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IMGVR_UViG_3300046485_000143-3300046485-Ga0495440_0004875_2802_3245
Arc-VirIMGVR_UViG_3300046485_000143-3300046485-Ga0495440_0004875_2802_3245
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 38-123
Domain cluster:
rep: IMGVR_UViG_3300050021_000629-3300050021-Ga0494719_017190_1185_1547__D36-114
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2z16B01 | 1.20.91.10 | Mainly Alpha › Up-down Bundle › Influenza Virus Matrix Protein; Chain A, domain 1 › Influenza matrix M1, N-terminal subdomain 1 | 0.60 | 37.0 | 3.91e-01 | 75.6% | 67.9% |
| 2fyuI00 | 2.10.210.10 | Mainly Beta › Ribbon › Cytochrome Bc1 Complex; Chain I › Cytochrome Bc1 Complex; Chain I | 0.54 | 33.0 | 3.74e-01 | 97.7% | 91.2% |
| 1eb6A00 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.51 | 41.0 | 3.38e-01 | 91.9% | 98.3% |
| 2be4A01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.50 | 36.0 | 3.74e-01 | 79.1% | 97.5% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5077628 | 3103.1.1.0 ↗ | alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN | 0.67 | 52.0 | 5.25e-01 | 81.4% | 96.5% |
| 3301383 | 4.1.1.141 ↗ | beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor | 0.56 | 28.0 | 3.60e-01 | 98.8% | 84.0% |
| 3810217 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 28.0 | 3.56e-01 | 98.8% | 84.0% |
| 4045124 | 7014.1.1.2 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › TauE | 0.53 | 39.0 | 2.79e-01 | 95.3% | 24.9% |
| 4984277 | 2005.1.1.4 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase | 0.52 | 42.0 | 2.82e-01 | 89.5% | 60.8% |
| 4011495 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 30.0 | 3.12e-01 | 90.7% | 60.0% |
| 5069526 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.52 | 35.0 | 3.52e-01 | 70.9% | 69.4% |