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IMGVR_UViG_3300050006_000007-3300050006-Ga0496599_002695_18_248
Arc-VirIMGVR_UViG_3300050006_000007-3300050006-Ga0496599_002695_18_248
Identity
- Kingdom:
- archaea
Quality
79.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 44-73
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3sp1A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.57 | 40.0 | 2.45e-01 | 86.7% | 84.3% |
| 4xxbB00 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.54 | 37.0 | 3.67e-01 | 100.0% | 69.0% |
| 1xjuA00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.53 | 43.0 | 2.83e-01 | 100.0% | 24.4% |
| 1ep3B01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.52 | 39.0 | 2.93e-01 | 100.0% | 67.7% |
| 3m7nA03 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.50 | 34.0 | 3.47e-01 | 96.7% | 94.1% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4962274 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 48.0 | 4.49e-01 | 93.3% | 100.0% |
| 3349740 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 45.0 | 4.27e-01 | 100.0% | 97.8% |
| 3388521 | 375.1.1.219 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-C4H2 | 0.59 | 44.0 | 4.45e-01 | 100.0% | 93.3% |
| 4953421 | 375.2.1.0 ↗ | few secondary structure elements › Rubredoxin-like › YfgJ-like › YfgJ-like | 0.59 | 41.0 | 4.10e-01 | 96.7% | 100.0% |
| 3269360 | 375.4.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Nucleolar RNA-binding protein Nop10-like › Nucleolar RNA-binding protein Nop10-like | 0.57 | 38.0 | 3.88e-01 | 96.7% | 90.0% |
| 3189914 | 375.1.1.221 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf_Tbcl_Rhp7 | 0.54 | 38.0 | 3.81e-01 | 90.0% | 77.1% |
| 3296061 | 375.1.1.4 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-RanBP | 0.52 | 35.0 | 3.57e-01 | 100.0% | 100.0% |
| 3253025 | 375.4.1.6 ↗ | few secondary structure elements › Rubredoxin-like › Nucleolar RNA-binding protein Nop10-like › Nucleolar RNA-binding protein Nop10-like › Zn_Ribbon_1 | 0.51 | 35.0 | 3.59e-01 | 90.0% | 96.0% |