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IMGVR_UViG_3300049640_000547-3300049640-Ga0499518_015743_1340_1738

Arc-Vir

IMGVR_UViG_3300049640_000547-3300049640-Ga0499518_015743_1340_1738

Quality

74.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 21-130
PDB
Domain cluster: representative
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1pbyA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.73 60.0 6.14e-01 100.0% 91.5%
3fyfA00 2.40.128.410 Mainly Beta › Beta Barrel › Lipocalin › 0.73 67.0 6.00e-01 100.0% 73.8%
1epaA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.72 64.0 5.64e-01 100.0% 66.3%
1jmxA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.69 58.0 5.84e-01 100.0% 90.8%
4q0yA00 2.60.40.4400 Mainly Beta › Sandwich › Immunoglobulin-like › 0.68 41.0 3.87e-01 81.8% 50.4%
2hzrA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.68 61.0 5.30e-01 100.0% 66.5%
3bxoA02 2.20.130.10 Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains 0.67 35.0 4.69e-01 99.1% 94.9%
3ebkB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.66 57.0 4.96e-01 100.0% 62.8%
4bboA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.65 58.0 5.78e-01 100.0% 92.9%
5ixgA00 2.40.128.110 Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like 0.65 59.0 5.08e-01 99.1% 98.8%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 37.0 4.57e-01 82.7% 89.9%
4azpA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.64 59.0 5.51e-01 100.0% 96.3%
6c1zA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.64 59.0 5.44e-01 100.0% 95.7%
1q47A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 46.0 3.02e-01 75.5% 49.4%
1o8vA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 58.0 5.44e-01 100.0% 98.5%
1vyfA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 58.0 5.42e-01 100.0% 96.3%
1uuzB00 3.40.1420.10 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme 0.63 54.0 5.08e-01 98.2% 77.3%
3v8uA03 2.40.128.240 Mainly Beta › Beta Barrel › Lipocalin › 0.63 45.0 4.83e-01 96.4% 90.0%
3fzxA00 2.40.360.20 Mainly Beta › Beta Barrel › YmcC-like fold › 0.63 55.0 4.50e-01 98.2% 98.6%
1vprA03 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 56.0 5.00e-01 100.0% 93.6%
1mdcA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 57.0 5.35e-01 100.0% 99.2%
1nqnA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.62 55.0 5.45e-01 100.0% 95.8%
3d9wA02 2.40.128.150 Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases 0.61 49.0 5.13e-01 99.1% 95.1%
2in5A00 2.40.360.10 Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like 0.60 52.0 4.36e-01 96.4% 73.3%
2pcsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 47.0 4.24e-01 86.4% 61.2%
1v2bB00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.59 51.0 4.60e-01 93.6% 80.8%
7vpjA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.59 50.0 4.27e-01 95.5% 100.0%
6xrbA01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.59 47.0 4.38e-01 86.4% 76.3%
1olzA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 47.0 3.06e-01 85.5% 90.5%
2ns9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 46.0 4.21e-01 89.1% 64.2%
3sy9C01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.58 51.0 3.56e-01 96.4% 95.8%
2d73A01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.57 53.0 3.86e-01 100.0% 95.1%
2i99A01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.57 47.0 4.30e-01 90.0% 76.0%
3hdjA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.57 47.0 4.33e-01 90.0% 69.3%
1tu1A00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.57 49.0 4.45e-01 91.8% 77.8%
3tfzB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 46.0 4.03e-01 89.1% 58.2%
2o62A01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 50.0 4.79e-01 100.0% 89.3%
3q5zA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 44.0 4.32e-01 100.0% 75.2%
3obaA05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.56 51.0 3.76e-01 100.0% 94.2%
1t17A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 46.0 4.21e-01 89.1% 66.2%
7cu8E01 3.40.1000.70 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain 0.56 47.0 4.07e-01 93.6% 95.1%
6f1uK02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.55 46.0 4.19e-01 100.0% 67.6%
6ka3A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 49.0 4.50e-01 100.0% 80.3%
5kkuD00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.55 40.0 3.03e-01 77.3% 88.7%
6v04A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 47.0 4.52e-01 100.0% 82.7%
3afcA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 44.0 2.89e-01 87.3% 89.0%
7ufsA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.54 50.0 3.72e-01 100.0% 82.4%
3mi6A01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.54 38.0 2.84e-01 74.5% 59.2%
3w9kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 42.0 4.00e-01 100.0% 71.1%
3pu2B00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 46.0 4.20e-01 100.0% 77.8%
3njtA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.53 46.0 3.44e-01 100.0% 92.4%
1ohfA03 2.60.270.70 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › 0.52 40.0 3.73e-01 81.8% 80.9%
4dokA01 3.50.70.10 Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › 0.52 49.0 4.30e-01 100.0% 84.5%
2bi0A01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 39.0 3.55e-01 80.9% 100.0%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3972703 9.1.1.17 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › MoaF 0.80 64.0 6.61e-01 100.0% 88.6%
1291144 9.1.1.27 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › MoaF_C 0.76 64.0 6.34e-01 100.0% 85.5%
357364 9.10.1.1 beta barrels › Lipocalins/Streptavidin › Uncharacterized protein bvu_3222 › Uncharacterized protein bvu_3222 › DUF4251 0.74 68.0 5.93e-01 100.0% 69.4%
3472947 9.1.1.53 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF7044 0.71 64.0 6.46e-01 100.0% 95.5%
3237402 5084.4.1.2 beta barrels › Outer membrane meander beta-barrels › Outer membrane phospholipase A (OMPLA) › Outer membrane phospholipase A (OMPLA) › DUF7042 0.70 65.0 5.89e-01 100.0% 78.6%
3585032 9.1.1.50 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF7042 0.68 63.0 5.93e-01 100.0% 89.2%
3364812 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.68 48.0 3.70e-01 94.5% 34.8%
5057645 9.2.1.0 beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin 0.68 56.0 5.53e-01 95.5% 85.2%
3279607 9.3.1.0 beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like 0.67 55.0 5.72e-01 100.0% 97.0%
5017958 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.66 61.0 5.44e-01 100.0% 79.3%
4936151 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.66 53.0 4.69e-01 86.4% 84.4%
5079230 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.66 44.0 4.54e-01 100.0% 71.4%
3249471 71.1.1.16 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Ependymin_amoebozoa 0.65 59.0 4.86e-01 100.0% 80.0%
3740523 331.3.1.6 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI 0.65 54.0 4.72e-01 89.1% 67.3%
4000635 331.3.1.6 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI 0.65 54.0 4.55e-01 89.1% 62.2%
4199183 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.64 59.0 5.34e-01 100.0% 97.9%
3265961 71.1.1.16 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Ependymin_amoebozoa 0.64 58.0 4.86e-01 100.0% 86.3%
4382398 222.1.1.0 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.64 45.0 4.10e-01 71.8% 95.0%
818 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.64 58.0 5.50e-01 100.0% 99.2%
3227579 331.3.1.6 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI 0.64 53.0 4.49e-01 89.1% 63.9%
3176080 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.64 47.0 3.06e-01 76.4% 32.3%
2320506 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.63 57.0 5.24e-01 99.1% 93.1%
5056195 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.63 44.0 3.10e-01 71.8% 37.3%
1779575 9.13.1.5 beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › AOC_like 0.63 56.0 4.79e-01 100.0% 90.1%
5033471 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.63 53.0 5.40e-01 100.0% 96.2%
5041783 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.63 57.0 4.64e-01 100.0% 76.1%
437290 9.2.1.1 beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › Avidin 0.63 55.0 5.12e-01 100.0% 76.8%
3270444 331.3.1.6 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI 0.63 52.0 4.40e-01 89.1% 66.7%
3931011 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.63 57.0 5.39e-01 100.0% 95.4%
4858377 9.13.1.5 beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › AOC_like 0.62 44.0 4.74e-01 74.5% 95.7%
3181589 331.3.1.6 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI 0.62 51.0 4.00e-01 89.1% 52.8%
3229636 331.3.1.6 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI 0.62 51.0 4.26e-01 88.2% 59.5%
3820010 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.61 50.0 4.47e-01 90.0% 83.7%
5028155 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.60 52.0 4.63e-01 93.6% 75.5%
3303563 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.60 51.0 4.47e-01 91.8% 85.0%
3395788 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.60 42.0 4.15e-01 71.8% 87.3%
3978775 4200.1.1.1 beta barrels › YmcC-like › YmcC-like › YmcC-like › YjbF 0.59 50.0 4.25e-01 96.4% 72.5%
3805100 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.58 50.0 4.16e-01 91.8% 67.0%
4962576 3692.1.1.1 a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall 0.58 48.0 4.43e-01 90.0% 77.2%
1710650 3692.1.1.0 a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain 0.58 47.0 4.90e-01 90.0% 95.1%
3736010 12.3.1.6 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N 0.58 53.0 3.75e-01 100.0% 92.8%
4999620 3692.1.1.1 a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall 0.58 50.0 4.70e-01 92.7% 79.2%
4983936 3692.1.1.1 a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall 0.58 48.0 4.49e-01 90.0% 80.0%
3269422 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.57 49.0 3.66e-01 91.8% 49.6%
3587744 9.9.1.1 beta barrels › Lipocalins/Streptavidin › Hypothetical protein YwiB › Hypothetical protein YwiB › DUF1934 0.57 50.0 4.68e-01 100.0% 98.6%
2141857 12.3.1.6 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N 0.57 52.0 3.80e-01 100.0% 93.9%
3181774 12.3.1.6 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N 0.56 51.0 3.62e-01 100.0% 90.3%
4571190 3692.1.1.1 a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall 0.56 46.0 4.31e-01 90.0% 78.4%
4964630 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.55 44.0 4.06e-01 89.1% 65.7%
5009564 12.3.1.3 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.54 50.0 3.74e-01 100.0% 99.2%
3282535 12.3.1.13 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C 0.54 50.0 3.75e-01 100.0% 83.5%
5047323 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.54 48.0 3.71e-01 100.0% 91.0%
5009761 331.3.1.7 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › COXG 0.51 45.0 4.18e-01 100.0% 76.6%