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IMGVR_UViG_3300048114_000266-3300048114-Ga0494428_0000022_23570_23974

Arc-Vir

IMGVR_UViG_3300048114_000266-3300048114-Ga0494428_0000022_23570_23974

Identity

Kingdom:
archaea

Quality

80.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 19-130
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1oo0A00 3.30.1560.10 Alpha Beta › 2-Layer Sandwich › Mago nashi protein › Mago nashi 0.56 37.0 3.42e-01 70.5% 52.1%
4ebgA00 3.10.450.560 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 40.0 4.28e-01 89.3% 97.9%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4156536 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.61 34.0 3.44e-01 78.6% 54.5%
4031599 101.1.2.584 ↗ alpha arrays › HTH › HTH › winged helix domain › HrcA 0.57 28.0 3.05e-01 71.4% 52.6%
4193896 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.56 27.0 2.97e-01 91.1% 54.7%
3470076 861.1.1.0 ↗ a+b two layers › Mago nashi protein › Mago nashi protein › Mago nashi protein 0.55 37.0 3.41e-01 70.5% 53.6%
3266702 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 37.0 4.07e-01 88.4% 86.0%
4200272 218.1.1.0 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like 0.52 27.0 2.96e-01 70.5% 57.8%
3786015 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.51 38.0 2.35e-01 78.6% 48.2%
5039593 2003.1.5.26 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_28 0.51 37.0 2.63e-01 75.9% 72.3%
5027903 244.4.1.4 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › PF27537 0.51 24.0 2.66e-01 92.0% 54.4%