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IMGVR_UViG_3300050509_000421-3300050509-nmdc-mga0qj67_860_c1_10941_11780
Arc-VirIMGVR_UViG_3300050509_000421-3300050509-nmdc-mga0qj67_860_c1_10941_11780
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-62_178-275
Domain cluster:
rep: hypothetical_protein_AP053_gp196__YP_009172998__Ostreococcus_mediterraneus_virus_1__1663210__D8-165
CATH (70)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1x9pA01 | 2.60.120.550 | Mainly Beta › Sandwich › Jelly Rolls › Penton protein; domain 1 | 0.70 | 63.0 | 6.27e-01 | 95.6% | 99.4% |
| 4aw7A03 | 2.60.120.1200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 51.0 | 5.66e-01 | 95.6% | 100.0% |
| 3afgA03 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 41.0 | 4.97e-01 | 90.6% | 96.1% |
| 4ca9A00 | 2.60.120.340 | Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain | 0.66 | 40.0 | 4.95e-01 | 95.6% | 98.0% |
| 2id4A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.64 | 52.0 | 5.54e-01 | 98.7% | 99.3% |
| 6l4cA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 36.0 | 3.45e-01 | 94.3% | 47.3% |
| 3cu7A10 | 2.60.120.1540 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 44.0 | 4.99e-01 | 95.0% | 98.3% |
| 4lejA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 36.0 | 3.48e-01 | 94.3% | 48.9% |
| 1stmA00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.62 | 50.0 | 5.25e-01 | 95.0% | 96.5% |
| 4p02B01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.61 | 48.0 | 5.18e-01 | 93.7% | 100.0% |
| 2okxA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.60 | 43.0 | 4.24e-01 | 90.6% | 68.5% |
| 4zchA01 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 47.0 | 5.12e-01 | 89.9% | 100.0% |
| 1yq5A00 | 2.60.120.670 | Mainly Beta › Sandwich › Jelly Rolls › Minor capsid protein. | 0.60 | 50.0 | 5.24e-01 | 92.5% | 99.3% |
| 4llfD02 | 2.60.40.4030 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 41.0 | 4.62e-01 | 91.2% | 92.5% |
| 1pk6C00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 46.0 | 5.02e-01 | 94.3% | 99.2% |
| 4oumA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 47.0 | 5.09e-01 | 94.3% | 100.0% |
| 3w6wB02 | 2.60.310.20 | Mainly Beta › Sandwich › Hemocyanin; Chain: A, domain 2 › | 0.59 | 40.0 | 4.29e-01 | 93.7% | 79.4% |
| 7vt4A01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.59 | 42.0 | 4.65e-01 | 89.3% | 91.4% |
| 3l2hA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 32.0 | 3.37e-01 | 93.1% | 56.5% |
| 3l9bA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.58 | 41.0 | 4.51e-01 | 71.1% | 100.0% |
| 3wqbA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 52.0 | 5.18e-01 | 98.1% | 100.0% |
| 1uwwB00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 49.0 | 4.71e-01 | 90.6% | 93.3% |
| 1df0A03 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 46.0 | 4.98e-01 | 93.1% | 100.0% |
| 2g19A00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.57 | 40.0 | 3.59e-01 | 98.7% | 52.3% |
| 4msvA01 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 45.0 | 4.82e-01 | 91.2% | 100.0% |
| 2q1fA01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.56 | 47.0 | 4.69e-01 | 90.6% | 89.8% |
| 3azwA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 47.0 | 4.21e-01 | 92.5% | 87.0% |
| 1cx1A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 46.0 | 4.75e-01 | 91.2% | 96.1% |
| 5y4mA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 47.0 | 4.87e-01 | 93.1% | 100.0% |
| 1upsB01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 47.0 | 4.00e-01 | 94.3% | 95.8% |
| 2zewB00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 46.0 | 4.78e-01 | 92.5% | 99.3% |
| 4xaaA00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.54 | 39.0 | 3.52e-01 | 95.0% | 53.4% |
| 3jb4C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 47.0 | 4.10e-01 | 95.0% | 71.0% |
| 5k0uB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 46.0 | 4.12e-01 | 94.3% | 76.6% |
| 1uaiA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 43.0 | 3.87e-01 | 84.9% | 97.8% |
| 1ms5B02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 45.0 | 3.90e-01 | 90.6% | 77.0% |
| 2a6vB00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 45.0 | 4.12e-01 | 91.8% | 99.5% |
| 1f2nC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 47.0 | 4.32e-01 | 96.2% | 84.0% |
| 4gwmA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 45.0 | 4.50e-01 | 91.2% | 98.2% |
| 1ohfA02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 48.0 | 3.96e-01 | 100.0% | 97.0% |
| 4qpiB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 46.0 | 4.19e-01 | 95.6% | 75.1% |
| 6jhsA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 46.0 | 3.96e-01 | 96.2% | 88.5% |
| 7u6iA01 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.53 | 39.0 | 3.38e-01 | 96.2% | 50.0% |
| 1smvC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 46.0 | 4.17e-01 | 96.9% | 85.6% |
| 2vm9A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 46.0 | 4.69e-01 | 95.0% | 100.0% |
| 4dmiA02 | 2.60.120.1010 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 41.0 | 4.32e-01 | 96.9% | 94.2% |
| 8a28A02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 43.0 | 4.58e-01 | 88.7% | 100.0% |
| 4b97A00 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.53 | 43.0 | 4.46e-01 | 90.6% | 94.0% |
| 3cjiA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 46.0 | 3.96e-01 | 96.9% | 83.3% |
| 2ws9300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 45.0 | 4.02e-01 | 94.3% | 78.3% |
| 1mec100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 45.0 | 3.81e-01 | 95.0% | 79.6% |
| 2zxqA05 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 45.0 | 4.20e-01 | 93.7% | 94.9% |
| 1k12A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 46.0 | 4.66e-01 | 96.9% | 98.1% |
| 1g87A02 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.52 | 43.0 | 4.37e-01 | 90.6% | 93.1% |
| 1e57B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 45.0 | 4.37e-01 | 96.9% | 85.8% |
| 1c8dA00 | 2.170.30.10 | Mainly Beta › Beta Complex › Empty Capsid Viral Protein 2 › Parvovirus coat protein VP1/VP2 | 0.51 | 46.0 | 3.19e-01 | 98.1% | 88.7% |
| 7wdtA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 44.0 | 4.54e-01 | 92.5% | 100.0% |
| 5aooC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 44.0 | 3.99e-01 | 94.3% | 78.2% |
| 2c9aA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 43.0 | 4.36e-01 | 92.5% | 97.5% |
| 1j1tA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 44.0 | 3.92e-01 | 94.3% | 98.2% |
| 3vl9B00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.51 | 43.0 | 3.88e-01 | 91.2% | 81.0% |
| 1ksiA03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.51 | 41.0 | 3.09e-01 | 87.4% | 81.7% |
| 1qu0C00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 41.0 | 3.94e-01 | 86.2% | 86.3% |
| 3zpyB00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 42.0 | 3.70e-01 | 90.6% | 97.6% |
| 1auyB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 44.0 | 4.23e-01 | 96.9% | 82.5% |
| 8begA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 41.0 | 4.14e-01 | 86.8% | 92.5% |
| 2okxA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 40.0 | 3.78e-01 | 83.0% | 74.2% |
| 8begA03 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 41.0 | 4.21e-01 | 86.8% | 91.9% |
| 1gbgA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 43.0 | 3.95e-01 | 93.7% | 98.6% |
| 7dodB01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 45.0 | 4.23e-01 | 98.1% | 90.2% |
ECOD (82)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3229302 | 10.33.1.0 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in minor capsid protein › Jelly-roll domain in minor capsid protein | 0.88 | 74.0 | 7.97e-01 | 91.8% | 100.0% |
| 3624575 | 10.32.1.72 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD | 0.70 | 48.0 | 5.49e-01 | 93.1% | 92.5% |
| 5013968 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.69 | 43.0 | 5.28e-01 | 88.1% | 100.0% |
| 5019286 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.69 | 41.0 | 5.01e-01 | 91.8% | 93.0% |
| 5010847 | 10.2.1.72 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › PNGaseA | 0.68 | 52.0 | 5.73e-01 | 96.9% | 99.2% |
| 4960943 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.66 | 45.0 | 5.25e-01 | 81.8% | 100.0% |
| 3191338 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.66 | 38.0 | 4.35e-01 | 97.5% | 76.5% |
| 4020832 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.66 | 38.0 | 4.20e-01 | 97.5% | 70.4% |
| 4011220 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.66 | 49.0 | 5.41e-01 | 91.2% | 98.4% |
| 5039646 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.65 | 45.0 | 5.03e-01 | 91.8% | 93.3% |
| 3661818 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.64 | 44.0 | 5.12e-01 | 83.0% | 100.0% |
| 4491474 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.64 | 55.0 | 5.33e-01 | 93.1% | 99.4% |
| 5042963 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.64 | 54.0 | 5.58e-01 | 97.5% | 99.3% |
| 1412423 | 10.32.1.72 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD | 0.63 | 46.0 | 5.13e-01 | 92.5% | 94.5% |
| 4002865 | 10.32.1.6 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein | 0.63 | 51.0 | 5.39e-01 | 96.2% | 97.9% |
| 4025374 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.63 | 45.0 | 4.95e-01 | 95.6% | 92.8% |
| 3880815 | 10.3.1.14 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › CTHRC1_C | 0.62 | 51.0 | 5.44e-01 | 93.1% | 100.0% |
| 5039240 | 10.1.2.191 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › CBM60 | 0.62 | 48.0 | 5.29e-01 | 91.2% | 100.0% |
| 5083402 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.62 | 55.0 | 5.21e-01 | 95.6% | 99.5% |
| 4468775 | 10.2.1.55 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › NPL | 0.61 | 39.0 | 4.69e-01 | 91.2% | 100.0% |
| 5033996 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.61 | 52.0 | 4.54e-01 | 92.5% | 99.6% |
| 3895304 | 10.32.1.6 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein | 0.61 | 51.0 | 4.77e-01 | 96.9% | 72.8% |
| 3686285 | 10.32.1.4 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L | 0.61 | 42.0 | 4.83e-01 | 92.5% | 97.4% |
| 3241319 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.61 | 42.0 | 4.68e-01 | 93.1% | 91.7% |
| 1731080 | 10.2.1.21 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Ilar_coat | 0.61 | 47.0 | 4.90e-01 | 96.9% | 88.4% |
| 3756345 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.60 | 54.0 | 5.48e-01 | 98.1% | 98.8% |
| 3924070 | 10.4.1.32 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_M02D8_5_2nd | 0.60 | 42.0 | 4.63e-01 | 93.7% | 89.6% |
| 3296624 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.60 | 51.0 | 5.10e-01 | 93.7% | 88.7% |
| 3364460 | 10.32.1.203 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin | 0.60 | 51.0 | 5.36e-01 | 95.0% | 100.0% |
| 5042684 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.60 | 41.0 | 4.65e-01 | 95.0% | 92.5% |
| 4941983 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.60 | 49.0 | 5.20e-01 | 93.1% | 100.0% |
| 3902712 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.59 | 51.0 | 4.73e-01 | 95.0% | 72.2% |
| 3333290 | 10.32.1.203 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin | 0.59 | 52.0 | 5.01e-01 | 95.0% | 100.0% |
| 4577896 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.59 | 34.0 | 4.05e-01 | 93.1% | 82.4% |
| 4009866 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.59 | 43.0 | 4.35e-01 | 98.1% | 75.0% |
| 3314257 | 10.32.1.193 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MP | 0.58 | 50.0 | 4.92e-01 | 96.9% | 85.1% |
| 4945167 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.58 | 44.0 | 4.87e-01 | 97.5% | 100.0% |
| 3496981 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.58 | 37.0 | 3.26e-01 | 95.0% | 42.1% |
| 3889463 | 10.32.1.225 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF31127 | 0.58 | 48.0 | 4.86e-01 | 94.3% | 90.3% |
| 3927787 | 10.12.1.53 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 | 0.58 | 42.0 | 3.46e-01 | 98.1% | 41.8% |
| 5067810 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.58 | 43.0 | 4.72e-01 | 93.7% | 96.2% |
| 3175186 | 11.2.1.17 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › NT-C2 | 0.58 | 40.0 | 4.20e-01 | 70.4% | 95.8% |
| 5027230 | 10.7.1.0 ↗ | beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 | 0.57 | 32.0 | 4.14e-01 | 89.9% | 100.0% |
| 3505636 | 10.1.1.10 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM | 0.57 | 40.0 | 4.53e-01 | 86.2% | 95.0% |
| 3483295 | 10.3.1.0 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like | 0.57 | 47.0 | 4.89e-01 | 96.9% | 95.9% |
| 3172077 | 10.32.1.238 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29980 | 0.57 | 44.0 | 4.59e-01 | 95.0% | 88.3% |
| 4937335 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.57 | 48.0 | 4.71e-01 | 90.6% | 92.4% |
| 3222376 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.57 | 40.0 | 4.41e-01 | 91.8% | 92.0% |
| 3472554 | 10.32.1.6 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein | 0.57 | 51.0 | 5.04e-01 | 98.1% | 99.4% |
| 3889464 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.57 | 50.0 | 5.18e-01 | 95.0% | 100.0% |
| 3391776 | 10.32.1.69 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › LAMININ_IV_B | 0.56 | 50.0 | 4.54e-01 | 96.2% | 80.0% |
| 4012587 | 10.32.1.232 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4360 | 0.56 | 49.0 | 4.81e-01 | 94.3% | 100.0% |
| 3484479 | 10.2.1.18 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Cu2_monooxygen | 0.56 | 43.0 | 4.72e-01 | 94.3% | 100.0% |
| 3293493 | 10.32.1.33 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CIA30 | 0.56 | 48.0 | 4.49e-01 | 91.8% | 94.4% |
| 177408 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.55 | 36.0 | 3.15e-01 | 97.5% | 44.3% |
| 1141 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.55 | 46.0 | 4.75e-01 | 91.2% | 96.1% |
| 3746356 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.55 | 47.0 | 4.14e-01 | 95.6% | 63.5% |
| 3497743 | 10.12.1.5 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PMI_typeI_C | 0.55 | 38.0 | 3.89e-01 | 95.6% | 72.9% |
| 1233 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.55 | 48.0 | 4.55e-01 | 96.2% | 95.8% |
| 3252010 | 10.1.1.11 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 | 0.54 | 48.0 | 4.27e-01 | 98.1% | 100.0% |
| 2983138 | 10.2.1.88 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat | 0.54 | 46.0 | 4.09e-01 | 94.3% | 76.9% |
| 4268211 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.54 | 48.0 | 4.67e-01 | 97.5% | 93.7% |
| None | — | 0.54 | 45.0 | 3.82e-01 | 93.7% | 53.7% | |
| 3215162 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.53 | 42.0 | 4.06e-01 | 84.3% | 85.4% |
| 2721878 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.53 | 46.0 | 4.00e-01 | 95.0% | 75.2% |
| 1400716 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.53 | 46.0 | 4.19e-01 | 95.6% | 75.1% |
| 3620780 | 10.1.1.10 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM | 0.53 | 45.0 | 4.32e-01 | 93.1% | 97.8% |
| 4008238 | 11.1.5.58 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF1120 | 0.53 | 45.0 | 4.15e-01 | 93.7% | 97.2% |
| 4481031 | 10.1.1.11 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 | 0.52 | 45.0 | 4.00e-01 | 96.2% | 98.0% |
| 3195740 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.52 | 46.0 | 4.00e-01 | 98.7% | 92.5% |
| 4812688 | 10.12.1.43 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-Fe_Oxy_2 | 0.52 | 40.0 | 4.09e-01 | 95.6% | 82.6% |
| 1681795 | 10.32.1.53 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GalBD_like | 0.52 | 43.0 | 4.00e-01 | 90.6% | 90.3% |
| 289259 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.52 | 45.0 | 4.09e-01 | 97.5% | 84.9% |
| 2793614 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.51 | 46.0 | 4.17e-01 | 98.1% | 78.5% |
| 3306288 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.51 | 45.0 | 4.60e-01 | 95.6% | 100.0% |
| 3781908 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.51 | 40.0 | 4.31e-01 | 93.1% | 100.0% |
| 3975541 | 11.1.5.58 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF1120 | 0.51 | 43.0 | 3.98e-01 | 91.8% | 96.1% |
| 3543120 | 10.32.1.216 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MAM | 0.51 | 43.0 | 4.32e-01 | 91.8% | 99.4% |
| 5021919 | 10.1.2.194 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › Lectin_like | 0.51 | 42.0 | 4.20e-01 | 91.2% | 97.1% |
| 3980411 | 11.1.5.58 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF1120 | 0.50 | 43.0 | 4.16e-01 | 92.5% | 95.0% |
| 4974487 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.50 | 43.0 | 4.21e-01 | 91.8% | 100.0% |
| 4970162 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.50 | 42.0 | 4.17e-01 | 89.3% | 100.0% |
D2
high
residues 67-173
Domain cluster:
rep: hypothetical_protein_BNJ_00443__YP_009352835__Kaumoebavirus_Viruses.__X__D51-156
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4g5aA00 | 2.60.40.3080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.65 | 39.0 | 4.10e-01 | 86.9% | 65.7% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.62 | 34.0 | 3.93e-01 | 75.7% | 73.7% |
| 5jh8A02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.59 | 25.0 | 3.04e-01 | 93.5% | 58.2% |
| 3cz8A02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.58 | 24.0 | 3.18e-01 | 93.5% | 68.4% |
| 4pofA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.58 | 29.0 | 3.89e-01 | 72.9% | 100.0% |
| 3djcB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.57 | 41.0 | 4.48e-01 | 96.3% | 90.9% |
| 4zrlA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.54 | 37.0 | 3.61e-01 | 70.1% | 92.3% |
| 4jbeB01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.52 | 39.0 | 2.90e-01 | 79.4% | 89.0% |
| 2w3oB00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.52 | 42.0 | 4.30e-01 | 96.3% | 93.1% |
| 3p2mA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 41.0 | 3.10e-01 | 88.8% | 80.8% |
| 1yuaA02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.51 | 25.0 | 3.30e-01 | 99.1% | 86.2% |
| 2faoA01 | 3.90.920.10 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain | 0.51 | 42.0 | 3.16e-01 | 92.5% | 92.2% |
| 3k1lA02 | 3.30.457.30 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › | 0.50 | 30.0 | 3.21e-01 | 86.9% | 66.7% |
| 5izdA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.50 | 45.0 | 3.34e-01 | 100.0% | 95.4% |
| 1i5pA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.50 | 37.0 | 3.30e-01 | 77.6% | 70.3% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3605879 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.66 | 25.0 | 3.86e-01 | 73.8% | 82.2% |
| 4967222 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.61 | 33.0 | 4.16e-01 | 74.8% | 91.7% |
| 4951473 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.61 | 33.0 | 3.97e-01 | 72.9% | 85.7% |
| 4160542 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.60 | 32.0 | 4.07e-01 | 74.8% | 94.8% |
| 2831852 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.59 | 33.0 | 3.37e-01 | 74.8% | 55.4% |
| 3993351 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.55 | 41.0 | 2.95e-01 | 78.5% | 83.3% |
| 4992387 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.55 | 47.0 | 4.41e-01 | 93.5% | 98.5% |
| 3999358 | 387.1.5.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like | 0.53 | 29.0 | 3.82e-01 | 78.5% | 98.3% |
| 3625473 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.52 | 38.0 | 2.83e-01 | 76.6% | 77.7% |
| 3478866 | 4135.1.1.0 ↗ | beta duplicates or obligate multimers › MAL13P1.257-like › MAL13P1.257-like › MAL13P1.257-like | 0.52 | 42.0 | 3.75e-01 | 89.7% | 86.3% |
| 3402001 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.52 | 29.0 | 3.15e-01 | 75.7% | 64.4% |
| 3968768 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.50 | 34.0 | 3.84e-01 | 72.9% | 98.7% |