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IMGVR_UViG_3300050501_000029-3300050501-nmdc-mga0dw27_12534_c1_7689_8078

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300050501_000029-3300050501-nmdc-mga0dw27_12534_c1_7689_8078 ↗
Kingdom:: archaea

Quality

82.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 33-87_114-125

PDB

Domain cluster: representative

CATH (12)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2b9dA01	3.30.160.330	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain ›	0.58	34.0	3.97e-01	92.5%	97.4%
3zfvA02	3.30.70.1900	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.57	49.0	3.84e-01	100.0%	91.7%
3gldA02	2.60.40.1140	Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain	0.57	47.0	3.84e-01	100.0%	47.8%
2pw9A01	4.10.80.30	Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › DNA polymerase; domain 6	0.57	25.0	3.22e-01	77.6%	96.0%
3qjlA02	3.30.70.1900	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.55	45.0	3.92e-01	100.0%	98.3%
4fcaA01	2.60.120.1250	Mainly Beta › Sandwich › Jelly Rolls › Peptidase M60, enhancin-like domain 1	0.55	45.0	3.92e-01	100.0%	58.7%
3i3lA02	3.30.390.160	Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 ›	0.52	44.0	3.64e-01	98.5%	79.2%
4mh4A02	3.30.300.20	Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain	0.51	39.0	3.58e-01	86.6%	94.7%
6m9yA00	3.30.1300.40	Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 ›	0.51	37.0	3.94e-01	79.1%	96.5%
6tmfM00	3.30.70.600	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10	0.51	43.0	3.84e-01	100.0%	98.0%
1d1rA00	3.30.780.10	Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain	0.51	40.0	3.83e-01	100.0%	75.9%
3dorA03	3.90.226.10	Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1	0.50	39.0	2.72e-01	88.1%	51.6%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3509507	2004.1.1.433 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23	0.64	47.0	2.90e-01	79.1%	81.5%
3968270	3103.1.1.2 ↗	alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Phage_TAC_13	0.56	41.0	3.56e-01	79.1%	83.6%
3663192	868.1.1.11 ↗	a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › DUF7903	0.56	39.0	2.81e-01	74.6%	45.9%
4654417	239.1.1.5 ↗	beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C	0.53	44.0	3.89e-01	94.0%	84.0%
3661686	304.114.1.2 ↗	a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain › POL3_N	0.53	43.0	3.83e-01	97.0%	97.1%
3711494	4956.1.1.0 ↗	a+b two layers › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	0.53	43.0	3.97e-01	100.0%	94.7%
3646145	206.1.1.1 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase	0.52	42.0	2.60e-01	88.1%	26.1%
3386540	2004.1.1.5 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran	0.50	39.0	2.81e-01	86.6%	32.7%