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IMGVR_UViG_3300047382_000848-3300047382-Ga0494416_0011137_1_1053
Arc-VirIMGVR_UViG_3300047382_000848-3300047382-Ga0494416_0011137_1_1053
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 182-226_246-258
Domain cluster:
representative
D2
medium
residues 275-350
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1iq8A01 | 3.20.20.105 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Queuine tRNA-ribosyltransferase-like | 0.98 | 94.0 | 5.79e-01 | 100.0% | 21.4% |
| 1pgjA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.72 | 52.0 | 3.52e-01 | 75.0% | 67.8% |
| 2oebA00 | 1.10.520.30 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › AF1862-like domain | 0.68 | 57.0 | 4.52e-01 | 90.8% | 76.3% |
| 4p1eA00 | 3.40.190.170 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 | 0.65 | 51.0 | 3.43e-01 | 85.5% | 59.8% |
| 2gf4A00 | 1.20.1270.110 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Uncharacterised protein family UPF0058 | 0.62 | 50.0 | 4.81e-01 | 88.2% | 81.8% |
| 4mhfA00 | 3.40.190.170 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 | 0.62 | 47.0 | 3.14e-01 | 81.6% | 54.2% |
| 4upkA01 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.62 | 53.0 | 3.24e-01 | 93.4% | 66.3% |
| 4pbhA00 | 3.40.190.170 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 | 0.62 | 53.0 | 3.51e-01 | 94.7% | 75.3% |
| 3bfmA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.59 | 45.0 | 3.45e-01 | 82.9% | 92.2% |
| 6qr4B02 | 1.10.1270.20 | Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › tRNA(m1g37)methyltransferase, domain 2 | 0.58 | 40.0 | 4.52e-01 | 78.9% | 96.4% |
| 3psfA03 | 1.10.3500.10 | Mainly Alpha › Orthogonal Bundle › Tex N-terminal region-like › Tex N-terminal region-like | 0.56 | 47.0 | 3.11e-01 | 92.1% | 43.6% |
| 2p0tA01 | 1.10.60.30 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › PSPTO4464-like domains | 0.53 | 40.0 | 4.03e-01 | 98.7% | 80.3% |
| 2odaA00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.53 | 40.0 | 2.96e-01 | 80.3% | 82.8% |
| 4o8mD00 | 3.40.190.170 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 | 0.53 | 45.0 | 3.02e-01 | 94.7% | 70.1% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5047529 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.99 | 96.0 | 5.83e-01 | 100.0% | 20.8% |
| 4138803 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.98 | 95.0 | 5.83e-01 | 100.0% | 21.1% |
| 5000492 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.98 | 95.0 | 5.74e-01 | 100.0% | 20.0% |
| 4945925 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.98 | 94.0 | 5.74e-01 | 100.0% | 20.3% |
| 4948239 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.97 | 94.0 | 5.76e-01 | 100.0% | 21.4% |
| 5054827 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.97 | 94.0 | 5.76e-01 | 100.0% | 21.4% |
| 5049216 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.97 | 94.0 | 5.76e-01 | 100.0% | 21.7% |
| 4968912 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.96 | 93.0 | 5.66e-01 | 100.0% | 20.5% |
| 4979409 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.96 | 92.0 | 5.71e-01 | 100.0% | 21.7% |
| 5020471 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.96 | 92.0 | 5.87e-01 | 100.0% | 25.3% |
| 5026764 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.96 | 92.0 | 5.60e-01 | 100.0% | 20.5% |
| 4930897 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.96 | 91.0 | 5.87e-01 | 100.0% | 26.2% |
| 4936680 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.95 | 90.0 | 6.11e-01 | 100.0% | 32.3% |
| 4963268 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.94 | 80.0 | 5.28e-01 | 100.0% | 25.7% |
| 5034933 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.93 | 82.0 | 5.30e-01 | 100.0% | 24.6% |
| 4989213 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.91 | 81.0 | 5.22e-01 | 100.0% | 24.1% |
| 4939842 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.91 | 83.0 | 5.70e-01 | 100.0% | 32.4% |
| 4976669 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.91 | 86.0 | 5.55e-01 | 100.0% | 25.3% |
| 5083509 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.91 | 76.0 | 5.05e-01 | 100.0% | 25.8% |
| 5045828 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.88 | 80.0 | 5.19e-01 | 100.0% | 24.7% |
| 5053011 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.86 | 80.0 | 5.03e-01 | 100.0% | 22.0% |
| 5007787 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.84 | 73.0 | 5.09e-01 | 100.0% | 31.6% |
| 3533358 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.69 | 49.0 | 4.50e-01 | 72.4% | 81.1% |
| 10186 | 2011.1.1.10 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › FGase | 0.65 | 46.0 | 3.18e-01 | 73.7% | 92.1% |
| 3719975 | 4095.1.1.1 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N | 0.64 | 40.0 | 3.29e-01 | 76.3% | 34.3% |
| 4420734 | 5065.1.1.2 ↗ | alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › FecCD | 0.59 | 50.0 | 3.35e-01 | 93.4% | 77.7% |
| 3992404 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.54 | 46.0 | 4.43e-01 | 93.4% | 89.4% |