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IMGVR_UViG_638154508_000001-638154508-638178666
Arc-VirIMGVR_UViG_638154508_000001-638154508-638178666
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-96_430-474
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ci3M02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.76 | 20.0 | 3.04e-01 | 92.7% | 50.0% |
| 1hp7A01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.71 | 26.0 | 2.96e-01 | 100.0% | 41.1% |
| 1b69A00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.60 | 22.0 | 2.91e-01 | 95.9% | 58.0% |
| 2d42A02 | 3.10.450.380 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 22.0 | 2.96e-01 | 93.5% | 60.0% |
| 3ci0J02 | 2.10.70.20 | Mainly Beta › Ribbon › Complement Module; domain 1 › gspk-gspi-gspj complex like domains | 0.56 | 25.0 | 3.45e-01 | 95.9% | 94.0% |
| 1kf6A04 | 4.10.80.40 | Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › succinate dehydrogenase protein domain | 0.54 | 16.0 | 3.13e-01 | 87.0% | 97.1% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5017699 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.99 | 94.0 | 9.59e-01 | 98.4% | 100.0% |
| 5017690 | 101.1.6.43 ↗ | alpha arrays › HTH › HTH › TrpR › DUF4277 | 0.73 | 63.0 | 6.44e-01 | 99.2% | 95.8% |
| 4314239 | 3433.1.2.1 ↗ | a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain › ParB_dimer | 0.58 | 24.0 | 3.47e-01 | 100.0% | 88.0% |
| 3989790 | 3433.1.2.1 ↗ | a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain › ParB_dimer | 0.57 | 24.0 | 3.34e-01 | 100.0% | 88.0% |
| 4236584 | 3433.1.2.1 ↗ | a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain › ParB_dimer | 0.56 | 24.0 | 3.34e-01 | 100.0% | 90.0% |
D2
medium
residues 115-278_361-405
Domain cluster:
rep: KX077896.1__ANM47701.1__X__00070__D117-246_318-381
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01609.28 best | DDE_Tnp_1 | 44.9 | 1.60e-11 | 96.2% | 87.0% |
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kksB00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.79 | 46.0 | 5.35e-01 | 95.2% | 78.3% |
| 7oufB01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.79 | 46.0 | 5.51e-01 | 93.8% | 82.6% |
| 2x6nD00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.78 | 45.0 | 4.92e-01 | 96.2% | 66.9% |
| 1asuA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.78 | 49.0 | 5.52e-01 | 95.7% | 80.2% |
| 5cz2C00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.78 | 45.0 | 5.28e-01 | 95.7% | 78.9% |
| 3ctzA01 | 3.40.350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain | 0.52 | 32.0 | 3.79e-01 | 85.6% | 85.0% |
| 2vchA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.52 | 41.0 | 3.80e-01 | 80.4% | 95.3% |
| 2f9wA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 31.0 | 3.78e-01 | 83.7% | 93.1% |
| 3ie7A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 41.0 | 3.64e-01 | 84.2% | 93.5% |
| 3dfuA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 30.0 | 3.70e-01 | 81.8% | 91.5% |
| 5ysqB00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 41.0 | 3.74e-01 | 84.2% | 97.1% |
| 3ff4A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 29.0 | 3.67e-01 | 83.7% | 94.2% |
| 1u9yA02 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 28.0 | 3.54e-01 | 79.9% | 89.5% |
| 2vk2A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 32.0 | 3.93e-01 | 79.9% | 100.0% |
| 2dstA00 | 3.40.50.12270 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 28.0 | 3.56e-01 | 85.6% | 91.0% |
| 4mptA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.50 | 32.0 | 3.76e-01 | 78.0% | 89.8% |
ECOD (86)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5017700 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 1.00 | 98.0 | 8.23e-01 | 100.0% | 81.3% |
| 3509891 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.89 | 86.0 | 6.95e-01 | 100.0% | 82.5% |
| 5017696 | 2484.1.1.336 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4277 | 0.89 | 86.0 | 6.81e-01 | 100.0% | 60.8% |
| 5017703 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.88 | 86.0 | 7.16e-01 | 100.0% | 73.2% |
| 5017691 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.88 | 85.0 | 7.14e-01 | 100.0% | 76.6% |
| 3942981 | 2484.1.1.269 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_4 | 0.87 | 84.0 | 6.74e-01 | 100.0% | 64.3% |
| 4992937 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.86 | 83.0 | 6.83e-01 | 100.0% | 68.4% |
| 3961717 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.86 | 83.0 | 6.69e-01 | 100.0% | 65.3% |
| 5060820 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.86 | 82.0 | 6.15e-01 | 100.0% | 63.0% |
| 3960382 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.85 | 82.0 | 6.59e-01 | 100.0% | 65.8% |
| 3590948 | 105.1.1.0 ↗ | alpha duplicates or obligate multimers › HLH-like › HLH, helix-loop-helix DNA-binding domain › HLH, helix-loop-helix DNA-binding domain | 0.85 | 66.0 | 6.11e-01 | 100.0% | 65.1% |
| 3515559 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.84 | 55.0 | 6.31e-01 | 85.6% | 86.3% |
| 5058150 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.84 | 67.0 | 6.08e-01 | 100.0% | 63.7% |
| 4958315 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.83 | 70.0 | 6.07e-01 | 100.0% | 60.7% |
| 4928272 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.82 | 48.0 | 5.64e-01 | 93.3% | 79.7% |
| 3588441 | 2484.1.1.194 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve, rve_3 | 0.81 | 50.0 | 5.68e-01 | 95.7% | 78.8% |
| 3962721 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.81 | 46.0 | 6.15e-01 | 91.9% | 100.0% |
| 5061579 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.81 | 76.0 | 6.25e-01 | 100.0% | 71.7% |
| 3283899 | 2484.1.1.148 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_5 | 0.81 | 76.0 | 6.29e-01 | 100.0% | 81.4% |
| 4961486 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.80 | 77.0 | 6.11e-01 | 100.0% | 65.5% |
| 4009433 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 77.0 | 6.19e-01 | 100.0% | 64.9% |
| 4248295 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 77.0 | 6.32e-01 | 100.0% | 68.7% |
| 5019203 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.80 | 62.0 | 6.02e-01 | 100.0% | 72.6% |
| 5053278 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.80 | 76.0 | 6.13e-01 | 100.0% | 67.6% |
| 4962044 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.79 | 60.0 | 5.42e-01 | 100.0% | 59.6% |
| 3480819 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.79 | 47.0 | 5.31e-01 | 95.7% | 75.2% |
| 3970986 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 65.0 | 5.56e-01 | 100.0% | 56.7% |
| 2771818 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.79 | 45.0 | 5.06e-01 | 96.2% | 70.6% |
| 4958657 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.78 | 48.0 | 5.54e-01 | 75.6% | 81.9% |
| 3933447 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.78 | 40.0 | 5.69e-01 | 88.0% | 100.0% |
| 4958703 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.78 | 74.0 | 6.31e-01 | 100.0% | 66.3% |
| 5021851 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.78 | 74.0 | 6.11e-01 | 100.0% | 63.8% |
| 3925232 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.78 | 45.0 | 4.74e-01 | 96.2% | 63.2% |
| 5027997 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.78 | 64.0 | 5.86e-01 | 100.0% | 68.0% |
| 3937782 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.77 | 44.0 | 4.96e-01 | 95.2% | 70.9% |
| 4958777 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.77 | 74.0 | 6.26e-01 | 100.0% | 66.6% |
| 4977119 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.77 | 65.0 | 6.37e-01 | 100.0% | 80.9% |
| 5002475 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.77 | 74.0 | 6.01e-01 | 100.0% | 64.2% |
| 5053144 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.77 | 71.0 | 5.99e-01 | 100.0% | 61.7% |
| 185388 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.76 | 47.0 | 4.80e-01 | 95.7% | 62.7% |
| 3955433 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.76 | 50.0 | 5.38e-01 | 95.7% | 76.1% |
| 3937267 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.76 | 45.0 | 4.69e-01 | 95.7% | 62.6% |
| 3935131 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.76 | 45.0 | 5.09e-01 | 95.7% | 74.5% |
| 4946348 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.76 | 72.0 | 6.33e-01 | 100.0% | 73.2% |
| 4149684 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.76 | 72.0 | 6.56e-01 | 100.0% | 80.0% |
| 4150748 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.76 | 44.0 | 5.03e-01 | 93.3% | 75.0% |
| 4944889 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.75 | 59.0 | 6.27e-01 | 93.3% | 90.8% |
| 3531857 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.75 | 47.0 | 5.13e-01 | 96.2% | 74.9% |
| 4945072 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.75 | 63.0 | 5.65e-01 | 100.0% | 65.4% |
| 4961941 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.75 | 71.0 | 5.68e-01 | 100.0% | 59.9% |
| 3957251 | 4325.1.1.0 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like | 0.74 | 41.0 | 5.48e-01 | 74.6% | 99.1% |
| 4966168 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.74 | 70.0 | 5.79e-01 | 100.0% | 61.4% |
| 3352391 | 2484.1.1.103 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Tab2-like_N | 0.74 | 45.0 | 5.62e-01 | 97.1% | 97.7% |
| None | — | 0.73 | 45.0 | 4.75e-01 | 97.1% | 67.4% | |
| 3897539 | 2484.1.1.145 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_7 | 0.73 | 68.0 | 5.45e-01 | 99.0% | 82.1% |
| 4142588 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.73 | 56.0 | 5.97e-01 | 78.9% | 100.0% |
| 4220848 | 2484.1.1.103 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Tab2-like_N | 0.73 | 45.0 | 4.36e-01 | 97.6% | 54.9% |
| 3880867 | 2484.1.1.145 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_7 | 0.72 | 68.0 | 5.42e-01 | 100.0% | 87.5% |
| 3895909 | 2484.1.1.145 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_7 | 0.72 | 69.0 | 6.15e-01 | 100.0% | 82.9% |
| 3411713 | 2484.1.1.145 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_7 | 0.72 | 61.0 | 5.03e-01 | 100.0% | 52.4% |
| 3587330 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 69.0 | 5.39e-01 | 100.0% | 68.1% |
| 3940145 | 2484.1.1.145 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_7 | 0.72 | 68.0 | 5.38e-01 | 100.0% | 54.7% |
| 5019257 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.71 | 68.0 | 6.01e-01 | 100.0% | 85.2% |
| 3254993 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.71 | 48.0 | 4.37e-01 | 100.0% | 51.8% |
| 3561766 | 2484.1.1.145 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_7 | 0.71 | 67.0 | 5.51e-01 | 100.0% | 60.6% |
| 3926548 | 2484.1.1.145 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_7 | 0.71 | 66.0 | 5.93e-01 | 100.0% | 75.8% |
| 5006321 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.69 | 66.0 | 5.56e-01 | 100.0% | 63.8% |
| 3403732 | 2484.1.1.145 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_7 | 0.69 | 65.0 | 5.43e-01 | 100.0% | 67.6% |
| 3568382 | 2484.1.1.145 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_7 | 0.69 | 65.0 | 5.15e-01 | 100.0% | 58.5% |
| 3914514 | 2484.1.1.145 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_7 | 0.69 | 64.0 | 5.46e-01 | 100.0% | 67.6% |
| 3920719 | 2484.1.1.145 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_7 | 0.68 | 64.0 | 5.56e-01 | 100.0% | 67.9% |
| 3920450 | 2484.1.1.145 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_7 | 0.68 | 57.0 | 5.41e-01 | 86.6% | 85.3% |
| 5008723 | 2484.1.1.66 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_3 | 0.67 | 45.0 | 4.92e-01 | 95.7% | 81.1% |
| 3751034 | 2484.1.1.145 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_7 | 0.66 | 62.0 | 5.74e-01 | 100.0% | 81.7% |
| 3929524 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.65 | 45.0 | 4.83e-01 | 98.1% | 81.1% |
| 4661573 | 2484.1.1.145 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_7 | 0.64 | 60.0 | 4.83e-01 | 100.0% | 53.8% |
| 3590896 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.64 | 60.0 | 5.02e-01 | 100.0% | 89.0% |
| 3415287 | 2484.1.1.120 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_4 | 0.63 | 52.0 | 5.27e-01 | 100.0% | 86.3% |
| 3961975 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.59 | 26.0 | 3.48e-01 | 93.8% | 73.9% |
| 5065275 | 2006.1.4.3 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN | 0.58 | 31.0 | 3.79e-01 | 81.8% | 78.5% |
| 4116094 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.57 | 31.0 | 4.06e-01 | 81.8% | 94.8% |
| 3926267 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.56 | 40.0 | 4.61e-01 | 95.7% | 96.2% |
| 3435356 | 2484.1.1.103 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Tab2-like_N | 0.53 | 44.0 | 3.95e-01 | 89.0% | 99.0% |
| 4964986 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.52 | 24.0 | 3.34e-01 | 89.5% | 88.0% |
| 4937238 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.50 | 22.0 | 3.10e-01 | 91.9% | 82.9% |
| 5040231 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.50 | 23.0 | 3.21e-01 | 90.4% | 88.0% |
D3
medium
residues 279-316_331-360
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2uyyA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.70 | 57.0 | 4.55e-01 | 85.3% | 92.7% |
| 3w6zA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.67 | 54.0 | 4.41e-01 | 85.3% | 93.4% |
| 2d4uB00 | 1.20.120.30 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartate receptor, ligand-binding domain | 0.66 | 54.0 | 4.08e-01 | 95.6% | 38.7% |
| 3b77B02 | 1.10.287.210 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.65 | 59.0 | 5.43e-01 | 98.5% | 89.7% |
| 3ufbA01 | 1.20.1260.30 | Mainly Alpha › Up-down Bundle › Ferritin › N6 adenine-specific DNA methyltransferase, N-terminal domain | 0.64 | 49.0 | 3.74e-01 | 82.4% | 69.2% |
| 1vq8V00 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.63 | 48.0 | 4.97e-01 | 85.3% | 84.6% |
| 5lo9A01 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.61 | 40.0 | 3.71e-01 | 72.1% | 52.3% |
| 3terA00 | 1.10.287.3550 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 54.0 | 4.40e-01 | 95.6% | 65.5% |
| 2yf4F00 | 1.10.3420.10 | Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain | 0.60 | 50.0 | 3.88e-01 | 92.6% | 42.7% |
| 5hxgB00 | 1.10.4000.10 | Mainly Alpha › Orthogonal Bundle › Flagellar transcriptional activator fold › Flagellar transcriptional activator FlhD | 0.60 | 48.0 | 4.90e-01 | 89.7% | 92.3% |
| 4n6cB00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.60 | 51.0 | 3.79e-01 | 97.1% | 76.8% |
| 3crmA02 | 1.10.287.890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain | 0.59 | 46.0 | 4.32e-01 | 85.3% | 96.4% |
| 6j8eA01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.58 | 49.0 | 4.34e-01 | 98.5% | 94.3% |
| 2p9bA04 | 1.20.58.520 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Amidohydrolase | 0.58 | 42.0 | 3.80e-01 | 76.5% | 80.4% |
| 2xseA00 | 1.20.120.1440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › JBP1, DNA-binding domain | 0.57 | 51.0 | 3.84e-01 | 98.5% | 86.8% |
| 3rklA00 | 6.10.140.1640 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 45.0 | 4.28e-01 | 91.2% | 72.5% |
| 3tl4X02 | 1.10.10.2420 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.54 | 36.0 | 3.61e-01 | 91.2% | 65.3% |
| 4mlmA00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.51 | 42.0 | 3.17e-01 | 94.1% | 100.0% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3964663 | 129.1.1.16 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › NAD_binding_11 | 0.70 | 56.0 | 4.51e-01 | 85.3% | 91.9% |
| 146969 | 3191.1.1.1 ↗ | alpha duplicates or obligate multimers › RyR motifs › RyR motifs › RyR motifs › RyR | 0.69 | 53.0 | 3.88e-01 | 83.8% | 90.5% |
| 5004208 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.65 | 53.0 | 3.70e-01 | 88.2% | 31.0% |
| 3796175 | 192.15.1.99 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › PF31025 | 0.65 | 46.0 | 5.16e-01 | 77.9% | 94.3% |
| 3536912 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.63 | 55.0 | 3.58e-01 | 94.1% | 33.6% |
| 4936868 | 192.4.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29 | 0.62 | 47.0 | 4.46e-01 | 83.8% | 67.5% |
| 270760 | 192.4.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29 | 0.62 | 48.0 | 4.92e-01 | 85.3% | 84.6% |
| 4026611 | 4984.1.1.0 ↗ | alpha bundles › Duffy-binding-like domain, C-terminal subdomain › Duffy-binding-like domain, C-terminal subdomain › Duffy-binding-like domain, C-terminal subdomain | 0.62 | 56.0 | 3.34e-01 | 100.0% | 76.0% |
| 3876590 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.61 | 53.0 | 4.86e-01 | 92.6% | 81.2% |
| 3240217 | 603.1.1.105 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF31021 | 0.60 | 50.0 | 4.50e-01 | 94.1% | 65.3% |
| 3479808 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.60 | 54.0 | 4.17e-01 | 98.5% | 89.3% |
| 2636645 | 192.15.1.2 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Mod_r | 0.59 | 52.0 | 5.24e-01 | 92.6% | 94.0% |
| 3240347 | 3016.1.1.1 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 | 0.59 | 52.0 | 3.78e-01 | 97.1% | 100.0% |
| 3628964 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.59 | 49.0 | 3.35e-01 | 89.7% | 93.5% |
| 3489794 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.59 | 52.0 | 4.00e-01 | 95.6% | 79.3% |
| 3739122 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 52.0 | 3.45e-01 | 95.6% | 25.5% |
| 3628960 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.57 | 49.0 | 3.39e-01 | 95.6% | 82.9% |
| 3995957 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.57 | 53.0 | 3.70e-01 | 100.0% | 34.0% |
| 3731488 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.56 | 45.0 | 3.73e-01 | 85.3% | 58.3% |
| 3750083 | 142.1.1.17 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › SPATIAL | 0.54 | 31.0 | 3.29e-01 | 75.0% | 65.0% |