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IMGVR_UViG_3300051397_000034-3300051397-Ga0531430_02953_1970_2104

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300051397_000034-3300051397-Ga0531430_02953_1970_2104 ↗
Kingdom:: archaea

Quality

90.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-43

PDB

Domain cluster: representative

CATH (19)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2lnzA00	1.10.286.70	Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › Get5 dimerization domain	0.90	75.0	7.59e-01	92.7%	92.5%
1cp9A02	1.10.287.150	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.87	60.0	6.67e-01	78.0%	100.0%
2f4lA03	3.10.28.20	Alpha Beta › Roll › Endonuclease I-creI › Acetamidase/Formamidase-like domains	0.79	60.0	4.77e-01	100.0%	42.5%
3lcvB01	1.10.8.10	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain	0.77	62.0	5.69e-01	95.1%	66.7%
1grjA01	1.10.287.180	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain	0.76	51.0	4.19e-01	70.7%	44.6%
1rr7A01	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.75	62.0	6.01e-01	95.1%	89.1%
1j78A05	1.10.246.10	Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 ›	0.75	62.0	5.59e-01	97.6%	75.0%
1umqA00	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.75	51.0	4.58e-01	73.2%	50.0%
2g5gX02	1.10.8.760	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Haem-binding uptake, Tiki superfamily, ChaN, domain 2	0.74	57.0	5.06e-01	85.4%	71.2%
5vjhB03	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.70	57.0	3.61e-01	92.7%	18.3%
1dt9A01	3.30.960.10	Alpha Beta › 2-Layer Sandwich › Translation, Eukaryotic Peptide Chain Release Factor Subunit 1; Chain A › eRF1 domain 1	0.69	51.0	3.74e-01	87.8%	30.5%
2gv9A05	1.10.287.690	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain	0.68	55.0	4.89e-01	90.2%	66.1%
1f20A01	3.40.50.80	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module	0.67	54.0	3.68e-01	95.1%	24.5%
3f2eA00	1.20.58.800	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.67	54.0	4.40e-01	97.6%	47.0%
1jwjA01	3.90.340.10	Alpha Beta › Alpha-Beta Complex › Nitric Oxide Synthase; Chain A, domain 1 › Nitric Oxide Synthase; Chain A, domain 1	0.66	51.0	3.51e-01	92.7%	23.7%
2mh3A00	4.10.280.10	Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Helix-loop-helix DNA-binding domain	0.66	49.0	4.10e-01	80.5%	58.6%
1n69B00	1.10.225.10	Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like	0.60	47.0	4.04e-01	100.0%	52.5%
2dflA01	1.10.150.20	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain	0.60	42.0	3.82e-01	85.4%	53.3%
2doeA00	1.10.10.440	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain	0.60	50.0	4.03e-01	97.6%	54.2%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5003091	103.1.1.0 ↗	alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain	0.81	63.0	5.62e-01	87.8%	60.0%
4936146	101.35.1.0 ↗	alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX	0.75	64.0	5.87e-01	97.6%	83.6%
3570117	375.6.1.2 ↗	few secondary structure elements › Rubredoxin-like › FlhC-like › FlhC-like › PF31275	0.71	60.0	5.31e-01	97.6%	65.0%
3269592	198.1.1.2 ↗	alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1	0.66	52.0	4.25e-01	97.6%	44.7%