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IMGVR_UViG_3300048637_000150-3300048637-Ga0496633_0003266_6091_6315

Arc-Vir

IMGVR_UViG_3300048637_000150-3300048637-Ga0496633_0003266_6091_6315

Quality

83.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-62
PDB
Domain cluster: representative
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pmlX01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.77 54.0 4.12e-01 73.2% 83.9%
2zkmX01 2.30.29.240 Mainly Beta › Roll › PH-domain like › 0.77 58.0 3.91e-01 82.1% 47.1%
1pguA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.74 59.0 3.72e-01 87.5% 28.8%
8djfA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.73 58.0 3.66e-01 87.5% 32.7%
2qc5A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.71 60.0 3.76e-01 92.9% 26.8%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.70 55.0 4.37e-01 87.5% 43.3%
3d5pA00 3.40.1580.10 Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › SMI1/KNR4-like 0.70 57.0 4.39e-01 92.9% 43.6%
1w4tA01 3.30.2140.10 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase 0.70 49.0 3.39e-01 73.2% 24.2%
1q7fB00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.70 56.0 3.59e-01 91.1% 28.7%
4rs6A01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.69 56.0 4.44e-01 91.1% 62.7%
2p4oA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.69 58.0 3.63e-01 92.9% 30.8%
1npeA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.69 55.0 3.53e-01 87.5% 29.7%
3bwsA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.69 57.0 3.57e-01 92.9% 25.7%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.69 51.0 4.44e-01 80.4% 77.0%
4ci8A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.69 54.0 3.39e-01 87.5% 25.2%
4py5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.68 49.0 4.55e-01 76.8% 59.7%
1aisA02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.68 49.0 4.20e-01 75.0% 49.4%
5f7uA02 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.68 52.0 3.43e-01 82.1% 22.1%
3p34A02 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.68 52.0 4.35e-01 87.5% 47.4%
3vn5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.68 48.0 4.57e-01 76.8% 66.7%
4uopA01 3.30.1120.170 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.67 43.0 3.64e-01 76.8% 39.8%
4fr9A00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 55.0 4.16e-01 92.9% 87.9%
1iwmA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.67 51.0 3.66e-01 83.9% 44.1%
1qnaA01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.66 47.0 3.93e-01 75.0% 47.3%
1hlcA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.65 48.0 3.70e-01 80.4% 58.9%
4ld1A00 2.60.450.20 Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › 0.65 45.0 3.31e-01 73.2% 32.5%
1h4iA00 2.140.10.10 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Quinoprotein alcohol dehydrogenase-like superfamily 0.65 54.0 3.08e-01 94.6% 19.5%
2wjsA03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.64 47.0 3.42e-01 80.4% 42.2%
2xvlA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.64 52.0 3.51e-01 94.6% 70.9%
5x7qA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.64 51.0 3.49e-01 92.9% 68.1%
3go5A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 49.0 4.53e-01 83.9% 75.7%
4by2B00 2.60.450.20 Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › 0.63 44.0 3.24e-01 75.0% 34.2%
3hrpA02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.62 50.0 3.25e-01 96.4% 32.6%
1cb8A03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.61 45.0 3.69e-01 82.1% 77.3%
3a46A01 3.20.190.10 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal 0.60 54.0 4.02e-01 98.2% 80.1%
1ukfA00 3.90.70.20 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.60 52.0 3.64e-01 98.2% 75.5%
1tfkA00 3.10.450.200 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 45.0 3.96e-01 87.5% 59.6%
1rwhA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.60 48.0 3.89e-01 91.1% 78.1%
3v0aB03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 45.0 3.10e-01 83.9% 36.1%
6hoxA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 47.0 3.19e-01 92.9% 54.7%
1f1sA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.57 43.0 3.83e-01 82.1% 89.0%
6z46V01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.56 44.0 3.10e-01 87.5% 69.8%
2re3A02 2.30.270.10 Mainly Beta › Roll › duf1285 protein fold › duf1285 protein 0.54 41.0 3.82e-01 82.1% 100.0%
1g0hA01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.54 38.0 2.97e-01 76.8% 65.0%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 41.0 3.96e-01 87.5% 87.9%
1icwB00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 41.0 3.97e-01 87.5% 81.8%
4z32A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 37.0 3.18e-01 76.8% 43.8%
2vqrA01 3.40.720.10 Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A 0.53 39.0 2.42e-01 87.5% 78.8%
1s68A02 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.53 37.0 3.12e-01 78.6% 94.7%
1eigA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 39.0 3.60e-01 82.1% 72.6%
1f9qD00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 38.0 3.69e-01 82.1% 78.8%
1epwA03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 38.0 2.64e-01 87.5% 51.1%
3q7yA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.51 41.0 3.21e-01 91.1% 54.8%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5014724 295.1.1.51 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › FtsQ_DivIB_C 0.82 61.0 5.01e-01 83.9% 45.0%
3452886 145.1.1.60 alpha arrays › F-box domain › F-box domain › F-box domain › Beta-prop_KIB1-4 0.80 61.0 4.33e-01 80.4% 30.0%
4100064 5.1.3.192 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF5050 0.76 53.0 3.40e-01 75.0% 15.3%
3495285 331.18.1.4 a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B 0.75 52.0 3.80e-01 73.2% 34.0%
None 0.75 59.0 3.72e-01 85.7% 28.0%
4938262 3435.1.1.10 a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › PF27341 0.74 53.0 3.45e-01 75.0% 22.2%
4932458 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.73 53.0 3.31e-01 76.8% 16.3%
3841271 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.73 53.0 3.57e-01 83.9% 20.5%
4649120 206.1.2.4 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › Ins_P5_2-kin 0.73 60.0 3.79e-01 91.1% 87.4%
3987919 274.1.1.25 a+b two layers › Pili subunits › Pili subunits › Pili subunits › ComGF 0.73 53.0 4.17e-01 85.7% 39.1%
3765561 633.23.1.1 alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.72 50.0 3.27e-01 73.2% 19.6%
None 0.72 54.0 3.34e-01 80.4% 24.8%
4129145 5.1.3.23 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL 0.72 57.0 3.64e-01 87.5% 27.3%
3652003 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.72 64.0 3.92e-01 100.0% 37.9%
2985816 12.3.1.19 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 0.71 55.0 4.07e-01 83.9% 53.8%
3970026 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.70 57.0 3.53e-01 89.3% 29.4%
1677788 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.70 50.0 4.32e-01 78.6% 48.9%
3848155 633.23.1.1 alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.70 49.0 3.25e-01 73.2% 21.4%
3781083 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.69 57.0 3.34e-01 92.9% 25.3%
5028450 331.1.1.6 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF3378 0.69 49.0 4.57e-01 76.8% 60.0%
4142302 5.1.4.16 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A 0.69 54.0 3.37e-01 87.5% 26.9%
3879656 633.23.1.1 alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.69 47.0 3.25e-01 71.4% 24.9%
5052539 4294.1.1.0 few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like 0.68 49.0 4.48e-01 76.8% 64.0%
5038597 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.68 57.0 3.69e-01 94.6% 28.3%
5041229 375.13.1.0 few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain 0.68 50.0 4.98e-01 80.4% 100.0%
None 0.68 55.0 3.29e-01 87.5% 16.0%
4940155 3111.1.1.0 beta barrels › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain 0.68 51.0 4.45e-01 82.1% 76.5%
3267885 223.2.1.1 a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin 0.67 58.0 4.40e-01 98.2% 42.2%
3888075 633.23.1.1 alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.67 46.0 3.17e-01 73.2% 21.5%
4954483 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.67 55.0 4.28e-01 92.9% 55.2%
4029991 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.67 53.0 3.22e-01 89.3% 21.4%
3727614 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.66 58.0 3.76e-01 98.2% 43.8%
4865033 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.66 48.0 3.77e-01 85.7% 35.5%
5044321 12.3.1.19 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 0.66 54.0 3.59e-01 91.1% 66.4%
3273863 220.1.1.44 beta barrels › PH domain-like › PH domain-like › PH domain-like › POB3_N 0.65 51.0 4.20e-01 83.9% 72.0%
4014374 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.65 47.0 4.05e-01 75.0% 51.8%
3416297 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.64 48.0 3.98e-01 85.7% 92.7%
3717674 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.63 49.0 4.27e-01 87.5% 55.6%
2075069 206.1.2.4 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › Ins_P5_2-kin 0.63 54.0 3.23e-01 96.4% 94.2%
3992505 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.63 52.0 3.50e-01 100.0% 34.5%
5049640 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 43.0 3.85e-01 71.4% 63.3%
3057485 71.1.1.10 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_3 0.63 49.0 3.62e-01 87.5% 89.6%
1879626 5.1.4.38 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 0.62 54.0 3.61e-01 98.2% 85.8%
3403199 331.1.1.1 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP 0.62 50.0 3.95e-01 87.5% 81.8%
3623960 3105.1.1.4 a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › MOLO1 0.62 51.0 3.71e-01 94.6% 87.6%
3199320 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.62 46.0 3.64e-01 78.6% 91.3%
1146605 71.1.1.3 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB 0.61 48.0 3.42e-01 87.5% 64.6%
3254948 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.61 49.0 3.35e-01 91.1% 25.1%
2771922 12.2.1.1 beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain › Lyase_8_C 0.61 47.0 3.74e-01 87.5% 83.3%
4992060 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.60 47.0 3.37e-01 85.7% 88.6%
7384 219.1.1.21 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C58 0.60 52.0 3.64e-01 98.2% 75.5%
4110542 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.60 47.0 3.86e-01 87.5% 83.6%
3601907 5.1.1.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed 0.60 50.0 3.58e-01 98.2% 48.4%
3227253 331.9.1.8 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › AP3B1_C_2 0.60 41.0 3.53e-01 73.2% 97.9%
3475065 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.59 51.0 3.06e-01 100.0% 35.8%
3926345 6.1.1.1 beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › FGF 0.57 40.0 3.26e-01 76.8% 75.0%
4864839 10.1.1.25 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Toxin_R_bind_N 0.56 44.0 3.06e-01 89.3% 55.1%
3935058 292.2.1.5 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › Polo_box_3 0.56 46.0 4.10e-01 94.6% 74.1%
5023580 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 35.0 3.41e-01 73.2% 64.6%
4995814 2.7.1.1 beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V 0.50 41.0 3.11e-01 100.0% 36.9%