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IMGVR_UViG_3300048599_000489-3300048599-Ga0498940_0007732_1758_1973

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300048599_000489-3300048599-Ga0498940_0007732_1758_1973 ↗
Kingdom:: archaea

Quality

66.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-55

PDB

Domain cluster: representative

CATH (12)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4uz0A00	1.10.533.10	Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas	0.65	45.0	3.88e-01	79.2%	44.8%
2gfhA02	1.20.120.710	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain	0.62	52.0	4.47e-01	94.3%	64.0%
3f4sA02	1.10.40.80	Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 ›	0.62	46.0	4.40e-01	83.0%	78.1%
6z74C02	1.20.120.530	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like	0.59	47.0	3.57e-01	100.0%	56.0%
4zqeA03	1.10.1740.10	Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif	0.57	46.0	4.01e-01	100.0%	95.8%
7y11B01	1.10.8.20	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › N-terminal domain of phosphatidylinositol transfer protein sec14p	0.56	43.0	4.19e-01	94.3%	77.8%
3w0lD01	1.10.8.1080	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.55	43.0	3.51e-01	86.8%	71.3%
3bhgA01	1.10.275.10	Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain)	0.54	43.0	3.58e-01	100.0%	72.2%
3hx3A01	1.10.8.20	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › N-terminal domain of phosphatidylinositol transfer protein sec14p	0.54	43.0	4.08e-01	94.3%	88.1%
1iuqA01	1.10.1200.50	Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Glycerol-3-phosphate acyltransferase, alpha helical bundle, N-terminal	0.53	39.0	3.60e-01	83.0%	89.5%
2fnaA03	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.51	35.0	3.19e-01	71.7%	84.9%
1or7B01	1.10.1740.10	Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif	0.50	41.0	3.48e-01	94.3%	63.8%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3993015	103.1.1.0 ↗	alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain	0.66	47.0	4.97e-01	88.7%	88.9%
4993272	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.61	50.0	4.89e-01	96.2%	100.0%
4026426	103.1.1.0 ↗	alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain	0.61	47.0	4.79e-01	100.0%	92.0%
5082121	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.60	49.0	4.75e-01	94.3%	96.7%
5032891	130.1.1.0 ↗	alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif	0.58	41.0	3.80e-01	77.4%	64.3%
4938496	103.17.1.0 ↗	alpha arrays › RuvA-C › HMG-CoA reductase flap domain › HMG-CoA reductase flap domain	0.57	43.0	4.33e-01	94.3%	85.5%
3217253	103.1.1.0 ↗	alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain	0.57	44.0	4.25e-01	100.0%	76.9%
3456706	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.56	43.0	4.03e-01	98.1%	83.7%
4258320	142.1.1.3 ↗	alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2	0.56	42.0	3.80e-01	86.8%	68.8%