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IMGVR_UViG_3300048637_000150-3300048637-Ga0496633_0003266_7971_9014
Arc-VirIMGVR_UViG_3300048637_000150-3300048637-Ga0496633_0003266_7971_9014
Identity
- Kingdom:
- archaea
Quality
88.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 220-325
Domain cluster:
rep: SRR1747018_scaffold_2_1202_curated_prodigal-single.1__X__X__00319__D987-1069
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13180.13 best | PDZ_2 | 28.4 | 2.20e-06 | 96.2% | 63.7% |
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1y8tA03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.83 | 65.0 | 7.11e-01 | 100.0% | 97.7% |
| 4fgmA03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.83 | 62.0 | 6.36e-01 | 100.0% | 79.6% |
| 2hgaA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.82 | 52.0 | 5.83e-01 | 90.6% | 81.2% |
| 2p3wB01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.81 | 65.0 | 6.81e-01 | 100.0% | 92.7% |
| 5t69A02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.81 | 72.0 | 7.27e-01 | 100.0% | 95.3% |
| 1ky9B03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.80 | 66.0 | 7.01e-01 | 100.0% | 97.9% |
| 6ieoA03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.80 | 63.0 | 6.68e-01 | 100.0% | 92.6% |
| 4yo1A03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.80 | 67.0 | 7.10e-01 | 100.0% | 100.0% |
| 4jj0B00 | 2.30.42.60 | Mainly Beta › Roll › Pdz3 Domain › | 0.80 | 69.0 | 5.66e-01 | 100.0% | 53.9% |
| 5m3nA03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.79 | 69.0 | 7.17e-01 | 100.0% | 100.0% |
| 7xs0A01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.79 | 59.0 | 6.60e-01 | 91.5% | 100.0% |
| 7co7D03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.78 | 65.0 | 6.91e-01 | 100.0% | 100.0% |
| 3pv2A03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.77 | 61.0 | 6.68e-01 | 97.2% | 100.0% |
| 2zplB00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.76 | 54.0 | 5.78e-01 | 92.5% | 83.0% |
| 3qo6A03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.76 | 68.0 | 6.98e-01 | 100.0% | 98.0% |
| 6iccA02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.75 | 53.0 | 5.87e-01 | 92.5% | 89.5% |
| 4l8nA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.74 | 60.0 | 6.32e-01 | 100.0% | 95.7% |
| 1vaeA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.74 | 49.0 | 4.88e-01 | 88.7% | 64.9% |
| 1te0A03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.74 | 63.0 | 6.46e-01 | 100.0% | 95.0% |
| 1fc6A02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.73 | 58.0 | 6.18e-01 | 100.0% | 96.7% |
| 7w6zA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.73 | 51.0 | 5.41e-01 | 90.6% | 80.9% |
| 2i6vA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.72 | 57.0 | 6.20e-01 | 98.1% | 100.0% |
| 3wkmB01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.72 | 53.0 | 5.63e-01 | 93.4% | 86.2% |
| 1k32A04 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.72 | 59.0 | 6.24e-01 | 100.0% | 96.8% |
| 5f67B00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.71 | 49.0 | 5.14e-01 | 87.7% | 77.3% |
| 2kbsA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.70 | 47.0 | 5.06e-01 | 88.7% | 79.3% |
| 2kv8A00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.70 | 46.0 | 5.06e-01 | 88.7% | 84.3% |
| 2v90C00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.70 | 50.0 | 5.34e-01 | 88.7% | 84.9% |
| 2l97A01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.69 | 59.0 | 6.16e-01 | 99.1% | 99.0% |
| 1n99A01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.69 | 45.0 | 5.06e-01 | 87.7% | 86.6% |
| 3soeA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.69 | 51.0 | 5.27e-01 | 100.0% | 81.2% |
| 2eaqA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.69 | 48.0 | 5.18e-01 | 88.7% | 85.4% |
| 2dluA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.68 | 48.0 | 4.77e-01 | 89.6% | 69.4% |
| 2kjpA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.68 | 49.0 | 5.52e-01 | 94.3% | 98.7% |
| 6eziA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.68 | 47.0 | 5.14e-01 | 87.7% | 87.2% |
| 1mfgA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.67 | 49.0 | 5.19e-01 | 88.7% | 85.3% |
| 2eeiA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.67 | 48.0 | 4.83e-01 | 89.6% | 74.5% |
| 6sakC00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.64 | 50.0 | 5.24e-01 | 86.8% | 91.6% |
| 4ghnA02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.63 | 55.0 | 5.53e-01 | 100.0% | 93.3% |
| 1uhpA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.63 | 48.0 | 4.80e-01 | 89.6% | 78.5% |
| 5ovpA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.63 | 50.0 | 5.20e-01 | 88.7% | 91.7% |
| 3g1jA00 | 2.30.30.350 | Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. | 0.53 | 35.0 | 3.84e-01 | 100.0% | 80.0% |
| 4h8wC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 32.0 | 3.60e-01 | 97.2% | 81.3% |
| 3wirA03 | 2.60.420.10 | Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 | 0.52 | 24.0 | 2.87e-01 | 97.2% | 62.3% |
ECOD (89)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5054027 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.87 | 53.0 | 6.10e-01 | 90.6% | 81.2% |
| 3839715 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.85 | 62.0 | 6.95e-01 | 100.0% | 94.1% |
| 5000812 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.85 | 58.0 | 6.34e-01 | 89.6% | 82.2% |
| 3719137 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.85 | 64.0 | 7.18e-01 | 98.1% | 97.6% |
| 3387037 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.85 | 60.0 | 6.70e-01 | 100.0% | 91.8% |
| 5047157 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.84 | 70.0 | 7.41e-01 | 99.1% | 96.8% |
| 4237621 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.84 | 74.0 | 7.65e-01 | 98.1% | 97.0% |
| 5012619 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.84 | 57.0 | 6.23e-01 | 90.6% | 82.2% |
| 4542794 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.84 | 75.0 | 7.54e-01 | 100.0% | 95.2% |
| 4137635 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.84 | 76.0 | 7.73e-01 | 100.0% | 98.1% |
| 4986681 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.83 | 58.0 | 4.97e-01 | 90.6% | 48.4% |
| 5033889 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.83 | 71.0 | 7.35e-01 | 100.0% | 95.0% |
| 4933420 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.83 | 71.0 | 7.52e-01 | 100.0% | 100.0% |
| None | — | 0.83 | 63.0 | 6.86e-01 | 100.0% | 93.3% | |
| 5065268 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.83 | 70.0 | 7.27e-01 | 100.0% | 95.0% |
| 3839472 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.83 | 69.0 | 7.00e-01 | 100.0% | 88.6% |
| 5000198 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.82 | 70.0 | 7.38e-01 | 99.1% | 98.9% |
| 3956605 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.82 | 64.0 | 6.72e-01 | 100.0% | 89.5% |
| 3710124 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.82 | 61.0 | 6.65e-01 | 100.0% | 91.1% |
| 4986682 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.82 | 55.0 | 6.15e-01 | 90.6% | 85.9% |
| 4182137 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.82 | 75.0 | 7.42e-01 | 100.0% | 93.6% |
| 5054965 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.82 | 58.0 | 5.59e-01 | 88.7% | 65.0% |
| 4954125 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.81 | 53.0 | 5.73e-01 | 91.5% | 77.8% |
| 3945198 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.81 | 67.0 | 7.12e-01 | 98.1% | 96.8% |
| 4378590 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.81 | 69.0 | 6.94e-01 | 99.1% | 89.5% |
| 4530514 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.81 | 55.0 | 5.67e-01 | 94.3% | 73.0% |
| 4931081 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.81 | 57.0 | 5.33e-01 | 88.7% | 60.8% |
| 3386905 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.81 | 67.0 | 6.82e-01 | 100.0% | 88.6% |
| 3967009 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.81 | 69.0 | 6.82e-01 | 100.0% | 86.4% |
| 4955256 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.81 | 68.0 | 7.13e-01 | 100.0% | 98.9% |
| 3596413 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.80 | 61.0 | 6.57e-01 | 100.0% | 92.2% |
| 5004009 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.80 | 55.0 | 6.20e-01 | 70.8% | 88.2% |
| 3175976 | 7.1.1.12 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_1 | 0.80 | 68.0 | 6.50e-01 | 100.0% | 78.3% |
| 3704152 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.80 | 60.0 | 6.73e-01 | 98.1% | 98.8% |
| 4267258 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.80 | 66.0 | 6.96e-01 | 98.1% | 96.8% |
| 4406055 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.80 | 68.0 | 7.03e-01 | 100.0% | 95.0% |
| 3166282 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.80 | 61.0 | 6.69e-01 | 99.1% | 98.8% |
| 4154083 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.80 | 70.0 | 7.06e-01 | 100.0% | 94.3% |
| 3711754 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.80 | 64.0 | 6.28e-01 | 100.0% | 78.3% |
| 1562805 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.80 | 67.0 | 6.41e-01 | 100.0% | 77.9% |
| 3588917 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.79 | 72.0 | 7.26e-01 | 100.0% | 96.2% |
| 4949343 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.79 | 55.0 | 5.13e-01 | 86.8% | 58.5% |
| 4972857 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.79 | 57.0 | 5.15e-01 | 87.7% | 56.4% |
| 3744351 | 7.1.1.12 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_1 | 0.79 | 65.0 | 6.37e-01 | 99.1% | 80.0% |
| 5017398 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.79 | 55.0 | 5.97e-01 | 91.5% | 84.4% |
| 4969013 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.79 | 59.0 | 5.36e-01 | 87.7% | 60.7% |
| 4935017 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.78 | 54.0 | 5.09e-01 | 88.7% | 60.0% |
| 4645002 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.77 | 69.0 | 7.01e-01 | 100.0% | 96.2% |
| 5003947 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.77 | 55.0 | 4.83e-01 | 87.7% | 52.0% |
| 4199561 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.77 | 65.0 | 6.30e-01 | 100.0% | 80.9% |
| 4351213 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.77 | 61.0 | 6.45e-01 | 97.2% | 92.6% |
| 4194904 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.77 | 61.0 | 6.44e-01 | 97.2% | 92.6% |
| 5040657 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.77 | 59.0 | 4.90e-01 | 87.7% | 49.4% |
| 2728018 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.77 | 65.0 | 6.57e-01 | 100.0% | 91.3% |
| 5003948 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.77 | 57.0 | 5.64e-01 | 90.6% | 73.6% |
| None | — | 0.76 | 69.0 | 6.98e-01 | 100.0% | 95.2% | |
| None | — | 0.76 | 70.0 | 7.04e-01 | 100.0% | 96.2% | |
| 3947793 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.76 | 53.0 | 5.61e-01 | 92.5% | 80.0% |
| 5048194 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.76 | 53.0 | 5.45e-01 | 89.6% | 76.0% |
| 4245545 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.76 | 60.0 | 5.98e-01 | 97.2% | 80.9% |
| 4939746 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.76 | 72.0 | 7.11e-01 | 100.0% | 97.3% |
| 1308262 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.76 | 68.0 | 6.84e-01 | 100.0% | 93.5% |
| 4112294 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.75 | 62.0 | 6.47e-01 | 100.0% | 93.9% |
| 4958484 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.75 | 65.0 | 6.74e-01 | 100.0% | 96.0% |
| 3284184 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.75 | 62.0 | 6.58e-01 | 98.1% | 96.8% |
| 4988505 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.75 | 71.0 | 6.85e-01 | 100.0% | 93.2% |
| 4007876 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.75 | 59.0 | 6.13e-01 | 99.1% | 88.0% |
| 4950610 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.75 | 65.0 | 6.76e-01 | 100.0% | 97.0% |
| 4941236 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.74 | 50.0 | 5.56e-01 | 89.6% | 85.9% |
| 3306780 | 7.1.1.12 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_1 | 0.74 | 65.0 | 6.15e-01 | 99.1% | 79.2% |
| 4562453 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.74 | 52.0 | 5.40e-01 | 91.5% | 77.0% |
| 5073769 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.74 | 65.0 | 6.69e-01 | 100.0% | 97.0% |
| 3288609 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.74 | 55.0 | 5.53e-01 | 91.5% | 77.1% |
| 3953158 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.74 | 57.0 | 5.33e-01 | 84.0% | 66.2% |
| 4928428 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.73 | 67.0 | 6.73e-01 | 96.2% | 100.0% |
| 3313368 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.73 | 68.0 | 6.74e-01 | 100.0% | 96.4% |
| 3278361 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.72 | 55.0 | 5.79e-01 | 100.0% | 88.4% |
| 2774636 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.72 | 61.0 | 6.44e-01 | 97.2% | 100.0% |
| 4479761 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.72 | 58.0 | 5.99e-01 | 99.1% | 90.0% |
| 3744611 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.71 | 64.0 | 6.03e-01 | 100.0% | 81.6% |
| 4007430 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.71 | 55.0 | 5.95e-01 | 99.1% | 96.7% |
| 4584785 | 7.1.1.12 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_1 | 0.71 | 63.0 | 5.76e-01 | 100.0% | 74.8% |
| 4942082 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.70 | 54.0 | 5.82e-01 | 91.5% | 93.3% |
| 3738463 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.70 | 66.0 | 6.54e-01 | 100.0% | 96.4% |
| 136205 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.68 | 49.0 | 5.40e-01 | 94.3% | 94.0% |
| 184762 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.68 | 59.0 | 5.58e-01 | 100.0% | 78.0% |
| 4028484 | 7.1.1.7 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_3 | 0.68 | 62.0 | 5.55e-01 | 100.0% | 76.6% |
| 4962965 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.66 | 58.0 | 5.14e-01 | 93.4% | 85.3% |
| 3988186 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.64 | 56.0 | 5.29e-01 | 94.3% | 79.2% |
D2
medium
residues 15-140
Domain cluster:
rep: 3C__YP_009111405__torchivirus_A1__1578826__D3-94
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00089.33 best | Trypsin | 26.4 | 7.90e-06 | 90.5% | 40.9% |
| PF13365.13 | Trypsin_2 | 57.8 | 2.90e-15 | 77.0% | 70.3% |
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3otpA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.92 | 81.0 | 6.72e-01 | 100.0% | 57.1% |
| 4yo1A01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.90 | 59.0 | 7.10e-01 | 75.4% | 95.5% |
| 5y2dA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.88 | 60.0 | 6.20e-01 | 79.4% | 73.3% |
| 3nziA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.87 | 62.0 | 6.83e-01 | 75.4% | 86.8% |
| 3k6yA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.87 | 57.0 | 6.72e-01 | 75.4% | 91.3% |
| 5hmaA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.87 | 59.0 | 7.13e-01 | 74.6% | 100.0% |
| 4rqyA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.84 | 63.0 | 6.41e-01 | 79.4% | 78.9% |
| 4ri0A01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.84 | 78.0 | 6.56e-01 | 100.0% | 62.1% |
| 2z9iC01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.84 | 57.0 | 6.72e-01 | 74.6% | 95.7% |
| 1l1jA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.82 | 60.0 | 6.25e-01 | 75.4% | 94.1% |
| 4ic6C01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.79 | 58.0 | 6.24e-01 | 75.4% | 90.0% |
| 3fanA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.78 | 45.0 | 5.85e-01 | 72.2% | 100.0% |
| 1mbmA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.77 | 46.0 | 5.84e-01 | 74.6% | 100.0% |
| 1wxrA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.67 | 63.0 | 4.87e-01 | 100.0% | 57.6% |
| 4rt0A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.64 | 46.0 | 4.89e-01 | 73.0% | 89.9% |
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.60 | 43.0 | 4.50e-01 | 75.4% | 91.5% |
| 1ywuA00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.58 | 44.0 | 4.43e-01 | 79.4% | 96.0% |
| 1mvpA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.56 | 40.0 | 4.17e-01 | 72.2% | 96.4% |
| 4kktA01 | 2.40.420.20 | Mainly Beta › Beta Barrel › conserved putative lor/sdh protein from methanococcus maripaludis s2 fold › | 0.54 | 35.0 | 3.95e-01 | 92.9% | 85.4% |
| 1wzlA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 37.0 | 3.78e-01 | 73.0% | 86.8% |
| 4rdlA02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.51 | 35.0 | 3.80e-01 | 72.2% | 95.3% |
| 5z0uA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 39.0 | 4.00e-01 | 84.1% | 92.7% |
ECOD (55)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3448106 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.92 | 83.0 | 6.37e-01 | 100.0% | 47.2% |
| 5063379 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.91 | 80.0 | 6.95e-01 | 100.0% | 63.9% |
| 3950281 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.89 | 81.0 | 6.48e-01 | 100.0% | 52.9% |
| 3435448 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.89 | 85.0 | 6.66e-01 | 100.0% | 55.5% |
| 4338510 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.89 | 81.0 | 6.55e-01 | 100.0% | 55.3% |
| 3280955 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.89 | 82.0 | 6.53e-01 | 100.0% | 53.8% |
| 1308507 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.87 | 75.0 | 6.44e-01 | 100.0% | 60.4% |
| 4683578 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.87 | 84.0 | 6.67e-01 | 100.0% | 64.4% |
| 3284072 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.87 | 79.0 | 6.20e-01 | 100.0% | 49.8% |
| 4169622 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.87 | 82.0 | 6.57e-01 | 100.0% | 55.9% |
| 398505 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.87 | 82.0 | 6.54e-01 | 100.0% | 54.4% |
| 3532116 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.87 | 81.0 | 6.59e-01 | 100.0% | 57.2% |
| 3957702 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.86 | 78.0 | 7.61e-01 | 100.0% | 88.1% |
| 3659932 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.86 | 81.0 | 6.30e-01 | 100.0% | 59.6% |
| 4166426 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.86 | 82.0 | 6.21e-01 | 100.0% | 59.2% |
| 4028467 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.85 | 82.0 | 6.10e-01 | 100.0% | 47.3% |
| 3493511 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.84 | 80.0 | 6.35e-01 | 100.0% | 53.6% |
| 3649347 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.84 | 73.0 | 6.96e-01 | 90.5% | 89.7% |
| 3647453 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.84 | 80.0 | 6.14e-01 | 100.0% | 61.2% |
| 3843527 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.84 | 80.0 | 6.42e-01 | 100.0% | 57.3% |
| 3650249 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.83 | 80.0 | 6.19e-01 | 100.0% | 53.1% |
| 4221728 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.83 | 75.0 | 5.94e-01 | 100.0% | 51.3% |
| 3464880 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.83 | 80.0 | 6.46e-01 | 100.0% | 58.6% |
| 3468829 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.83 | 79.0 | 6.13e-01 | 100.0% | 56.9% |
| 3421481 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.83 | 79.0 | 5.97e-01 | 100.0% | 49.3% |
| 3816593 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.83 | 80.0 | 6.39e-01 | 100.0% | 58.2% |
| 4324118 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.83 | 79.0 | 6.18e-01 | 100.0% | 62.5% |
| 3443528 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.83 | 79.0 | 6.40e-01 | 100.0% | 62.3% |
| 3429729 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.82 | 78.0 | 6.56e-01 | 100.0% | 78.9% |
| 3437290 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.81 | 77.0 | 6.30e-01 | 100.0% | 61.4% |
| 3530898 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.81 | 77.0 | 5.74e-01 | 100.0% | 50.0% |
| 3672433 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.81 | 62.0 | 4.60e-01 | 79.4% | 37.2% |
| 3816110 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.81 | 78.0 | 6.18e-01 | 100.0% | 57.3% |
| 3969739 | 1.1.17.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › PF30586 | 0.80 | 76.0 | 5.98e-01 | 100.0% | 60.0% |
| 3417330 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.80 | 76.0 | 6.19e-01 | 100.0% | 60.5% |
| 4119987 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.80 | 75.0 | 6.07e-01 | 100.0% | 56.4% |
| 3420143 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.80 | 76.0 | 6.89e-01 | 100.0% | 80.6% |
| 3434538 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.79 | 75.0 | 6.13e-01 | 100.0% | 62.3% |
| 3816594 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.79 | 75.0 | 5.89e-01 | 100.0% | 57.1% |
| 3420315 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.79 | 75.0 | 6.28e-01 | 100.0% | 64.5% |
| 3727317 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.79 | 74.0 | 5.49e-01 | 100.0% | 57.5% |
| 3190386 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.79 | 75.0 | 5.91e-01 | 100.0% | 54.0% |
| 4089092 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.79 | 74.0 | 5.89e-01 | 100.0% | 54.0% |
| 3464866 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.79 | 74.0 | 6.96e-01 | 100.0% | 90.0% |
| 4015954 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.79 | 74.0 | 5.90e-01 | 100.0% | 54.0% |
| 3731870 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.78 | 73.0 | 5.27e-01 | 100.0% | 61.0% |
| 3428387 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.70 | 65.0 | 5.71e-01 | 100.0% | 69.4% |
| 3418960 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.65 | 47.0 | 4.02e-01 | 74.6% | 93.0% |
| 3801890 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.64 | 45.0 | 3.89e-01 | 72.2% | 90.5% |
| 3205875 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.52 | 41.0 | 4.02e-01 | 81.7% | 84.4% |
| 3208758 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.52 | 48.0 | 4.28e-01 | 100.0% | 88.0% |
| 5056666 | 1.1.7.34 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D4 | 0.52 | 41.0 | 4.11e-01 | 84.1% | 93.8% |
| 3286007 | 3844.2.1.1 ↗ | a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › ESX-1_EspG | 0.51 | 37.0 | 2.99e-01 | 73.8% | 74.9% |
| 3871253 | 220.1.1.122 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › C2_SHIP1-2_first | 0.51 | 29.0 | 2.86e-01 | 88.1% | 50.7% |
| 4565792 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.50 | 34.0 | 3.93e-01 | 92.1% | 97.8% |
D3
medium
residues 141-216
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00089.33 best | Trypsin | 31.7 | 2.00e-07 | 85.5% | 21.8% |
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3otpA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.89 | 84.0 | 5.94e-01 | 100.0% | 38.4% |
| 2rceA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.83 | 77.0 | 6.80e-01 | 100.0% | 70.8% |
| 1p3cA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.83 | 54.0 | 4.81e-01 | 81.6% | 48.6% |
| 5hmaA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.75 | 67.0 | 5.95e-01 | 96.1% | 70.2% |
| 1agjA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.75 | 50.0 | 4.11e-01 | 80.3% | 39.6% |
| 1azzA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.74 | 57.0 | 4.86e-01 | 81.6% | 57.1% |
| 2zgcA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.72 | 56.0 | 4.65e-01 | 81.6% | 58.7% |
| 5fcrA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.72 | 56.0 | 4.68e-01 | 81.6% | 57.4% |
| 2hlcA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.72 | 57.0 | 4.85e-01 | 86.8% | 59.5% |
| 1a1rA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.71 | 55.0 | 5.31e-01 | 90.8% | 74.1% |
| 5fahA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.70 | 57.0 | 4.87e-01 | 86.8% | 57.3% |
| 4b6eB01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.69 | 56.0 | 4.12e-01 | 98.7% | 33.7% |
| 3h7oB01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.68 | 51.0 | 4.43e-01 | 78.9% | 57.5% |
| 2qf4A01 | 2.40.10.340 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 1 | 0.66 | 44.0 | 4.39e-01 | 80.3% | 65.8% |
| 2eqnA01 | 2.40.10.230 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain | 0.60 | 43.0 | 4.21e-01 | 86.8% | 69.0% |
| 1qfjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.56 | 43.0 | 4.15e-01 | 85.5% | 72.5% |
| 4wkrA02 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.54 | 38.0 | 3.91e-01 | 75.0% | 84.7% |
| 2qrdE01 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.54 | 38.0 | 3.01e-01 | 77.6% | 52.2% |
| 1l3kA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.53 | 37.0 | 3.62e-01 | 72.4% | 70.2% |
| 3luyA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.52 | 43.0 | 3.88e-01 | 98.7% | 96.6% |
| 2m8hA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.52 | 36.0 | 3.39e-01 | 82.9% | 56.4% |
| 5uznA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.51 | 35.0 | 3.50e-01 | 73.7% | 68.8% |
| 2oo4A02 | 3.30.70.3310 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 38.0 | 3.45e-01 | 81.6% | 64.9% |
| 4tyzA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 35.0 | 3.22e-01 | 73.7% | 60.6% |
| 1x5oA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.51 | 34.0 | 3.37e-01 | 71.1% | 64.0% |
| 5zwnQ01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.50 | 34.0 | 3.42e-01 | 75.0% | 67.5% |
| 2dnnA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.50 | 34.0 | 3.35e-01 | 76.3% | 64.6% |
| 2rvjA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.50 | 35.0 | 3.29e-01 | 75.0% | 62.2% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4166426 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.91 | 85.0 | 5.64e-01 | 100.0% | 29.1% |
| 3647453 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.90 | 85.0 | 5.66e-01 | 100.0% | 31.2% |
| 3960279 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.90 | 84.0 | 6.61e-01 | 100.0% | 62.8% |
| 4441614 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.89 | 84.0 | 5.62e-01 | 100.0% | 30.6% |
| 3948218 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.89 | 84.0 | 5.67e-01 | 100.0% | 31.8% |
| 3468829 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.86 | 80.0 | 5.42e-01 | 100.0% | 32.3% |
| 4683578 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.85 | 77.0 | 5.33e-01 | 96.1% | 33.8% |
| 4173923 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.85 | 79.0 | 5.43e-01 | 100.0% | 35.7% |
| 3907927 | 1.1.5.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin | 0.84 | 73.0 | 7.00e-01 | 92.1% | 82.4% |
| 3883172 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.83 | 77.0 | 7.05e-01 | 98.7% | 78.9% |
| 4247805 | 1.1.5.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin | 0.82 | 67.0 | 4.75e-01 | 96.1% | 31.3% |
| 3950281 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.78 | 73.0 | 5.07e-01 | 100.0% | 37.8% |
| 4005257 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.78 | 68.0 | 4.69e-01 | 98.7% | 29.8% |
| 3415399 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.78 | 70.0 | 4.97e-01 | 100.0% | 34.4% |
| 3945667 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.78 | 68.0 | 4.64e-01 | 98.7% | 29.2% |
| 3305298 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.77 | 71.0 | 6.00e-01 | 100.0% | 80.8% |
| 3401816 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.75 | 66.0 | 4.56e-01 | 96.1% | 36.3% |
| 3401130 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.75 | 66.0 | 4.54e-01 | 96.1% | 36.7% |
| 3409561 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.75 | 65.0 | 4.56e-01 | 94.7% | 33.9% |
| 3939059 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.75 | 65.0 | 4.37e-01 | 96.1% | 29.5% |
| 2868330 | 1.1.5.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin | 0.75 | 64.0 | 4.45e-01 | 97.4% | 29.7% |
| 3394133 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.74 | 65.0 | 4.61e-01 | 96.1% | 36.9% |
| 4545500 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.74 | 65.0 | 4.53e-01 | 96.1% | 35.0% |
| 3403600 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.73 | 65.0 | 4.34e-01 | 98.7% | 31.7% |
| 3232599 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.72 | 64.0 | 4.36e-01 | 97.4% | 34.6% |
| 3397710 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.70 | 63.0 | 4.36e-01 | 98.7% | 36.7% |
| 3576746 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.70 | 61.0 | 4.57e-01 | 96.1% | 44.3% |
| 3663381 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.69 | 60.0 | 4.03e-01 | 97.4% | 24.9% |
| 3399264 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.69 | 60.0 | 4.17e-01 | 96.1% | 35.2% |
| 4053143 | 1.1.5.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S7 | 0.67 | 58.0 | 4.96e-01 | 94.7% | 81.7% |
| 3630080 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.67 | 60.0 | 3.93e-01 | 100.0% | 31.1% |
| 1173209 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.66 | 57.0 | 3.94e-01 | 96.1% | 34.4% |
| 3710481 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.64 | 45.0 | 4.31e-01 | 86.8% | 63.3% |
| 5059785 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.63 | 46.0 | 4.57e-01 | 88.2% | 75.0% |
| 3845835 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.62 | 44.0 | 3.97e-01 | 86.8% | 52.7% |
| 4913415 | 1.1.16.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain | 0.57 | 40.0 | 3.36e-01 | 72.4% | 56.1% |
| 134079 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.57 | 38.0 | 3.71e-01 | 76.3% | 60.9% |
| 3468397 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.56 | 34.0 | 2.93e-01 | 90.8% | 37.5% |
| 3744064 | 1.1.7.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › AARP2CN | 0.56 | 40.0 | 3.90e-01 | 86.8% | 66.7% |
| 4111045 | 243.1.1.64 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TcaA_2nd | 0.56 | 43.0 | 3.94e-01 | 85.5% | 93.3% |
| 3412143 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.54 | 39.0 | 3.44e-01 | 76.3% | 53.0% |
| 3269066 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.54 | 38.0 | 3.28e-01 | 73.7% | 48.0% |
| 3821074 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.54 | 37.0 | 3.04e-01 | 73.7% | 38.1% |
| 3586720 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.53 | 37.0 | 3.27e-01 | 75.0% | 48.3% |
| 3796292 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.52 | 36.0 | 3.25e-01 | 76.3% | 50.0% |
| 3528741 | 304.9.1.77 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28441 | 0.52 | 36.0 | 3.24e-01 | 75.0% | 53.0% |
| 3316408 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.51 | 35.0 | 3.30e-01 | 73.7% | 59.0% |
| 3948975 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.51 | 37.0 | 3.79e-01 | 89.5% | 81.3% |
| 2664577 | 1043.1.1.1 ↗ | beta complex topology › Beta domain of coronavirus spike glycoprotein › Beta domain of coronavirus spike glycoprotein › Beta domain of coronavirus spike glycoprotein › CoV_S1_C | 0.50 | 35.0 | 3.31e-01 | 80.3% | 58.2% |