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IMGVR_UViG_3300049646_000188-3300049646-Ga0499525_008597_2_241
Arc-VirIMGVR_UViG_3300049646_000188-3300049646-Ga0499525_008597_2_241
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-79
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05869.17 best | Dam | 63.6 | 2.60e-17 | 100.0% | 37.3% |
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7f8aA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.82 | 74.0 | 5.33e-01 | 100.0% | 58.1% |
| 5t5dA00 | 3.40.35.10 | Alpha Beta › 3-Layer(aba) Sandwich › Fructose Permease › Phosphotransferase system, sorbose subfamily IIB component | 0.69 | 58.0 | 4.56e-01 | 100.0% | 56.0% |
| 2qjwA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.66 | 45.0 | 3.34e-01 | 71.9% | 75.0% |
| 2vl7A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 54.0 | 4.11e-01 | 100.0% | 64.9% |
| 2hcmA01 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.64 | 55.0 | 4.28e-01 | 100.0% | 56.4% |
| 1dz3A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.64 | 47.0 | 3.95e-01 | 82.8% | 56.9% |
| 1yksA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 52.0 | 4.19e-01 | 100.0% | 67.4% |
| 4uuwA03 | 3.90.950.20 | Alpha Beta › Alpha-Beta Complex › Maf protein › CinA-like | 0.60 | 50.0 | 3.94e-01 | 98.4% | 81.0% |
| 7ncyB01 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.59 | 50.0 | 4.18e-01 | 100.0% | 67.8% |
| 4evsA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 48.0 | 3.72e-01 | 100.0% | 72.5% |
| 5fhgA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 48.0 | 3.60e-01 | 100.0% | 52.3% |
| 3gv0A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 46.0 | 3.83e-01 | 100.0% | 76.7% |
| 3qtgA03 | 3.40.1380.20 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain | 0.56 | 45.0 | 3.94e-01 | 100.0% | 85.2% |
| 3e0vB01 | 3.40.1380.20 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain | 0.55 | 46.0 | 3.60e-01 | 100.0% | 80.7% |
| 3kn3A02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.55 | 44.0 | 3.82e-01 | 100.0% | 74.6% |
| 3vnrA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.54 | 44.0 | 2.82e-01 | 100.0% | 19.8% |
| 7sglD01 | 3.40.50.12650 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 45.0 | 3.61e-01 | 100.0% | 51.1% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3945266 | 2003.1.5.103 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Dam | 0.92 | 87.0 | 6.25e-01 | 100.0% | 40.0% |
| 3945051 | 2003.1.5.103 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Dam | 0.88 | 80.0 | 5.81e-01 | 100.0% | 40.6% |
| 3689041 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.68 | 58.0 | 4.48e-01 | 100.0% | 67.1% |
| 2892266 | 2007.16.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavodoxin-like domain in outer capsid glycoprotein VP7 › Flavodoxin-like domain in outer capsid glycoprotein VP7 › VP7 | 0.64 | 49.0 | 4.15e-01 | 84.4% | 74.8% |
| 4606827 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.63 | 54.0 | 4.34e-01 | 100.0% | 54.8% |
| 4979042 | 2003.1.1.30 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ApbA | 0.63 | 45.0 | 3.34e-01 | 78.1% | 48.9% |
| 5075090 | 7515.1.1.6 ↗ | a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Phosphodiest | 0.62 | 51.0 | 3.52e-01 | 100.0% | 52.1% |
| 1117601 | 2004.1.1.144 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 | 0.61 | 45.0 | 3.77e-01 | 85.9% | 72.9% |
| 2884215 | 2005.1.1.10 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ETF | 0.60 | 49.0 | 3.64e-01 | 100.0% | 44.7% |
| 4438874 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.60 | 44.0 | 3.28e-01 | 82.8% | 46.6% |
| 4954734 | 7518.1.1.1 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C | 0.57 | 47.0 | 4.00e-01 | 100.0% | 92.5% |
| 4504218 | 2004.1.1.225 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MFD_D3 | 0.56 | 43.0 | 3.76e-01 | 85.9% | 80.0% |
| 4193546 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 42.0 | 3.61e-01 | 82.8% | 77.1% |
| 3552691 | 2005.1.1.10 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ETF | 0.54 | 44.0 | 3.30e-01 | 100.0% | 43.5% |
| 3969315 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.53 | 43.0 | 3.07e-01 | 100.0% | 30.6% |
| 3265126 | 2005.1.1.10 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ETF | 0.53 | 42.0 | 3.24e-01 | 100.0% | 68.2% |
| 4960616 | 7551.1.1.1 ↗ | a/b three-layered sandwiches › ComB-like › ComB-like › ComB-like › 2-ph_phosp | 0.53 | 43.0 | 3.12e-01 | 100.0% | 77.8% |
| 3589133 | 7523.1.1.25 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Phosphonate-bd | 0.52 | 41.0 | 3.48e-01 | 95.3% | 75.2% |