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IMGVR_UViG_3300047645_000022-3300047645-Ga0497324_002391_1_393
Arc-VirIMGVR_UViG_3300047645_000022-3300047645-Ga0497324_002391_1_393
Identity
- Kingdom:
- archaea
Quality
88.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 70-130
Domain cluster:
representative
CATH (78)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fs2B00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.79 | 58.0 | 4.37e-01 | 100.0% | 34.1% |
| 3lbeB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.79 | 56.0 | 4.32e-01 | 100.0% | 36.3% |
| 3e29B00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.79 | 55.0 | 4.14e-01 | 100.0% | 32.8% |
| 2hngA00 | 3.10.420.10 | Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like | 0.76 | 58.0 | 4.55e-01 | 86.9% | 40.0% |
| 1pn2B01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.75 | 56.0 | 4.16e-01 | 88.5% | 32.4% |
| 2gvhB02 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.74 | 59.0 | 4.70e-01 | 98.4% | 44.4% |
| 2v1oB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.72 | 61.0 | 4.56e-01 | 100.0% | 37.8% |
| 1c8uA01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.72 | 48.0 | 3.55e-01 | 86.9% | 26.9% |
| 2f1cX00 | 2.40.160.40 | Mainly Beta › Beta Barrel › Porin › monomeric porin ompg | 0.72 | 60.0 | 3.96e-01 | 93.4% | 34.5% |
| 2gvhC01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.71 | 63.0 | 4.82e-01 | 98.4% | 78.7% |
| 1bh3A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.70 | 53.0 | 3.40e-01 | 88.5% | 17.3% |
| 1yliB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.70 | 61.0 | 4.53e-01 | 98.4% | 39.2% |
| 1njkA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.69 | 54.0 | 4.13e-01 | 98.4% | 38.3% |
| 2je8A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.69 | 57.0 | 4.67e-01 | 90.2% | 69.1% |
| 3bf2A00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.69 | 60.0 | 4.79e-01 | 100.0% | 50.4% |
| 2pzhA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.69 | 62.0 | 4.74e-01 | 100.0% | 46.3% |
| 4kwyA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.69 | 60.0 | 4.66e-01 | 100.0% | 46.0% |
| 3bb9B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.68 | 54.0 | 4.23e-01 | 98.4% | 41.6% |
| 4f8lA00 | 2.60.40.3590 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.68 | 57.0 | 4.34e-01 | 91.8% | 73.9% |
| 3gwrB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.68 | 53.0 | 4.14e-01 | 98.4% | 40.2% |
| 6wilA01 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.67 | 60.0 | 3.71e-01 | 100.0% | 24.5% |
| 2f86B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.67 | 55.0 | 4.36e-01 | 96.7% | 43.4% |
| 2rfrA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.67 | 52.0 | 4.00e-01 | 100.0% | 35.1% |
| 1egjA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 53.0 | 4.52e-01 | 86.9% | 70.3% |
| 3butA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 55.0 | 4.29e-01 | 88.5% | 72.0% |
| 2qomB00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.67 | 59.0 | 3.85e-01 | 100.0% | 29.0% |
| 3bvxA05 | 2.60.40.1360 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.66 | 52.0 | 4.48e-01 | 85.2% | 95.8% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.66 | 58.0 | 4.31e-01 | 100.0% | 41.3% |
| 1qunI01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 52.0 | 4.28e-01 | 88.5% | 76.5% |
| 5da9A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 50.0 | 3.12e-01 | 88.5% | 14.7% |
| 4ojdH01 | 2.60.98.60 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Cell-cell fusogen EFF/AFF, domain 1 | 0.65 | 51.0 | 3.75e-01 | 86.9% | 44.5% |
| 3ndzE00 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 56.0 | 4.65e-01 | 96.7% | 84.1% |
| 6a5gA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 55.0 | 4.25e-01 | 98.4% | 43.4% |
| 5dcaA08 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.63 | 55.0 | 4.58e-01 | 98.4% | 75.5% |
| 5jenA01 | 3.30.565.40 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like | 0.63 | 46.0 | 3.81e-01 | 88.5% | 42.3% |
| 3a76A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 51.0 | 3.96e-01 | 100.0% | 39.6% |
| 3cu3A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 48.0 | 3.61e-01 | 100.0% | 32.1% |
| 6wimA01 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.63 | 55.0 | 3.39e-01 | 100.0% | 27.0% |
| 3cygA01 | 3.30.565.40 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like | 0.63 | 52.0 | 4.17e-01 | 91.8% | 50.4% |
| 5m59A06 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.62 | 55.0 | 4.50e-01 | 98.4% | 76.8% |
| 3rnsA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 49.0 | 3.98e-01 | 83.6% | 81.5% |
| 4gb5A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 54.0 | 4.07e-01 | 96.7% | 44.6% |
| 3robA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 51.0 | 4.07e-01 | 98.4% | 43.5% |
| 3efmA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.62 | 53.0 | 3.21e-01 | 100.0% | 24.5% |
| 1fx3B00 | 3.10.420.10 | Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like | 0.62 | 54.0 | 4.12e-01 | 100.0% | 41.6% |
| 1h6eA02 | 2.60.40.1170 | Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B | 0.62 | 52.0 | 4.40e-01 | 95.1% | 86.7% |
| 3vrdB03 | 3.90.760.10 | Alpha Beta › Alpha-Beta Complex › Flavocytochrome C Sulfide Dehydrogenase; Chain A Domain 3 › Flavocytochrome c sulphide dehydrogenase, flavin-binding domain | 0.62 | 48.0 | 4.53e-01 | 85.2% | 75.7% |
| 3vl9B00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.62 | 50.0 | 3.41e-01 | 90.2% | 87.3% |
| 8alzB04 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.62 | 54.0 | 4.48e-01 | 100.0% | 79.1% |
| 5tseA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.61 | 54.0 | 4.20e-01 | 100.0% | 47.1% |
| 2r76A00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.61 | 55.0 | 4.24e-01 | 100.0% | 68.9% |
| 1aq3A00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.61 | 49.0 | 3.87e-01 | 88.5% | 62.0% |
| 3wodG00 | 2.30.30.1250 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 43.0 | 3.43e-01 | 82.0% | 36.2% |
| 3kkgA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 50.0 | 3.78e-01 | 93.4% | 38.9% |
| 3b8lA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 47.0 | 3.60e-01 | 96.7% | 36.9% |
| 5n1tA03 | 3.90.760.10 | Alpha Beta › Alpha-Beta Complex › Flavocytochrome C Sulfide Dehydrogenase; Chain A Domain 3 › Flavocytochrome c sulphide dehydrogenase, flavin-binding domain | 0.60 | 46.0 | 4.38e-01 | 83.6% | 76.1% |
| 3s5tA01 | 3.30.565.40 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like | 0.60 | 53.0 | 3.96e-01 | 100.0% | 45.8% |
| 5fokA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.60 | 49.0 | 2.93e-01 | 96.7% | 19.1% |
| 5ig0A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 50.0 | 3.94e-01 | 100.0% | 44.3% |
| 2vzsA05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 52.0 | 4.41e-01 | 100.0% | 80.2% |
| 3d4gE03 | 2.60.40.3210 | Mainly Beta › Sandwich › Immunoglobulin-like › Zona pellucida, ZP-N domain | 0.59 | 45.0 | 3.91e-01 | 86.9% | 78.2% |
| 6gmhC01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.59 | 52.0 | 3.96e-01 | 98.4% | 77.7% |
| 3o0lA00 | 2.60.40.3230 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 51.0 | 4.26e-01 | 100.0% | 71.6% |
| 3sy9C01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.58 | 49.0 | 3.10e-01 | 100.0% | 33.1% |
| 3rnsA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 43.0 | 3.67e-01 | 82.0% | 88.0% |
| 2ozjA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 44.0 | 3.62e-01 | 83.6% | 80.7% |
| 3hrdB01 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.56 | 47.0 | 3.59e-01 | 100.0% | 87.8% |
| 6qj2A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 43.0 | 2.78e-01 | 88.5% | 32.3% |
| 1es0A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 48.0 | 4.13e-01 | 100.0% | 77.8% |
| 1gkuB07 | 2.60.510.20 | Mainly Beta › Sandwich › EV matrix protein fold › | 0.55 | 49.0 | 4.08e-01 | 96.7% | 60.8% |
| 2vf9A00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.55 | 47.0 | 3.70e-01 | 96.7% | 48.1% |
| 3e99A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 45.0 | 3.52e-01 | 100.0% | 40.5% |
| 1ffvB04 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.53 | 43.0 | 3.18e-01 | 100.0% | 75.3% |
| 2bc4A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 42.0 | 3.50e-01 | 90.2% | 66.1% |
| 1b7yB05 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.52 | 37.0 | 2.74e-01 | 78.7% | 90.1% |
| 5ds1A00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 43.0 | 3.83e-01 | 96.7% | 79.3% |
| 3d2uA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 42.0 | 3.74e-01 | 95.1% | 100.0% |
| 4dduA07 | 2.60.510.20 | Mainly Beta › Sandwich › EV matrix protein fold › | 0.50 | 36.0 | 3.04e-01 | 82.0% | 43.0% |
ECOD (89)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5037955 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.86 | 78.0 | 4.74e-01 | 100.0% | 17.6% |
| 5069722 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.85 | 79.0 | 4.80e-01 | 100.0% | 26.4% |
| 4947601 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.84 | 78.0 | 4.85e-01 | 100.0% | 20.3% |
| 4931020 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.84 | 77.0 | 4.70e-01 | 100.0% | 17.4% |
| 5080098 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.84 | 77.0 | 4.74e-01 | 100.0% | 30.0% |
| 5083090 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.82 | 74.0 | 4.61e-01 | 100.0% | 29.7% |
| 5032376 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.81 | 64.0 | 4.07e-01 | 100.0% | 18.6% |
| 3602292 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.80 | 57.0 | 4.87e-01 | 100.0% | 48.4% |
| 4956937 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.80 | 57.0 | 3.49e-01 | 85.2% | 13.5% |
| 4513489 | 5084.5.2.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB | 0.76 | 63.0 | 3.82e-01 | 88.5% | 18.1% |
| 3789272 | 222.1.1.20 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MFE-2_hydrat-2_N | 0.76 | 56.0 | 4.17e-01 | 88.5% | 32.0% |
| 3716267 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.76 | 63.0 | 3.86e-01 | 88.5% | 21.0% |
| 4416793 | 5084.5.2.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB | 0.75 | 61.0 | 3.67e-01 | 88.5% | 18.8% |
| 5063899 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.75 | 70.0 | 4.60e-01 | 100.0% | 30.0% |
| 4927205 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.74 | 67.0 | 4.24e-01 | 100.0% | 23.1% |
| 4950971 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.72 | 65.0 | 4.01e-01 | 100.0% | 23.0% |
| 3387730 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.72 | 63.0 | 4.77e-01 | 98.4% | 43.0% |
| 3998766 | 3775.1.1.1 ↗ | beta barrels › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › CD36 | 0.72 | 63.0 | 3.85e-01 | 100.0% | 36.3% |
| 4941514 | 11.1.5.59 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF4139 | 0.71 | 56.0 | 4.76e-01 | 83.6% | 94.7% |
| 5033003 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.70 | 64.0 | 4.73e-01 | 100.0% | 56.6% |
| 5022921 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 56.0 | 4.68e-01 | 88.5% | 66.7% |
| 4966376 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.69 | 61.0 | 3.83e-01 | 100.0% | 26.1% |
| 167636 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.69 | 62.0 | 4.74e-01 | 100.0% | 46.3% |
| 5076453 | 243.1.1.10 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL | 0.68 | 56.0 | 4.55e-01 | 96.7% | 47.8% |
| 4037556 | 504.1.1.1 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › SecB | 0.68 | 55.0 | 4.19e-01 | 100.0% | 38.6% |
| 1005586 | 11.1.5.54 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PsaS | 0.68 | 55.0 | 4.23e-01 | 90.2% | 71.1% |
| 361002 | 243.1.1.25 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 | 0.68 | 53.0 | 4.13e-01 | 98.4% | 39.8% |
| 1555740 | 5.1.12.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › PERK and Ire1 luminal domains | 0.68 | 55.0 | 3.58e-01 | 86.9% | 39.5% |
| 5062002 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.68 | 60.0 | 3.84e-01 | 100.0% | 25.5% |
| 3200847 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.68 | 56.0 | 3.73e-01 | 88.5% | 26.8% |
| 4485619 | 11.1.1.102 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M_BRD | 0.67 | 51.0 | 4.36e-01 | 85.2% | 72.4% |
| 3326287 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.67 | 59.0 | 4.67e-01 | 100.0% | 49.2% |
| 3638561 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.67 | 53.0 | 4.20e-01 | 86.9% | 48.8% |
| 3173730 | 222.1.1.27 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PF27832 | 0.67 | 54.0 | 4.01e-01 | 88.5% | 34.8% |
| 5011661 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.67 | 49.0 | 3.55e-01 | 88.5% | 25.8% |
| 1556923 | 230.1.1.1 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › Uricase | 0.67 | 53.0 | 3.95e-01 | 88.5% | 66.7% |
| 3619988 | 922.1.1.1 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP_1 | 0.66 | 50.0 | 5.22e-01 | 86.9% | 94.5% |
| 3967063 | 5084.1.1.11 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Phenol_MetA_deg | 0.66 | 56.0 | 3.70e-01 | 100.0% | 23.0% |
| 3520621 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.65 | 56.0 | 3.58e-01 | 95.1% | 30.9% |
| 3808882 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.65 | 58.0 | 4.14e-01 | 100.0% | 38.3% |
| 3282685 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.65 | 52.0 | 4.14e-01 | 96.7% | 44.2% |
| 4959986 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 59.0 | 4.79e-01 | 100.0% | 77.1% |
| 4278326 | 7503.1.1.0 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain | 0.65 | 57.0 | 4.38e-01 | 100.0% | 44.4% |
| 5023116 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 51.0 | 4.40e-01 | 86.9% | 69.5% |
| 3796106 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.64 | 55.0 | 3.51e-01 | 96.7% | 28.9% |
| 5033004 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 57.0 | 4.58e-01 | 100.0% | 69.2% |
| 5030672 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.64 | 56.0 | 3.68e-01 | 100.0% | 28.3% |
| 3391818 | 3070.2.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain | 0.64 | 51.0 | 4.42e-01 | 91.8% | 55.6% |
| 3735831 | 9.1.1.37 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF6314 | 0.64 | 54.0 | 3.82e-01 | 98.4% | 37.5% |
| 5002012 | 2484.1.1.122 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF2209 | 0.63 | 48.0 | 3.72e-01 | 86.9% | 35.7% |
| 3574877 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.63 | 46.0 | 2.95e-01 | 98.4% | 15.5% |
| 4942841 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.63 | 55.0 | 4.44e-01 | 98.4% | 51.3% |
| 4945417 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 55.0 | 4.30e-01 | 100.0% | 71.9% |
| 4955214 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.62 | 55.0 | 3.45e-01 | 100.0% | 30.1% |
| 152806 | 243.1.1.26 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 | 0.62 | 54.0 | 4.07e-01 | 96.7% | 44.6% |
| 4946917 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.62 | 55.0 | 4.40e-01 | 100.0% | 80.8% |
| 3930135 | 922.1.1.0 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat | 0.62 | 47.0 | 4.77e-01 | 85.2% | 91.7% |
| 1918550 | 7503.1.1.4 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › LptE | 0.61 | 54.0 | 4.20e-01 | 100.0% | 47.1% |
| 4947414 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 53.0 | 4.29e-01 | 98.4% | 76.7% |
| 1883638 | 504.1.1.1 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › SecB | 0.61 | 53.0 | 3.99e-01 | 100.0% | 72.9% |
| 2658958 | 265.1.1.1 ↗ | a+b two layers › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › Levi_coat | 0.61 | 45.0 | 3.73e-01 | 93.4% | 41.3% |
| 3532044 | 11.1.1.640 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ZP-N | 0.60 | 49.0 | 4.11e-01 | 95.1% | 73.9% |
| 3921679 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 47.0 | 3.95e-01 | 86.9% | 72.7% |
| 3213338 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.60 | 49.0 | 3.99e-01 | 100.0% | 65.9% |
| 3553322 | 5089.1.1.3 ↗ | beta complex topology › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Gasdermin | 0.60 | 46.0 | 3.08e-01 | 83.6% | 41.2% |
| 4878135 | 5084.5.3.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel | 0.59 | 48.0 | 2.85e-01 | 95.1% | 23.8% |
| 2884138 | 2004.1.1.442 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21 | 0.59 | 45.0 | 3.52e-01 | 88.5% | 75.0% |
| 4973090 | 330.2.1.0 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) | 0.59 | 48.0 | 4.15e-01 | 98.4% | 57.0% |
| 3970009 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.58 | 44.0 | 3.30e-01 | 98.4% | 30.2% |
| 3613043 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.58 | 50.0 | 3.35e-01 | 95.1% | 46.8% |
| 3896317 | 11.1.1.640 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ZP-N | 0.58 | 46.0 | 3.95e-01 | 88.5% | 80.0% |
| 3392707 | 3692.1.1.0 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain | 0.58 | 46.0 | 3.46e-01 | 88.5% | 39.4% |
| 4104949 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.58 | 43.0 | 3.69e-01 | 83.6% | 63.8% |
| 3406730 | 11.1.1.430 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TRAP-delta | 0.57 | 49.0 | 3.85e-01 | 100.0% | 50.7% |
| 5001074 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.57 | 50.0 | 3.11e-01 | 100.0% | 28.9% |
| 3466694 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.57 | 48.0 | 3.79e-01 | 98.4% | 74.3% |
| 3843944 | 243.5.1.7 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › AKAP28 | 0.57 | 45.0 | 3.67e-01 | 100.0% | 44.8% |
| 3866741 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 50.0 | 4.24e-01 | 98.4% | 71.0% |
| 3267804 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 44.0 | 3.76e-01 | 93.4% | 52.0% |
| 3189800 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.56 | 45.0 | 3.54e-01 | 93.4% | 43.4% |
| 3803010 | 5084.5.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 | 0.56 | 48.0 | 3.24e-01 | 98.4% | 26.3% |
| 1720136 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.56 | 41.0 | 4.28e-01 | 80.3% | 87.0% |
| 3930732 | 2004.1.1.442 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21 | 0.56 | 43.0 | 2.79e-01 | 88.5% | 33.2% |
| 3344144 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.54 | 48.0 | 4.34e-01 | 100.0% | 73.8% |
| 3591111 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 43.0 | 2.69e-01 | 100.0% | 24.3% |
| 3437239 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.53 | 44.0 | 2.78e-01 | 96.7% | 28.9% |
| 4376921 | 11.1.1.640 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ZP-N | 0.52 | 43.0 | 3.59e-01 | 98.4% | 69.2% |
| 3484305 | 922.1.1.0 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat | 0.51 | 41.0 | 4.12e-01 | 100.0% | 93.8% |
| 3635380 | 511.1.1.2 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › PF27034 | 0.50 | 43.0 | 3.21e-01 | 100.0% | 67.6% |
D2
medium
residues 1-60
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3euoA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.52 | 39.0 | 3.03e-01 | 86.7% | 73.9% |
| 3v7iA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.52 | 36.0 | 2.88e-01 | 76.7% | 72.8% |
| 2x49A04 | 3.40.50.12790 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › FHIPEP family, domain 4 | 0.50 | 34.0 | 3.00e-01 | 71.7% | 44.4% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4952623 | 3281.1.2.10 ↗ | alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit 8 (Nqo8)-related › NADHdeh_related | 0.64 | 33.0 | 2.26e-01 | 73.3% | 14.1% |
| 4408929 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.53 | 38.0 | 2.58e-01 | 78.3% | 84.9% |
| 3057819 | 101.1.15.1 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS | 0.52 | 36.0 | 3.28e-01 | 76.7% | 96.6% |
| 3321176 | 5051.1.1.6 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Aa_trans | 0.51 | 36.0 | 2.21e-01 | 76.7% | 15.9% |