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IMGVR_UViG_3300048114_000266-3300048114-Ga0494428_0000022_12601_12900

Arc-Vir

IMGVR_UViG_3300048114_000266-3300048114-Ga0494428_0000022_12601_12900

Identity

Kingdom:
archaea

Quality

73.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 36-97
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5eupA00 3.30.710.10 Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A 0.54 46.0 3.81e-01 100.0% 72.5%
4b9kE00 3.30.710.10 Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A 0.52 45.0 4.08e-01 98.4% 98.8%
4uyiA00 3.30.710.10 Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A 0.52 44.0 3.59e-01 100.0% 73.2%
1wevA01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.50 42.0 4.20e-01 98.4% 92.2%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5074886 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.68 47.0 4.54e-01 96.8% 64.3%
5031333 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.65 45.0 5.07e-01 96.8% 100.0%
3514894 386.1.1.337 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › CCDC174_GRSR 0.65 33.0 4.06e-01 90.3% 96.7%
3326708 226.1.1.3 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › Skp1,Skp1_POZ 0.56 49.0 3.77e-01 100.0% 74.5%
3677941 226.1.1.2 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › Skp1 0.56 49.0 3.75e-01 100.0% 74.5%
3384790 226.1.1.3 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › Skp1,Skp1_POZ 0.56 49.0 3.76e-01 100.0% 74.5%
3596997 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.54 47.0 3.53e-01 100.0% 70.6%
3211943 226.1.1.3 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › Skp1,Skp1_POZ 0.54 47.0 3.60e-01 100.0% 75.3%
3409356 226.1.1.1 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.54 46.0 3.67e-01 100.0% 64.4%
4213973 7516.1.1.2 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.54 42.0 2.74e-01 88.7% 48.9%
3562933 198.1.1.4 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like › DUF3456 0.53 36.0 2.75e-01 71.0% 100.0%
3220120 226.1.1.2 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › Skp1 0.53 47.0 3.52e-01 100.0% 75.3%
3220832 592.7.1.1 ↗ alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain › GIPC1_GH2 0.53 45.0 4.06e-01 98.4% 97.8%
3679587 226.1.1.1 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.52 45.0 3.25e-01 100.0% 47.4%
3621807 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.52 44.0 3.90e-01 100.0% 91.6%
3174259 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.52 45.0 3.47e-01 100.0% 61.4%
3997829 226.1.1.1 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.52 43.0 3.47e-01 100.0% 60.0%
None — 0.52 43.0 3.52e-01 96.8% 81.5%
3406069 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.51 45.0 3.93e-01 100.0% 83.2%
3991484 226.1.1.5 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › Skp1_POZ 0.51 36.0 3.15e-01 75.8% 56.0%
4011983 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.51 43.0 3.46e-01 98.4% 73.8%
3704624 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.51 43.0 3.23e-01 100.0% 68.8%
3233037 226.1.1.1 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.50 43.0 3.70e-01 100.0% 85.7%