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IMGVR_UViG_3300048006_000557-3300048006-Ga0494154_000306_517_2082
Arc-VirIMGVR_UViG_3300048006_000557-3300048006-Ga0494154_000306_517_2082
Identity
- Kingdom:
- archaea
Quality
76.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-107
D2
high
residues 121-194
Domain cluster:
representative
D3
high
residues 383-518
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2no4A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.64 | 36.0 | 4.69e-01 | 75.0% | 100.0% |
| 2i53A01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.61 | 47.0 | 4.62e-01 | 100.0% | 76.2% |
| 2w9zA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.61 | 48.0 | 4.86e-01 | 100.0% | 85.0% |
| 3cxbA03 | 1.10.1740.30 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Secreted effector protein SifA helical domain | 0.59 | 33.0 | 4.14e-01 | 70.6% | 91.4% |
| 2ffjA01 | 1.10.8.380 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 | 0.59 | 27.0 | 3.90e-01 | 72.1% | 100.0% |
| 1wmwB00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.59 | 52.0 | 3.99e-01 | 97.1% | 54.5% |
| 1tj7A01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.58 | 36.0 | 4.05e-01 | 76.5% | 80.0% |
| 4p17A02 | 1.10.8.270 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › putative rabgap domain of human tbc1 domain family member 14 like domains | 0.58 | 34.0 | 3.79e-01 | 94.1% | 71.8% |
| 2mqaA00 | 1.10.274.60 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain | 0.58 | 38.0 | 4.00e-01 | 83.1% | 72.0% |
| 1za0A00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.55 | 41.0 | 3.38e-01 | 76.5% | 95.5% |
| 7r8bB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 40.0 | 3.22e-01 | 98.5% | 37.4% |
| 3l9tA02 | 1.25.40.290 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat domains | 0.53 | 35.0 | 3.69e-01 | 97.1% | 74.6% |
| 2es9A00 | 1.20.1290.30 | Mainly Alpha › Up-down Bundle › AhpD-like › | 0.51 | 30.0 | 3.38e-01 | 80.1% | 76.0% |
| 6ncrB01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.51 | 43.0 | 3.60e-01 | 91.2% | 53.6% |
| 1xx7A00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.51 | 42.0 | 3.96e-01 | 91.2% | 95.3% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3431012 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.77 | 53.0 | 6.08e-01 | 94.1% | 95.0% |
| 3358229 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.73 | 52.0 | 5.68e-01 | 99.3% | 87.8% |
| 3828609 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.69 | 49.0 | 5.37e-01 | 96.3% | 90.9% |
| 3743165 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.69 | 53.0 | 5.48e-01 | 94.1% | 87.2% |
| 3747265 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.66 | 54.0 | 5.54e-01 | 92.6% | 90.0% |
| 4973798 | 180.1.1.1 ↗ | alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › PAP2 | 0.60 | 48.0 | 4.88e-01 | 89.7% | 86.7% |
| 3384774 | 101.1.10.21 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N,Cyclin_C | 0.60 | 55.0 | 4.39e-01 | 99.3% | 86.2% |
| 4945042 | 180.1.1.1 ↗ | alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › PAP2 | 0.59 | 50.0 | 4.58e-01 | 93.4% | 69.2% |
| 3646228 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.59 | 44.0 | 4.18e-01 | 100.0% | 66.3% |
| 4944631 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.59 | 46.0 | 4.95e-01 | 97.1% | 100.0% |
| 4979934 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.56 | 41.0 | 4.26e-01 | 80.9% | 80.8% |
| 4115682 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.55 | 38.0 | 4.09e-01 | 86.8% | 86.4% |
| 3742359 | 3361.1.1.1 ↗ | alpha bundles › C-terminal Pdr1-activating domain of J-protein Zuo1 › C-terminal Pdr1-activating domain of J-protein Zuo1 › C-terminal Pdr1-activating domain of J-protein Zuo1 › RAC_head | 0.52 | 32.0 | 3.73e-01 | 100.0% | 87.4% |
| 3953850 | 1075.5.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter | 0.52 | 36.0 | 3.27e-01 | 72.8% | 56.9% |
| 4971714 | 5051.1.1.10 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › AA_permease_2 | 0.51 | 43.0 | 3.08e-01 | 92.6% | 94.1% |
| 3598385 | 633.6.1.0 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like | 0.51 | 39.0 | 3.44e-01 | 82.4% | 86.2% |
| 3861204 | 103.4.1.2 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › TFIIS_M | 0.50 | 35.0 | 3.83e-01 | 93.4% | 88.2% |
| 4933576 | 5079.1.1.1 ↗ | alpha duplicates or obligate multimers › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › MgtE | 0.50 | 37.0 | 3.40e-01 | 77.2% | 90.8% |
| 3216092 | 3930.1.1.0 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase | 0.50 | 35.0 | 3.50e-01 | 72.1% | 95.9% |
D4
medium
residues 261-287_304-382
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6z4xA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.71 | 56.0 | 4.91e-01 | 100.0% | 57.4% |
| 1aisB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.71 | 58.0 | 5.98e-01 | 100.0% | 93.9% |
| 1jkwA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.70 | 60.0 | 5.00e-01 | 100.0% | 55.1% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.68 | 56.0 | 5.66e-01 | 100.0% | 91.3% |
| 1zp2A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.67 | 57.0 | 5.65e-01 | 100.0% | 86.6% |
| 1c9bA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.63 | 54.0 | 5.41e-01 | 100.0% | 94.3% |
| 1guxB00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.62 | 55.0 | 5.06e-01 | 100.0% | 79.4% |
| 1yt3A03 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.62 | 43.0 | 4.81e-01 | 92.5% | 93.9% |
| 5xs2B02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.62 | 55.0 | 5.17e-01 | 100.0% | 81.8% |
| 3ermB00 | 1.10.10.710 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PSPTO_1197 like | 0.58 | 30.0 | 3.79e-01 | 90.6% | 82.8% |
| 4dtdA02 | 1.10.3680.20 | Mainly Alpha › Orthogonal Bundle › TerB-like › Actin cross-linking domain | 0.55 | 39.0 | 3.63e-01 | 73.6% | 86.1% |
| 5c54G00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 47.0 | 3.44e-01 | 97.2% | 96.1% |
| 3fdqA01 | 1.20.120.1030 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Motility repressor MogR, DNA-binding domain | 0.54 | 42.0 | 4.03e-01 | 84.0% | 98.4% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4996071 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.74 | 56.0 | 6.05e-01 | 97.2% | 94.4% |
| 4947863 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.74 | 57.0 | 6.07e-01 | 100.0% | 95.6% |
| 5025139 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.73 | 57.0 | 6.04e-01 | 100.0% | 92.6% |
| 4994316 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.73 | 57.0 | 5.21e-01 | 100.0% | 62.9% |
| 4405476 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.73 | 59.0 | 4.74e-01 | 100.0% | 45.5% |
| 4970309 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.72 | 57.0 | 5.97e-01 | 99.1% | 93.7% |
| 3830022 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.72 | 57.0 | 5.63e-01 | 100.0% | 80.9% |
| 4273747 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.71 | 59.0 | 5.27e-01 | 100.0% | 64.0% |
| 4961655 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.70 | 54.0 | 5.73e-01 | 98.1% | 91.6% |
| 5067099 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.69 | 59.0 | 5.45e-01 | 100.0% | 72.6% |
| 4944102 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.69 | 54.0 | 5.75e-01 | 100.0% | 98.9% |
| 3890040 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.68 | 54.0 | 4.98e-01 | 100.0% | 65.0% |
| 5001160 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.68 | 58.0 | 5.43e-01 | 100.0% | 76.2% |
| 5042711 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.67 | 54.0 | 4.92e-01 | 100.0% | 64.1% |
| 3409435 | 101.1.10.22 ↗ | alpha arrays › HTH › HTH › Cyclin-like › ORC6 | 0.66 | 53.0 | 5.53e-01 | 100.0% | 95.8% |
| 3513473 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.66 | 55.0 | 4.91e-01 | 100.0% | 64.0% |
| 4025852 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.66 | 58.0 | 5.50e-01 | 95.3% | 88.8% |
| 3519127 | 4979.2.1.1 ↗ | alpha arrays › C-terminal domain of Hypothetical protein MPN330-like › XRN2-binding domain (XTBD) › XRN2-binding domain (XTBD) › XTBD | 0.66 | 41.0 | 4.67e-01 | 86.8% | 83.7% |
| 3716548 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.65 | 49.0 | 4.97e-01 | 99.1% | 81.0% |
| 3275812 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.64 | 53.0 | 5.17e-01 | 97.2% | 81.7% |
| 3615762 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.64 | 58.0 | 5.16e-01 | 100.0% | 78.7% |
| 3998777 | 101.1.10.4 ↗ | alpha arrays › HTH › HTH › Cyclin-like › RB_B | 0.63 | 57.0 | 5.02e-01 | 99.1% | 71.6% |
| 3226186 | 101.1.10.4 ↗ | alpha arrays › HTH › HTH › Cyclin-like › RB_B | 0.62 | 56.0 | 4.81e-01 | 100.0% | 81.2% |
| 3226591 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.62 | 39.0 | 3.56e-01 | 74.5% | 47.1% |
| 3367300 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.62 | 56.0 | 4.88e-01 | 100.0% | 95.0% |
| 3480799 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.61 | 55.0 | 5.11e-01 | 100.0% | 82.2% |
| 3410493 | 5054.1.1.1 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Lig_chan | 0.58 | 36.0 | 3.21e-01 | 74.5% | 43.3% |
| 3404252 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.53 | 35.0 | 3.10e-01 | 90.6% | 45.0% |
| 3180704 | 592.6.1.1 ↗ | alpha arrays › PWI domain-like › Pre-mRNA-splicing helicase BRR2 plug domain › Pre-mRNA-splicing helicase BRR2 plug domain › BRR2_plug | 0.52 | 39.0 | 3.89e-01 | 81.1% | 87.8% |
| 3793382 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.50 | 40.0 | 4.11e-01 | 98.1% | 92.0% |