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IMGVR_UViG_3300050006_000007-3300050006-Ga0496599_002695_4591_4983
Arc-VirIMGVR_UViG_3300050006_000007-3300050006-Ga0496599_002695_4591_4983
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 51-129
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gfpA00 | 1.20.1720.10 | Mainly Alpha › Up-down Bundle › Multidrug resistance protein D › Multidrug resistance protein D | 0.64 | 54.0 | 3.58e-01 | 98.7% | 42.1% |
| 2imsA00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.60 | 51.0 | 4.08e-01 | 94.9% | 75.5% |
| 4cc9B00 | 1.20.5.4730 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.56 | 35.0 | 3.27e-01 | 74.7% | 50.0% |
| 1f5qB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.56 | 41.0 | 3.45e-01 | 78.5% | 78.3% |
| 2kuaA01 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.55 | 45.0 | 3.85e-01 | 98.7% | 79.5% |
| 6tqpA01 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.55 | 46.0 | 3.96e-01 | 98.7% | 80.1% |
| 6tmfT00 | 1.10.60.20 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 | 0.54 | 38.0 | 4.08e-01 | 74.7% | 98.4% |
| 2a3qA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.53 | 37.0 | 3.39e-01 | 74.7% | 76.1% |
| 2of7A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 40.0 | 3.38e-01 | 83.5% | 72.9% |
| 2lseA00 | 1.20.120.1360 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.52 | 36.0 | 3.43e-01 | 74.7% | 89.1% |
| 3ajfA00 | 1.20.1440.190 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tenuivirus movement protein | 0.52 | 39.0 | 3.71e-01 | 79.7% | 87.0% |
| 3eujB00 | 1.10.225.40 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › MukF, C-terminal domain | 0.52 | 40.0 | 3.91e-01 | 88.6% | 75.6% |
| 3u61D03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.51 | 35.0 | 3.40e-01 | 84.8% | 61.5% |
| 2xzmV01 | 1.10.60.20 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 | 0.51 | 36.0 | 3.92e-01 | 73.4% | 100.0% |
| 1e3pA02 | 1.10.10.400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain | 0.51 | 40.0 | 3.96e-01 | 84.8% | 100.0% |
| 1f45B00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.50 | 41.0 | 3.49e-01 | 89.9% | 92.5% |
| 3f2bA08 | 1.10.150.870 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.50 | 34.0 | 2.92e-01 | 74.7% | 40.1% |
| 3t69A02 | 3.30.420.310 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, C-terminal domain | 0.50 | 41.0 | 3.15e-01 | 100.0% | 51.8% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3988117 | 162.1.1.0 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD | 0.59 | 37.0 | 3.28e-01 | 70.9% | 43.5% |
| 3823567 | 109.4.1.1567 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Frigida | 0.59 | 46.0 | 3.70e-01 | 86.1% | 65.6% |
| 3959145 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.57 | 40.0 | 3.63e-01 | 73.4% | 94.5% |
| 3519854 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 42.0 | 2.69e-01 | 81.0% | 28.4% |
| 4236132 | 3254.1.1.1 ↗ | alpha arrays › helical domain in flagellar biosynthesis protein flhA › helical domain in flagellar biosynthesis protein flhA › helical domain in flagellar biosynthesis protein flhA › FHIPEP | 0.54 | 36.0 | 3.50e-01 | 73.4% | 60.0% |
| 3669124 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.53 | 36.0 | 2.53e-01 | 70.9% | 21.4% |
| 4463757 | 1075.4.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold | 0.51 | 39.0 | 2.65e-01 | 84.8% | 77.5% |
| 1148121 | 2484.1.1.46 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DGOK | 0.51 | 42.0 | 3.45e-01 | 100.0% | 68.8% |