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IMGVR_UViG_3300049639_000129-3300049639-Ga0499517_000799_3_1187
Arc-VirIMGVR_UViG_3300049639_000129-3300049639-Ga0499517_000799_3_1187
Identity
- Kingdom:
- archaea
Quality
73.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 32-114
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8fkmA01 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.65 | 46.0 | 3.76e-01 | 75.9% | 72.0% |
| 4q8gA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.65 | 57.0 | 3.81e-01 | 100.0% | 86.9% |
| 4s3nA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.60 | 45.0 | 3.78e-01 | 80.7% | 76.2% |
| 2bcqA03 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.60 | 47.0 | 4.19e-01 | 85.5% | 93.5% |
| 1o0uA01 | 3.40.1480.10 | Alpha Beta › 3-Layer(aba) Sandwich › glycerate kinase, domain 1 › MOFRL domain | 0.60 | 47.0 | 3.67e-01 | 86.7% | 69.5% |
| 2avwD01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.59 | 44.0 | 3.79e-01 | 81.9% | 63.1% |
| 2retA00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.58 | 43.0 | 4.36e-01 | 79.5% | 82.1% |
| 1yf9A00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.57 | 45.0 | 3.65e-01 | 85.5% | 98.7% |
| 2f4wB00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.56 | 43.0 | 3.67e-01 | 86.7% | 94.1% |
| 4ntqA00 | 3.10.380.20 | Alpha Beta › Roll › Ribonuclease domain of colicin e3 (Residues 456-551) › Novel toxin 21 (CdiA), C-terminal domain | 0.55 | 38.0 | 4.01e-01 | 73.5% | 80.3% |
| 2hv2A01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 40.0 | 3.82e-01 | 77.1% | 83.2% |
| 1cjxB02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.54 | 43.0 | 3.30e-01 | 88.0% | 86.1% |
| 2r1iA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 40.0 | 3.47e-01 | 79.5% | 66.2% |
| 1go4A00 | 3.30.900.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain | 0.54 | 42.0 | 3.23e-01 | 84.3% | 67.9% |
| 2hzmB00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.52 | 46.0 | 3.31e-01 | 95.2% | 56.8% |
| 1srqA01 | 3.30.1120.160 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.52 | 44.0 | 3.77e-01 | 94.0% | 64.5% |
| 2w4lB00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.52 | 39.0 | 3.20e-01 | 79.5% | 54.8% |
| 1zswA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 42.0 | 3.37e-01 | 91.6% | 71.9% |
| 3jamD02 | 3.30.1140.32 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain | 0.52 | 40.0 | 3.50e-01 | 85.5% | 69.2% |
| 2fwvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 37.0 | 2.89e-01 | 75.9% | 67.4% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 35.0 | 3.93e-01 | 71.1% | 93.7% |
| 3tdgA01 | 3.10.450.520 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 38.0 | 4.20e-01 | 92.8% | 100.0% |
| 1v2bB00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.50 | 39.0 | 3.36e-01 | 89.2% | 80.8% |
| 1qwdB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 37.0 | 3.02e-01 | 78.3% | 49.4% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5029261 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.79 | 74.0 | 5.92e-01 | 100.0% | 86.7% |
| 5013673 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.77 | 69.0 | 5.38e-01 | 100.0% | 73.3% |
| 4951884 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.75 | 68.0 | 5.19e-01 | 100.0% | 76.8% |
| 4941446 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.75 | 68.0 | 5.07e-01 | 100.0% | 70.5% |
| 4022477 | 219.1.1.111 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core, Rad4 | 0.73 | 66.0 | 4.58e-01 | 100.0% | 61.2% |
| 4980573 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.73 | 65.0 | 4.97e-01 | 98.8% | 65.3% |
| 4951834 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.71 | 63.0 | 4.68e-01 | 97.6% | 54.8% |
| 3742201 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.67 | 47.0 | 4.04e-01 | 73.5% | 55.6% |
| 3668551 | 2011.1.1.6 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 | 0.62 | 50.0 | 3.41e-01 | 88.0% | 52.0% |
| 3610425 | 316.1.1.23 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DNA_pol_B_thumb | 0.62 | 48.0 | 3.56e-01 | 85.5% | 57.0% |
| 3894328 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.61 | 44.0 | 3.40e-01 | 77.1% | 43.0% |
| 3983708 | 219.1.1.109 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Toxin_15 | 0.60 | 50.0 | 3.92e-01 | 95.2% | 93.3% |
| 3797449 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.60 | 44.0 | 2.70e-01 | 77.1% | 39.0% |
| 3270992 | 216.1.1.3 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UEV | 0.58 | 41.0 | 3.55e-01 | 74.7% | 51.4% |
| 4083442 | 2011.1.1.6 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 | 0.58 | 47.0 | 3.33e-01 | 89.2% | 56.7% |
| 3452408 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.58 | 42.0 | 2.85e-01 | 77.1% | 36.6% |
| 3830647 | 868.1.1.5 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med18 | 0.58 | 48.0 | 3.64e-01 | 90.4% | 57.4% |
| 3714578 | 9.15.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 › TLD | 0.57 | 45.0 | 3.34e-01 | 86.7% | 94.1% |
| 3714639 | 9.15.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 › TLD | 0.56 | 41.0 | 3.29e-01 | 79.5% | 97.3% |
| 3892200 | 71.2.1.4 ↗ | beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like › CATIP_N | 0.55 | 44.0 | 3.26e-01 | 90.4% | 40.4% |
| 3474589 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.55 | 45.0 | 3.61e-01 | 90.4% | 64.2% |
| 3948467 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.54 | 38.0 | 4.17e-01 | 73.5% | 95.4% |
| 3602665 | 832.1.1.1 ↗ | a+b three layers › N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 › N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 › N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 › eRF1_1 | 0.53 | 40.0 | 3.46e-01 | 83.1% | 77.9% |
| 4292289 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.53 | 37.0 | 4.07e-01 | 72.3% | 92.3% |
| 3744407 | 5.1.4.97 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rrn6_beta-prop | 0.53 | 37.0 | 2.40e-01 | 73.5% | 76.3% |
| 3183332 | 3385.1.1.0 ↗ | beta barrels › Allergen Alt a 1 › Allergen Alt a 1 › Allergen Alt a 1 | 0.53 | 37.0 | 3.20e-01 | 73.5% | 100.0% |
| 3950208 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.53 | 36.0 | 4.01e-01 | 71.1% | 92.3% |
| 3971209 | 274.1.1.4 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › T2SSI | 0.53 | 38.0 | 3.58e-01 | 79.5% | 67.3% |
| 4051625 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.52 | 36.0 | 3.95e-01 | 71.1% | 92.3% |
| 4010956 | 5.1.4.332 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF29748 | 0.52 | 40.0 | 2.64e-01 | 83.1% | 43.5% |
| 3256023 | 4026.1.1.0 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) | 0.52 | 46.0 | 3.93e-01 | 98.8% | 65.9% |
| 3031022 | 304.56.1.1 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › Cas_Cas2CT1978 | 0.51 | 34.0 | 3.32e-01 | 92.8% | 60.2% |
| 4970134 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 45.0 | 3.04e-01 | 100.0% | 49.4% |
D2
high
residues 168-373
Domain cluster:
rep: MN136198.2__QEM43051.1__AC4HA13_0076__00076__D266-456