 | 34.0 | 2.98e-01 | 71.4% | 58.6% |
ECOD (59)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3971433 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 48.0 | 4.10e-01 | 73.8% | 44.6% |
| 4304583 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 50.0 | 4.32e-01 | 76.2% | 47.7% |
| 3288783 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.70 | 46.0 | 3.67e-01 | 71.4% | 32.9% |
| 3941861 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.68 | 45.0 | 3.73e-01 | 73.8% | 38.7% |
| None | — | 0.67 | 44.0 | 3.59e-01 | 73.8% | 36.3% | |
| 5050212 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 46.0 | 3.58e-01 | 76.2% | 32.6% |
| 5010525 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 46.0 | 3.78e-01 | 73.8% | 39.2% |
| 3284047 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.65 | 47.0 | 3.81e-01 | 81.0% | 55.3% |
| 5042174 | 101.1.2.652 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C | 0.64 | 48.0 | 3.33e-01 | 81.0% | 35.6% |
| 5027549 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.63 | 43.0 | 3.51e-01 | 73.8% | 37.5% |
| 3780643 | 101.1.2.36 ↗ | alpha arrays › HTH › HTH › winged helix domain › z-alpha | 0.63 | 43.0 | 3.52e-01 | 73.8% | 37.5% |
| 3597985 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 44.0 | 3.67e-01 | 76.2% | 41.2% |
| 3942904 | 101.1.2.92 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_11 | 0.63 | 42.0 | 3.68e-01 | 76.2% | 44.6% |
| 4026195 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 43.0 | 3.73e-01 | 76.2% | 50.7% |
| None | — | 0.63 | 44.0 | 3.14e-01 | 76.2% | 33.1% | |
| 4975458 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 41.0 | 3.81e-01 | 73.8% | 50.0% |
| 4928591 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 42.0 | 3.71e-01 | 73.8% | 46.2% |
| 5077926 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.62 | 45.0 | 3.15e-01 | 78.6% | 35.6% |
| 4943276 | 101.1.2.652 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C | 0.62 | 44.0 | 3.10e-01 | 78.6% | 31.7% |
| 4276676 | 101.1.2.280 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_12 | 0.62 | 42.0 | 3.57e-01 | 73.8% | 44.0% |
| 4974418 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 41.0 | 3.63e-01 | 76.2% | 45.3% |
| None | — | 0.61 | 44.0 | 3.04e-01 | 78.6% | 29.7% | |
| 3280479 | 101.1.2.26 ↗ | alpha arrays › HTH › HTH › winged helix domain › HxlR | 0.61 | 42.0 | 3.41e-01 | 76.2% | 48.9% |
| 4595468 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.61 | 41.0 | 3.60e-01 | 73.8% | 44.6% |
| 4989447 | 101.1.2.927 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7347 | 0.61 | 40.0 | 3.26e-01 | 73.8% | 32.6% |
| 3284500 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.61 | 44.0 | 3.58e-01 | 78.6% | 55.0% |
| 4982611 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 46.0 | 3.28e-01 | 88.1% | 41.7% |
| 3700467 | 101.1.2.97 ↗ | alpha arrays › HTH › HTH › winged helix domain › RPA_C | 0.60 | 41.0 | 3.41e-01 | 73.8% | 38.1% |
| 5005217 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 41.0 | 3.71e-01 | 73.8% | 51.7% |
| 3963361 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.59 | 44.0 | 3.92e-01 | 90.5% | 72.9% |
| 3965527 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 40.0 | 3.31e-01 | 73.8% | 37.6% |
| 2578 | 101.1.2.110 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_IclR | 0.59 | 44.0 | 3.82e-01 | 90.5% | 73.3% |
| 4940863 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 43.0 | 3.66e-01 | 90.5% | 73.5% |
| 4947701 | 101.1.2.882 ↗ | alpha arrays › HTH › HTH › winged helix domain › FeoA | 0.58 | 40.0 | 3.14e-01 | 76.2% | 43.0% |
| 4326472 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 40.0 | 3.65e-01 | 73.8% | 55.0% |
| 3593172 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 40.0 | 3.31e-01 | 76.2% | 37.6% |
| 3976914 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.57 | 38.0 | 3.37e-01 | 71.4% | 41.4% |
| 5044288 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 39.0 | 3.28e-01 | 73.8% | 41.2% |
| 5011992 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 43.0 | 3.19e-01 | 92.9% | 37.8% |
| 4986171 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.56 | 40.0 | 3.17e-01 | 76.2% | 38.9% |
| 3167244 | 101.1.2.499 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_MCM7 | 0.56 | 38.0 | 3.36e-01 | 73.8% | 44.3% |
| 4927049 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.56 | 45.0 | 3.47e-01 | 92.9% | 55.0% |
| 4994588 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 37.0 | 2.97e-01 | 71.4% | 30.0% |
| 5033689 | 101.1.2.368 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_36 | 0.55 | 37.0 | 3.46e-01 | 73.8% | 53.3% |
| 4018994 | 101.1.2.499 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_MCM7 | 0.55 | 37.0 | 3.17e-01 | 73.8% | 38.7% |
| 5048467 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 43.0 | 3.05e-01 | 92.9% | 33.8% |
| 3580194 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 39.0 | 3.30e-01 | 81.0% | 55.0% |
| 3222445 | 148.1.3.41 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM5_C | 0.54 | 36.0 | 3.27e-01 | 73.8% | 47.8% |
| 5074774 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 35.0 | 2.91e-01 | 71.4% | 34.4% |
| 3237702 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 37.0 | 3.03e-01 | 78.6% | 45.9% |
| 3961627 | 101.1.2.110 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_IclR | 0.52 | 40.0 | 3.90e-01 | 92.9% | 94.0% |
| 4083434 | 5069.1.1.53 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › UPF0182 | 0.52 | 41.0 | 2.87e-01 | 100.0% | 78.9% |
| 3724649 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.52 | 40.0 | 2.53e-01 | 95.2% | 92.1% |
| 3262478 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 35.0 | 3.12e-01 | 73.8% | 44.3% |
| 4926787 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 43.0 | 3.67e-01 | 97.6% | 64.0% |
| 4974022 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.51 | 40.0 | 3.34e-01 | 95.2% | 55.3% |
| 3189474 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.51 | 39.0 | 2.45e-01 | 95.2% | 94.2% |
| 2326885 | 101.1.2.543 ↗ | alpha arrays › HTH › HTH › winged helix domain › AprA_N | 0.50 | 40.0 | 3.25e-01 | 95.2% | 53.8% |
| 5036096 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 39.0 | 3.05e-01 | 92.9% | 48.2% |