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IMGVR_UViG_3300048599_000489-3300048599-Ga0498940_0007732_14151_14507
Arc-VirIMGVR_UViG_3300048599_000489-3300048599-Ga0498940_0007732_14151_14507
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-102
Domain cluster:
rep: OM654374.1__UNY40132.1__KLEA5_gp13__00013__D12-107
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3qnmA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.64 | 41.0 | 4.32e-01 | 84.0% | 72.2% |
| 3fgxA00 | 3.30.2220.10 | Alpha Beta › 2-Layer Sandwich › rbstp2171 › rbstp2171 | 0.62 | 46.0 | 4.73e-01 | 99.0% | 81.2% |
| 2v6yA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.62 | 34.0 | 3.94e-01 | 81.0% | 73.3% |
| 2f02B00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.59 | 37.0 | 2.65e-01 | 73.0% | 20.1% |
| 2abqA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.56 | 36.0 | 2.62e-01 | 72.0% | 21.3% |
| 3dzvA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.54 | 40.0 | 2.99e-01 | 78.0% | 30.7% |
| 2f2cA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.54 | 37.0 | 3.64e-01 | 90.0% | 66.0% |
| 2o34A00 | 3.10.520.10 | Alpha Beta › Roll › T-fold › ApbE-like domains | 0.53 | 41.0 | 3.11e-01 | 84.0% | 91.2% |
| 2hsbA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.52 | 38.0 | 3.53e-01 | 77.0% | 89.7% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3691750 | 376.1.1.8 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box | 0.76 | 37.0 | 3.21e-01 | 74.0% | 32.2% |
| 5047179 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.64 | 43.0 | 3.10e-01 | 79.0% | 24.4% |
| 3727711 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.62 | 48.0 | 3.62e-01 | 83.0% | 85.2% |
| 3968270 | 3103.1.1.2 ↗ | alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Phage_TAC_13 | 0.62 | 52.0 | 5.09e-01 | 99.0% | 83.6% |
| 3539726 | 5054.1.1.76 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › XK-related | 0.58 | 43.0 | 3.02e-01 | 77.0% | 69.8% |
| 4938848 | 5069.1.3.131 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › DUF92 | 0.57 | 44.0 | 4.47e-01 | 83.0% | 92.0% |
| 3998700 | 3998.1.1.1 ↗ | alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 | 0.57 | 36.0 | 3.97e-01 | 71.0% | 80.0% |
| 3443843 | 109.4.1.1291 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif | 0.56 | 44.0 | 2.77e-01 | 86.0% | 65.1% |
| 3512183 | 131.1.1.15 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › Ppx-GppA_III | 0.55 | 43.0 | 4.13e-01 | 83.0% | 90.4% |
| 3990912 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 40.0 | 2.77e-01 | 76.0% | 29.2% |
| 3775073 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.53 | 42.0 | 3.05e-01 | 83.0% | 47.3% |
| 3924277 | 109.54.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 | 0.53 | 37.0 | 2.16e-01 | 72.0% | 13.9% |
| 3935958 | 212.1.1.34 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › EFL1 | 0.53 | 46.0 | 3.68e-01 | 100.0% | 92.1% |
| 3814043 | 101.1.10.21 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N,Cyclin_C | 0.53 | 47.0 | 3.48e-01 | 100.0% | 76.6% |
| 4025461 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.52 | 40.0 | 4.09e-01 | 81.0% | 86.3% |
| 5047677 | 230.4.1.2 ↗ | a+b two layers › T-fold › ApbE-like › ApbE-like › AbpE_bact | 0.51 | 38.0 | 3.66e-01 | 78.0% | 87.0% |
| 5079337 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.51 | 41.0 | 2.87e-01 | 86.0% | 53.2% |
| 4991722 | 3543.1.1.14 ↗ | alpha complex topology › Acid-activated urea channel › Acid-activated urea channel › Acid-activated urea channel › DUF981 | 0.51 | 39.0 | 3.18e-01 | 83.0% | 72.5% |
| 4927432 | 616.1.1.0 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain | 0.51 | 38.0 | 4.18e-01 | 92.0% | 100.0% |
| 3665260 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.51 | 38.0 | 3.03e-01 | 81.0% | 56.9% |
| 3500905 | 604.13.1.1 ↗ | alpha bundles › Spectrin repeat-like › USP8 N-terminal domain-like › USP8 N-terminal domain-like › USP8_dimer | 0.51 | 35.0 | 3.27e-01 | 87.0% | 56.8% |
| 3598156 | 230.4.1.0 ↗ | a+b two layers › T-fold › ApbE-like › ApbE-like | 0.51 | 35.0 | 2.88e-01 | 71.0% | 93.8% |
| 3969880 | 589.1.1.23 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › Rotamase | 0.50 | 39.0 | 2.95e-01 | 84.0% | 94.9% |
| 3997730 | 212.1.1.34 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › EFL1 | 0.50 | 43.0 | 3.48e-01 | 99.0% | 98.1% |