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IMGVR_UViG_3300049648_000234-3300049648-Ga0499528_014859_3990_4472

Arc-Vir

IMGVR_UViG_3300049648_000234-3300049648-Ga0499528_014859_3990_4472

Quality

86.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 51-158
PDB
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2l2oA00 1.10.10.1540 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain 0.71 53.0 5.86e-01 100.0% 97.6%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 49.0 4.97e-01 99.1% 74.3%
3bz6A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 46.0 5.23e-01 96.3% 93.6%
2mlgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 41.0 4.67e-01 91.7% 84.4%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 46.0 4.72e-01 97.2% 73.3%
5dymA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 46.0 4.89e-01 100.0% 81.2%
5h20A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 46.0 4.69e-01 100.0% 76.7%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 47.0 4.82e-01 100.0% 79.6%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 46.0 4.69e-01 100.0% 77.4%
3l9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 45.0 4.95e-01 100.0% 89.9%
2dqlA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 46.0 4.54e-01 100.0% 71.3%
2qbyA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 46.0 4.91e-01 98.1% 92.2%
1fbqA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 48.0 5.16e-01 93.5% 100.0%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 44.0 4.35e-01 100.0% 70.5%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 45.0 4.64e-01 100.0% 80.0%
6kf9G01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 41.0 4.59e-01 98.1% 90.2%
5deqB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 40.0 4.46e-01 96.3% 89.2%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 43.0 4.14e-01 99.1% 65.8%
7qssA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.60 41.0 3.44e-01 99.1% 40.4%
1fpqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 45.0 4.33e-01 100.0% 69.0%
5cemA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 34.0 3.96e-01 77.8% 82.2%
1bm9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 43.0 4.19e-01 100.0% 70.0%
1b24A01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.58 44.0 4.68e-01 97.2% 93.7%
1kyzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 43.0 4.42e-01 99.1% 83.5%
2eshA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 43.0 4.25e-01 100.0% 76.3%
5f9eA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 40.0 3.75e-01 80.6% 60.4%
5w2fA01 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.55 36.0 3.93e-01 72.2% 82.6%
2qmlA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.54 36.0 2.99e-01 100.0% 37.8%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.52 34.0 3.95e-01 96.3% 94.7%
2ltrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 36.0 3.72e-01 73.1% 100.0%
1repC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 40.0 4.29e-01 95.4% 98.9%
4ebrA00 3.30.1460.50 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.52 41.0 3.72e-01 88.0% 83.4%
2l48A00 3.30.70.2030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 27.0 2.97e-01 70.4% 60.0%
2lfvA00 3.30.70.1070 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat 0.51 30.0 3.06e-01 74.1% 57.5%
2y7jA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 38.0 4.10e-01 76.9% 92.2%
3rrkA03 3.30.70.2750 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 30.0 3.46e-01 70.4% 82.4%
ECOD (83)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5018482 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 64.0 6.67e-01 98.1% 100.0%
3463151 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 51.0 4.63e-01 99.1% 56.6%
5061514 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 47.0 3.91e-01 100.0% 39.5%
5029778 101.1.2.43 alpha arrays › HTH › HTH › winged helix domain › Pox_D5 0.67 48.0 5.20e-01 96.3% 88.9%
5001098 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 48.0 5.17e-01 100.0% 90.0%
2409292 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.66 47.0 4.80e-01 100.0% 76.9%
4964954 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.66 46.0 4.39e-01 100.0% 60.9%
4947948 101.1.2.876 alpha arrays › HTH › HTH › winged helix domain › tRNA-synt_2d 0.66 45.0 4.99e-01 98.1% 89.4%
5045747 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.66 45.0 4.84e-01 94.4% 84.4%
3941591 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 48.0 5.30e-01 99.1% 97.6%
3187043 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 51.0 5.56e-01 100.0% 100.0%
3672413 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 48.0 5.16e-01 88.0% 91.1%
5025840 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 49.0 5.10e-01 99.1% 86.0%
4966215 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 46.0 3.96e-01 99.1% 47.3%
5050784 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 49.0 5.27e-01 98.1% 94.4%
4981949 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 44.0 4.93e-01 96.3% 92.5%
4966185 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.65 45.0 4.83e-01 99.1% 82.1%
2056399 101.1.2.213 alpha arrays › HTH › HTH › winged helix domain › NrtR_WHD 0.65 40.0 4.70e-01 91.7% 89.5%
2391543 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.64 47.0 3.87e-01 100.0% 42.1%
4438513 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.64 44.0 4.38e-01 96.3% 68.2%
4585912 101.1.2.603 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9 0.64 44.0 3.01e-01 96.3% 20.3%
4944051 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 45.0 3.94e-01 100.0% 47.1%
4527101 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.64 43.0 3.81e-01 96.3% 46.9%
5013990 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 46.0 4.49e-01 100.0% 68.3%
5011468 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.64 44.0 4.22e-01 98.1% 61.6%
4994432 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 44.0 4.46e-01 98.1% 73.3%
5007541 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.63 41.0 4.23e-01 99.1% 68.6%
4012436 101.1.2.65 alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.63 50.0 5.30e-01 98.1% 96.8%
5003874 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.63 50.0 4.85e-01 98.1% 76.7%
3644266 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 47.0 4.90e-01 99.1% 86.0%
4965714 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.63 41.0 4.42e-01 99.1% 80.0%
4478999 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.62 42.0 3.63e-01 98.1% 43.4%
5035685 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.62 45.0 4.38e-01 100.0% 66.9%
5029277 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.62 42.0 4.30e-01 99.1% 71.4%
5036586 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 43.0 4.77e-01 98.1% 91.8%
5064203 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 44.0 4.78e-01 100.0% 90.0%
5045911 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 50.0 5.06e-01 99.1% 88.6%
149637 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.62 44.0 4.35e-01 100.0% 70.5%
5054122 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.62 42.0 3.69e-01 98.1% 46.9%
3647004 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.62 46.0 4.39e-01 100.0% 66.2%
4947503 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 45.0 3.95e-01 100.0% 51.2%
4959599 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.62 46.0 4.54e-01 100.0% 74.6%
4974744 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.61 40.0 3.46e-01 96.3% 41.1%
4941287 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.61 40.0 4.30e-01 96.3% 78.9%
2640815 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.61 41.0 4.26e-01 96.3% 72.5%
4561147 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.61 41.0 3.86e-01 96.3% 57.0%
5031648 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.61 41.0 3.56e-01 98.1% 44.8%
4970576 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.61 41.0 3.46e-01 96.3% 41.1%
3330019 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.61 46.0 4.56e-01 100.0% 75.7%
5042462 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.61 41.0 3.59e-01 98.1% 45.5%
4998580 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 41.0 4.41e-01 100.0% 83.3%
5027566 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 42.0 4.68e-01 100.0% 92.9%
4930596 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.60 40.0 3.51e-01 96.3% 43.5%
4978533 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.60 45.0 4.25e-01 100.0% 64.4%
5070883 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.60 41.0 4.44e-01 98.1% 84.4%
3604578 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.60 41.0 4.22e-01 96.3% 72.4%
5055444 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.60 40.0 4.17e-01 98.1% 73.0%
4467359 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.60 43.0 3.73e-01 98.1% 48.2%
4976807 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.60 40.0 3.89e-01 99.1% 60.0%
5075111 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.60 40.0 3.68e-01 98.1% 51.4%
4999546 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.59 45.0 4.71e-01 100.0% 90.5%
4466102 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.59 40.0 3.48e-01 96.3% 44.1%
4344487 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.59 40.0 3.48e-01 98.1% 44.8%
4507638 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.59 40.0 3.48e-01 98.1% 44.8%
4645846 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.59 40.0 3.46e-01 96.3% 44.1%
4985036 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.59 39.0 3.40e-01 96.3% 42.9%
4646072 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.59 40.0 3.45e-01 98.1% 43.5%
3281879 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.59 44.0 3.73e-01 99.1% 47.2%
3468397 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.59 52.0 5.01e-01 99.1% 86.7%
4998735 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 48.0 4.48e-01 100.0% 71.9%
4947925 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 40.0 3.51e-01 98.1% 46.6%
4014683 101.1.2.24 alpha arrays › HTH › HTH › winged helix domain › MAGE 0.58 49.0 4.60e-01 100.0% 75.4%
4401786 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.58 39.0 4.04e-01 97.2% 72.4%
3205132 101.1.2.533 alpha arrays › HTH › HTH › winged helix domain › WH_CYT4 0.57 38.0 4.06e-01 97.2% 78.9%
5048112 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 51.0 4.50e-01 100.0% 69.7%
4478358 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 49.0 5.00e-01 94.4% 99.0%
5052491 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.55 43.0 3.64e-01 99.1% 48.4%
3330041 101.1.2.303 alpha arrays › HTH › HTH › winged helix domain › RPC5 0.55 40.0 3.58e-01 100.0% 53.5%
3667109 101.1.2.111 alpha arrays › HTH › HTH › winged helix domain › RQC 0.55 46.0 4.45e-01 99.1% 80.0%
3521228 320.4.1.3 a+b two layers › R3H domain-like › PUB domain › PUB domain › PUB 0.53 44.0 4.13e-01 100.0% 73.3%
4221024 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 45.0 3.65e-01 96.3% 53.7%
5069995 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.51 40.0 3.19e-01 98.1% 40.9%
3718978 1.1.8.1 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 0.50 39.0 3.59e-01 80.6% 83.7%
D2 medium residues 1-50
PDB