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IMGVR_UViG_3300048134_000195-3300048134-Ga0494481_0000039_4111_4794

Arc-Vir

IMGVR_UViG_3300048134_000195-3300048134-Ga0494481_0000039_4111_4794

Quality

65.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 85-159
PDB
Domain cluster: representative
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 49.0 5.73e-01 76.0% 98.1%
1m4zA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.67 54.0 3.97e-01 88.0% 79.1%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.67 48.0 4.88e-01 77.3% 76.0%
2lqkA00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.66 48.0 4.96e-01 78.7% 81.4%
1rl2A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 40.0 4.56e-01 76.0% 82.1%
5w17A01 2.40.128.110 Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like 0.66 46.0 3.66e-01 73.3% 78.7%
2n88A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 41.0 4.52e-01 73.3% 81.0%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 44.0 4.83e-01 77.3% 87.1%
3be3A00 2.30.30.320 Mainly Beta › Roll › SH3 type barrels. › DUF1653-like domain 0.64 56.0 5.63e-01 96.0% 93.4%
1vw4M01 2.30.30.790 Mainly Beta › Roll › SH3 type barrels. › 0.64 55.0 4.58e-01 96.0% 69.7%
2d9uA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.64 41.0 4.17e-01 73.3% 66.2%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 42.0 4.47e-01 76.0% 78.5%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 44.0 4.61e-01 76.0% 79.7%
1i1jB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 48.0 4.31e-01 82.7% 67.3%
2fgeA01 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.62 44.0 3.00e-01 73.3% 94.0%
3g1jA00 2.30.30.350 Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. 0.62 45.0 4.25e-01 77.3% 84.4%
1wgsA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 43.0 3.56e-01 76.0% 40.6%
2arhA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.61 43.0 3.36e-01 73.3% 49.4%
4iupB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 42.0 4.58e-01 76.0% 90.3%
7xpkA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.59 52.0 4.17e-01 97.3% 71.7%
3kksB00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.59 41.0 3.34e-01 74.7% 60.5%
4oelB00 2.40.50.170 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Cysteine proteinases. Chain C 0.58 43.0 4.44e-01 88.0% 84.1%
1fr3A00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.58 37.0 3.95e-01 84.0% 73.1%
1o5yA00 3.10.690.10 Alpha Beta › Roll › Bifunctional nuclease domain › Bifunctional nuclease domain 0.58 44.0 3.58e-01 82.7% 82.5%
4by6B00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.57 40.0 3.14e-01 73.3% 33.7%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 41.0 4.13e-01 76.0% 77.3%
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.57 41.0 3.76e-01 80.0% 55.8%
1epaA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 47.0 3.76e-01 94.7% 85.0%
1srqA01 3.30.1120.160 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.56 47.0 4.01e-01 100.0% 80.4%
3g7nB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.56 41.0 2.84e-01 78.7% 89.9%
4ld6A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 49.0 4.26e-01 100.0% 77.8%
4k15A00 2.60.40.3860 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 37.0 3.12e-01 72.0% 63.0%
6u8yK01 3.30.460.80 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit 0.54 39.0 3.18e-01 78.7% 46.8%
2xlpB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 39.0 2.62e-01 81.3% 50.4%
3obyA01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.53 38.0 3.42e-01 78.7% 53.2%
2k4vA00 3.30.160.370 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 0.52 37.0 3.25e-01 77.3% 69.6%
5fgoA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 34.0 3.65e-01 72.0% 82.3%
7vljA01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.51 35.0 3.30e-01 72.0% 97.8%
4hadB02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.51 40.0 3.06e-01 88.0% 77.4%
2pmaA01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.51 40.0 3.49e-01 88.0% 79.3%
1u7bA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.51 37.0 2.60e-01 78.7% 83.3%
2k75A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 41.0 3.74e-01 92.0% 98.1%
ECOD (69)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3987601 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.87 56.0 6.68e-01 72.0% 98.0%
3935469 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.74 52.0 5.41e-01 76.0% 78.6%
4615629 4.1.1.449 beta barrels › SH3 › SH3 › SH3 › DUF1292 0.74 51.0 4.94e-01 72.0% 75.3%
3932647 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.74 56.0 5.37e-01 80.0% 71.8%
3408588 4.1.1.243 beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa 0.71 47.0 4.88e-01 76.0% 72.9%
4851967 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.71 51.0 5.58e-01 78.7% 91.9%
4519674 4.1.1.186 beta barrels › SH3 › SH3 › SH3 › DUF5397 0.71 48.0 5.33e-01 77.3% 91.4%
4123449 4.8.1.35 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF1292 0.68 46.0 4.49e-01 70.7% 72.9%
4306285 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 49.0 5.04e-01 89.3% 80.0%
3612090 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 47.0 5.11e-01 78.7% 90.0%
3921288 2484.1.1.114 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Med13_C 0.67 47.0 3.00e-01 73.3% 63.7%
3598499 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 45.0 3.65e-01 76.0% 37.1%
3923839 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 46.0 4.76e-01 70.7% 88.6%
3739064 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 49.0 5.24e-01 77.3% 89.2%
3784770 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.66 49.0 4.95e-01 78.7% 92.0%
3497856 2484.1.1.114 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Med13_C 0.66 46.0 3.61e-01 73.3% 74.1%
3517415 4.1.1.287 beta barrels › SH3 › SH3 › SH3 › DUF5641 0.66 47.0 4.94e-01 82.7% 87.7%
3821751 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.65 52.0 5.12e-01 97.3% 81.2%
4069543 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.64 47.0 4.73e-01 82.7% 77.3%
3393358 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.64 49.0 4.54e-01 97.3% 65.3%
3249764 2484.1.1.114 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Med13_C 0.64 43.0 3.09e-01 70.7% 81.3%
3967986 4.7.1.2 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › ROF 0.63 48.0 4.69e-01 80.0% 83.7%
3167531 4.1.1.17 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.63 54.0 4.49e-01 96.0% 68.1%
3798917 2.1.1.2 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.63 41.0 4.60e-01 76.0% 85.0%
3615426 4.11.1.1 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.62 45.0 3.64e-01 78.7% 43.3%
3786396 4.1.1.17 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.62 53.0 4.46e-01 96.0% 68.5%
3645842 4.1.1.162 beta barrels › SH3 › SH3 › SH3 › DUF502 0.62 53.0 5.24e-01 97.3% 90.0%
3978997 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.61 49.0 4.56e-01 88.0% 70.5%
4022865 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.61 43.0 3.09e-01 74.7% 84.1%
3942912 4.1.1.323 beta barrels › SH3 › SH3 › SH3 › WYL 0.61 49.0 4.72e-01 88.0% 78.8%
4928725 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.61 42.0 3.60e-01 70.7% 91.7%
4427477 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 48.0 4.49e-01 96.0% 68.4%
3626843 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.60 41.0 3.66e-01 70.7% 67.3%
3609256 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 46.0 4.40e-01 81.3% 75.3%
3719860 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 50.0 4.36e-01 92.0% 66.1%
3519122 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.60 47.0 4.46e-01 86.7% 76.7%
3940730 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 47.0 4.34e-01 96.0% 67.4%
3934278 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 49.0 4.24e-01 97.3% 59.1%
3283097 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.59 46.0 4.13e-01 86.7% 66.4%
4027701 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 40.0 3.64e-01 76.0% 53.0%
3720660 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 42.0 4.23e-01 76.0% 78.7%
3625974 284.1.3.4 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK 0.57 44.0 4.16e-01 81.3% 100.0%
3623084 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 47.0 4.02e-01 92.0% 54.4%
3617741 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 49.0 3.62e-01 97.3% 66.3%
4641867 277.1.1.0 a+b two layers › PX domain › PX domain › PX domain 0.57 41.0 3.24e-01 76.0% 59.4%
3924619 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 46.0 3.93e-01 96.0% 55.0%
608 4.23.1.2 beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.57 41.0 3.76e-01 80.0% 55.8%
3593519 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.57 41.0 3.37e-01 80.0% 85.2%
591 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.57 41.0 4.14e-01 77.3% 77.6%
5051933 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 45.0 3.50e-01 88.0% 65.9%
3606532 2484.6.1.0 mixed a+b and a/b › Ribonuclease H-like › Periplasmic domain of ExbD/TolR › Periplasmic domain of ExbD/TolR 0.55 43.0 4.07e-01 85.3% 92.2%
4961329 2003.1.3.4 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Lys_Orn_oxgnase 0.55 43.0 2.91e-01 84.0% 63.7%
3901117 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.55 48.0 3.62e-01 96.0% 51.7%
4020042 2003.1.3.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain 0.55 41.0 2.89e-01 81.3% 56.0%
3659258 2003.1.2.30 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_3 0.55 42.0 3.42e-01 82.7% 95.0%
4413415 2003.1.2.28 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Lys_Orn_oxgnase 0.54 42.0 2.65e-01 84.0% 77.5%
5079381 2003.1.3.28 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › FAD_binding_3 0.54 40.0 2.81e-01 81.3% 58.5%
3710497 2003.1.2.6 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like,NAD_binding_8 0.54 42.0 2.55e-01 84.0% 66.2%
3820607 4.8.1.1 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.54 38.0 4.07e-01 74.7% 87.7%
3729284 2003.1.2.5 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like 0.54 42.0 2.81e-01 84.0% 44.8%
4930470 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.54 40.0 3.88e-01 80.0% 69.4%
3062973 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.54 39.0 2.54e-01 76.0% 48.8%
3408330 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 41.0 3.86e-01 93.3% 66.0%
3194179 2003.1.3.5 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › NAD_binding_8 0.53 40.0 2.84e-01 82.7% 53.7%
3595339 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.53 42.0 2.52e-01 84.0% 66.8%
3338126 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.53 41.0 2.91e-01 86.7% 42.7%
1270135 2003.1.2.5 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like 0.53 40.0 3.15e-01 82.7% 94.7%
4459163 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.53 39.0 3.31e-01 81.3% 47.2%
3692341 2003.1.2.5 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like 0.51 39.0 2.60e-01 84.0% 41.8%
D2 high residues 182-221
PDB
D3 medium residues 31-77
PDB