←Back to structures
IMGVR_UViG_3300048134_000198-3300048134-Ga0494481_0000050_17984_18316
Arc-VirIMGVR_UViG_3300048134_000198-3300048134-Ga0494481_0000050_17984_18316
Identity
- Kingdom:
- archaea
Quality
70.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-85
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2o35A00 | 1.10.3340.10 | Mainly Alpha › Orthogonal Bundle › SMc04008-like fold › SMc04008-like | 0.62 | 41.0 | 4.00e-01 | 98.6% | 62.0% |
| 7zb5E01 | 3.40.50.10810 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tandem AAA-ATPase domain | 0.59 | 47.0 | 3.22e-01 | 90.4% | 72.0% |
| 3dboB00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.53 | 47.0 | 3.96e-01 | 100.0% | 73.8% |
| 3tndA00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.53 | 47.0 | 3.89e-01 | 100.0% | 75.8% |
| 3zvkA00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.53 | 46.0 | 3.82e-01 | 98.6% | 75.4% |
| 1n5uA01 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.51 | 37.0 | 3.37e-01 | 78.1% | 74.8% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4955130 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.64 | 44.0 | 4.05e-01 | 76.7% | 55.9% |
| 3879373 | 621.1.1.1 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › GBP_C | 0.59 | 42.0 | 2.69e-01 | 75.3% | 74.1% |
| 3332625 | 101.1.2.498 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF25870 | 0.53 | 42.0 | 3.82e-01 | 83.6% | 74.7% |
| 5045856 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.53 | 47.0 | 4.14e-01 | 97.3% | 69.5% |
| 4937830 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.52 | 47.0 | 3.95e-01 | 100.0% | 74.2% |
| 4937660 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.51 | 46.0 | 3.85e-01 | 97.3% | 76.7% |
| 4027782 | 621.1.1.0 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0.51 | 38.0 | 2.50e-01 | 82.2% | 27.6% |
| 4878224 | 108.1.1.18 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_2 | 0.50 | 43.0 | 3.55e-01 | 100.0% | 68.3% |