←Back to structures
IMGVR_UViG_3300049644_000389-3300049644-Ga0499522_014137_4050_4250
Arc-VirIMGVR_UViG_3300049644_000389-3300049644-Ga0499522_014137_4050_4250
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-63
Domain cluster:
representative
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2p84A02 | 2.30.30.290 | Mainly Beta › Roll › SH3 type barrels. › YopX-like domains | 0.72 | 56.0 | 5.26e-01 | 100.0% | 69.9% |
| 2dk3A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.72 | 64.0 | 5.67e-01 | 98.4% | 76.7% |
| 2l5qA01 | 2.30.30.730 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 49.0 | 5.26e-01 | 85.2% | 88.0% |
| 3j7aF03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 56.0 | 5.37e-01 | 90.2% | 73.2% |
| 2ldmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 53.0 | 5.61e-01 | 91.8% | 94.3% |
| 1tg0A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 58.0 | 5.65e-01 | 91.8% | 95.5% |
| 1irxA02 | 2.30.30.300 | Mainly Beta › Roll › SH3 type barrels. › class i lysyl-tRNA synthetase like | 0.68 | 46.0 | 5.17e-01 | 85.2% | 100.0% |
| 3oymA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 62.0 | 5.92e-01 | 100.0% | 97.1% |
| 2lg1A02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.68 | 54.0 | 4.42e-01 | 88.5% | 71.3% |
| 1t0hA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 50.0 | 4.32e-01 | 80.3% | 71.9% |
| 2egcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 52.0 | 4.87e-01 | 86.9% | 77.3% |
| 2yf0A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.65 | 51.0 | 4.62e-01 | 88.5% | 80.5% |
| 6c1zA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.65 | 53.0 | 4.16e-01 | 93.4% | 50.7% |
| 4azpA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.65 | 54.0 | 4.21e-01 | 93.4% | 64.2% |
| 6gbuD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.64 | 51.0 | 5.07e-01 | 86.9% | 93.8% |
| 1ybiA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.64 | 51.0 | 3.98e-01 | 91.8% | 93.7% |
| 3jb9F00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 52.0 | 4.77e-01 | 96.7% | 80.5% |
| 4q66D01 | 6.20.120.50 | Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.62 | 42.0 | 3.94e-01 | 73.8% | 58.9% |
| 1k90A02 | 3.90.1760.10 | Alpha Beta › Alpha-Beta Complex › Adenylylcyclase toxin fold › Anthrax toxin, edema factor, central domain | 0.62 | 46.0 | 3.50e-01 | 83.6% | 33.3% |
| 3rf9B02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.61 | 42.0 | 2.72e-01 | 72.1% | 27.6% |
| 1d3bB00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 50.0 | 4.64e-01 | 95.1% | 92.6% |
| 5je6A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 53.0 | 3.55e-01 | 100.0% | 40.3% |
| 4bj8K00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.59 | 48.0 | 4.00e-01 | 96.7% | 96.7% |
| 4bg7A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.58 | 40.0 | 3.43e-01 | 72.1% | 45.9% |
| 4m7dA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 47.0 | 4.69e-01 | 96.7% | 93.8% |
| 2p4oA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.58 | 49.0 | 3.18e-01 | 96.7% | 27.7% |
| 2czoA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.57 | 38.0 | 3.01e-01 | 70.5% | 72.3% |
| 2wssA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.56 | 50.0 | 4.37e-01 | 100.0% | 72.0% |
| 5dmhB02 | 3.40.980.20 | Alpha Beta › 3-Layer(aba) Sandwich › Molybdenum Cofactor Biosythetic Enzyme; Chain A › Four-carbon acid sugar kinase, nucleotide binding domain | 0.56 | 41.0 | 2.98e-01 | 78.7% | 92.8% |
| 3hfqA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 47.0 | 2.98e-01 | 95.1% | 22.9% |
| 1nqnA00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.56 | 44.0 | 3.78e-01 | 96.7% | 97.5% |
| 4at7B02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.56 | 44.0 | 3.23e-01 | 91.8% | 69.6% |
| 4qq1C03 | 2.40.128.240 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 39.0 | 3.56e-01 | 90.2% | 53.4% |
| 1eqtA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 38.0 | 3.75e-01 | 77.0% | 67.2% |
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.55 | 48.0 | 4.24e-01 | 100.0% | 72.2% |
| 4ggtB00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.55 | 43.0 | 3.81e-01 | 96.7% | 96.2% |
| 1nr4C00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 38.0 | 3.80e-01 | 77.0% | 71.2% |
| 1eotA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 38.0 | 3.64e-01 | 77.0% | 66.2% |
| 2qpvA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 44.0 | 3.57e-01 | 98.4% | 82.6% |
| 2ichA02 | 2.40.370.10 | Mainly Beta › Beta Barrel › AttH-like fold › AttH-like domain | 0.53 | 41.0 | 3.34e-01 | 90.2% | 91.5% |
| 1sqhA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 37.0 | 2.84e-01 | 80.3% | 71.7% |
| 2lojA01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.50 | 30.0 | 3.36e-01 | 83.6% | 87.2% |
| 3f6zB01 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.50 | 41.0 | 3.87e-01 | 96.7% | 93.7% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4024913 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.86 | 63.0 | 6.20e-01 | 95.1% | 72.3% |
| 3296864 | 4.1.1.236 ↗ | beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 | 0.80 | 62.0 | 6.28e-01 | 95.1% | 83.3% |
| 3621818 | 4.1.1.333 ↗ | beta barrels › SH3 › SH3 › SH3 › PF29330 | 0.80 | 59.0 | 6.41e-01 | 90.2% | 94.0% |
| 3256431 | 4.1.1.360 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 | 0.78 | 60.0 | 5.47e-01 | 93.4% | 62.5% |
| 4165723 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.78 | 60.0 | 5.95e-01 | 100.0% | 78.5% |
| 4009688 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.77 | 61.0 | 6.02e-01 | 100.0% | 80.0% |
| 5066141 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.75 | 62.0 | 6.06e-01 | 96.7% | 83.1% |
| 3502290 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 61.0 | 6.15e-01 | 96.7% | 88.3% |
| 4994895 | 4.15.1.2 ↗ | beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 | 0.74 | 66.0 | 6.04e-01 | 100.0% | 96.2% |
| 3623890 | 4.1.1.322 ↗ | beta barrels › SH3 › SH3 › SH3 › GPKOW_C | 0.74 | 63.0 | 5.59e-01 | 95.1% | 65.9% |
| 4995678 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 55.0 | 5.80e-01 | 88.5% | 90.9% |
| 3510676 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 61.0 | 5.16e-01 | 100.0% | 58.9% |
| 3999846 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.71 | 56.0 | 5.26e-01 | 85.2% | 78.7% |
| 3581631 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.71 | 56.0 | 5.54e-01 | 85.2% | 90.8% |
| 3544925 | 4.1.1.50 ↗ | beta barrels › SH3 › SH3 › SH3 › MIB_HERC2 | 0.71 | 63.0 | 5.16e-01 | 100.0% | 61.8% |
| 3978624 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.69 | 57.0 | 4.54e-01 | 100.0% | 44.6% |
| 3396594 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 59.0 | 5.96e-01 | 93.4% | 95.0% |
| 3890642 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 53.0 | 4.06e-01 | 85.2% | 85.7% |
| 4028731 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 61.0 | 6.04e-01 | 98.4% | 95.4% |
| 3549597 | 4.1.1.77 ↗ | beta barrels › SH3 › SH3 › SH3 › VGCC_beta4Aa_N | 0.68 | 53.0 | 4.21e-01 | 86.9% | 68.5% |
| 3787441 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.67 | 53.0 | 4.69e-01 | 86.9% | 66.7% |
| 3263031 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 57.0 | 5.64e-01 | 100.0% | 89.2% |
| 3609520 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.67 | 53.0 | 4.56e-01 | 86.9% | 86.3% |
| 3540139 | 220.1.1.79 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › TBC1D23_C | 0.66 | 53.0 | 4.23e-01 | 88.5% | 70.0% |
| 3623785 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.66 | 53.0 | 4.96e-01 | 88.5% | 81.3% |
| 3566631 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.66 | 52.0 | 4.77e-01 | 86.9% | 75.0% |
| 3592154 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.65 | 53.0 | 4.56e-01 | 88.5% | 85.3% |
| 4953129 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.65 | 46.0 | 3.79e-01 | 86.9% | 40.0% |
| 3261701 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.65 | 52.0 | 4.41e-01 | 90.2% | 76.2% |
| 3936442 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.64 | 51.0 | 4.33e-01 | 86.9% | 77.0% |
| 4044269 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.63 | 53.0 | 5.14e-01 | 96.7% | 82.9% |
| 3705541 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.62 | 49.0 | 4.25e-01 | 88.5% | 78.0% |
| 1676514 | 5.1.4.38 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 | 0.62 | 50.0 | 3.08e-01 | 88.5% | 39.2% |
| 3240511 | 4184.1.1.0 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat | 0.60 | 51.0 | 4.37e-01 | 100.0% | 89.5% |
| 3478706 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.58 | 44.0 | 3.50e-01 | 88.5% | 50.0% |
| 3238631 | 2484.1.1.190 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FBA_2 | 0.58 | 44.0 | 2.92e-01 | 95.1% | 19.2% |
| 3207947 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.58 | 47.0 | 2.85e-01 | 91.8% | 15.8% |
| 5017958 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.58 | 47.0 | 3.66e-01 | 95.1% | 66.0% |
| 2801583 | 9.2.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › Avidin | 0.58 | 46.0 | 3.89e-01 | 96.7% | 90.1% |
| 3595243 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 46.0 | 2.93e-01 | 90.2% | 19.1% |
| 3708732 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.57 | 47.0 | 3.01e-01 | 93.4% | 22.8% |
| 4426470 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 39.0 | 3.83e-01 | 75.4% | 92.9% |
| 143791 | 3844.1.1.1 ↗ | a+b two layers › hydrogenase expression protein-like › hydrogenase expression protein-like › hydrogenase expression protein › HupH_C | 0.55 | 40.0 | 3.30e-01 | 93.4% | 40.3% |
| 5019858 | 881.4.1.2 ↗ | a+b three layers › Mog1p/PsbP-like › C-terminal domain in sigma-E factor regulatory protein rseB › C-terminal domain in sigma-E factor regulatory protein rseB › DUF4367 | 0.55 | 41.0 | 3.32e-01 | 85.2% | 88.6% |
| 4977860 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.54 | 41.0 | 2.57e-01 | 88.5% | 91.5% |
| 4556083 | 9.2.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › Avidin | 0.54 | 45.0 | 3.63e-01 | 98.4% | 70.0% |
| 3445792 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.53 | 44.0 | 2.75e-01 | 96.7% | 86.6% |
| 5054384 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.53 | 42.0 | 4.05e-01 | 95.1% | 77.1% |
| 4988423 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.52 | 42.0 | 3.86e-01 | 88.5% | 70.0% |
| 3737835 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.52 | 42.0 | 3.67e-01 | 95.1% | 92.0% |
| 3411613 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 42.0 | 2.64e-01 | 96.7% | 30.1% |