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IMGVR_UViG_3300049699_000181-3300049699-Ga0499921_005816_1926_2051
Arc-VirIMGVR_UViG_3300049699_000181-3300049699-Ga0499921_005816_1926_2051
Identity
- Kingdom:
- archaea
Quality
89.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-42
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6nyyE01 | 1.20.58.760 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Peptidase M41 | 0.85 | 64.0 | 4.13e-01 | 78.6% | 19.7% |
| 2rrdA00 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.76 | 51.0 | 3.88e-01 | 71.4% | 29.7% |
| 1a6dA03 | 3.50.7.10 | Alpha Beta › 3-Layer(bba) Sandwich › GroEL › GroEL | 0.72 | 56.0 | 3.84e-01 | 90.5% | 24.2% |
| 4wzuA00 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.70 | 57.0 | 3.34e-01 | 92.9% | 53.9% |
| 1ntcA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.68 | 51.0 | 4.03e-01 | 83.3% | 46.2% |
| 1mqsA01 | 3.40.50.2060 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Sec1/Munc18 (SM) protein, domain 1 | 0.58 | 40.0 | 2.82e-01 | 73.8% | 72.1% |
| 2m4gA00 | 6.10.20.70 | Special › Helix non-globular › Arc Repressor Mutant, subunit A › | 0.57 | 42.0 | 3.57e-01 | 81.0% | 62.7% |
| 1whrA00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.56 | 46.0 | 3.33e-01 | 92.9% | 31.5% |
| 3mc6A01 | 6.10.250.3090 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.53 | 28.0 | 3.10e-01 | 85.7% | 53.1% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2589766 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.81 | 63.0 | 3.87e-01 | 83.3% | 15.7% |
| 4097142 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.76 | 60.0 | 3.44e-01 | 85.7% | 18.9% |
| 3670671 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.59 | 45.0 | 3.26e-01 | 88.1% | 25.5% |
| 3995195 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.54 | 46.0 | 2.57e-01 | 100.0% | 28.4% |