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IMGVR_UViG_3300049999_000606-3300049999-Ga0496611_000146_9871_10233

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300049999_000606-3300049999-Ga0496611_000146_9871_10233 ↗
Kingdom:: archaea

Quality

92.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-89

PDB

Domain cluster: representative

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1aw7A01	3.10.20.120	Alpha Beta › Roll › Ubiquitin-like (UB roll) ›	0.57	34.0	3.02e-01	75.3%	39.8%
3nkhA00	1.10.443.10	Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core	0.55	46.0	3.42e-01	91.8%	59.7%
5bviA00	2.60.200.10	Mainly Beta › Sandwich › Tumour Suppressor Smad4 ›	0.55	39.0	3.03e-01	72.9%	76.9%
1q9jB02	3.30.559.30	Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain	0.53	42.0	3.32e-01	87.1%	78.0%
4dwpA02	1.10.443.30	Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Telomere resolvase	0.53	43.0	3.16e-01	88.2%	70.5%
2byfA01	3.10.20.90	Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1	0.52	36.0	3.37e-01	71.8%	57.9%
1j6wA00	3.30.1360.80	Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › S-ribosylhomocysteinase (LuxS)	0.52	33.0	2.72e-01	91.8%	34.2%
6le1A01	3.30.70.330	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain	0.51	30.0	3.35e-01	92.9%	73.5%
4bwiB02	3.30.450.40	Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain	0.51	38.0	2.96e-01	78.8%	81.1%

ECOD (14)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5071984	223.2.1.0 ↗	a+b three layers › Profilin-like › profilin-like › profilin-like	0.68	41.0	3.50e-01	76.5%	36.4%
4932843	2008.1.1.59 ↗	a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1	0.66	59.0	4.24e-01	98.8%	34.3%
4961538	2002.1.1.256 ↗	a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MSH_C	0.62	55.0	3.51e-01	100.0%	30.9%
3455742	284.2.1.2 ↗	a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain › DUF8223	0.62	43.0	4.81e-01	82.4%	95.4%
3602838	101.1.8.0 ↗	alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes	0.58	39.0	3.40e-01	87.1%	42.1%
3611853	2484.1.1.1 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70	0.55	44.0	3.28e-01	89.4%	41.7%
3744519	101.1.2.535 ↗	alpha arrays › HTH › HTH › winged helix domain › PF25889	0.54	46.0	3.78e-01	95.3%	86.3%
3712216	324.1.1.1 ↗	a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC	0.54	34.0	3.37e-01	70.6%	60.0%
3642268	4955.1.1.0 ↗	a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	0.52	38.0	3.41e-01	83.5%	55.0%
3479163	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.52	40.0	3.53e-01	84.7%	79.2%
3982740	5086.1.1.190 ↗	alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › OEP	0.51	40.0	3.12e-01	91.8%	37.0%
3993325	101.1.2.12 ↗	alpha arrays › HTH › HTH › winged helix domain › DEP	0.51	44.0	3.66e-01	100.0%	81.2%
3629452	101.1.2.98 ↗	alpha arrays › HTH › HTH › winged helix domain › CDT1	0.50	40.0	3.18e-01	88.2%	54.6%
3579169	304.114.1.2 ↗	a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain › POL3_N	0.50	33.0	3.20e-01	91.8%	58.0%