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IMGVR_UViG_638154508_000001-638154508-638178668

Arc-Vir

IMGVR_UViG_638154508_000001-638154508-638178668

Identity

Kingdom:
archaea

Quality

91.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-93_178-237
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF01609.28 best DDE_Tnp_1 39.5 7.60e-10 93.8% 87.0%
PF13751.13 DDE_Tnp_1_6 32.5 1.30e-07 42.1% 44.0%
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3kksB00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.79 67.0 6.63e-01 97.2% 84.2%
2x6nD00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.78 64.0 5.92e-01 96.6% 69.7%
5cz2C00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.77 64.0 6.36e-01 97.2% 82.9%
7ue1B01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.76 64.0 6.46e-01 95.9% 88.9%
1asuA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.75 68.0 6.54e-01 96.6% 85.8%
7oufB01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.74 66.0 6.56e-01 96.6% 90.6%
4mdaA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.67 59.0 5.32e-01 95.9% 71.5%
5cr4A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.67 60.0 5.14e-01 96.6% 73.2%
2z6iA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.54 45.0 3.53e-01 90.3% 89.9%
1s2uB00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.53 42.0 3.35e-01 82.8% 85.8%
3slkA02 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.53 42.0 3.31e-01 86.2% 71.9%
4h33A00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.52 26.0 3.28e-01 90.3% 78.0%
3iupA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.50 37.0 3.48e-01 77.9% 92.6%
4a0gD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 43.0 3.58e-01 95.2% 95.2%
ECOD (95)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5019257 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.93 90.0 6.88e-01 100.0% 82.4%
5020443 2484.1.1.18 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.93 90.0 6.84e-01 100.0% 59.0%
3955806 2484.1.1.18 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.93 89.0 8.42e-01 99.3% 97.6%
3590948 105.1.1.0 alpha duplicates or obligate multimers › HLH-like › HLH, helix-loop-helix DNA-binding domain › HLH, helix-loop-helix DNA-binding domain 0.93 89.0 7.14e-01 100.0% 60.4%
3587330 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.93 89.0 6.18e-01 100.0% 57.8%
3515559 2484.1.1.18 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.92 89.0 8.56e-01 100.0% 99.4%
4958315 2484.1.1.18 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.92 88.0 6.68e-01 100.0% 56.3%
3942207 2484.1.1.18 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.91 86.0 7.93e-01 97.2% 96.6%
4954372 2484.1.1.18 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.91 87.0 6.74e-01 100.0% 60.7%
4992937 2484.1.1.18 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.89 85.0 6.24e-01 100.0% 65.2%
4958657 2484.1.1.18 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.89 76.0 7.38e-01 87.6% 96.8%
4662521 2484.1.1.146 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_Tn3 0.89 79.0 6.07e-01 93.1% 46.3%
4950545 2484.1.1.18 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.89 75.0 7.63e-01 86.2% 100.0%
5017700 2484.1.1.18 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.89 85.0 6.37e-01 100.0% 78.1%
3970986 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.88 84.0 6.31e-01 99.3% 53.2%
4518542 2484.1.1.146 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_Tn3 0.88 84.0 6.22e-01 100.0% 51.1%
3953062 2484.1.1.18 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.87 81.0 7.83e-01 96.6% 99.4%
4498604 2484.1.1.18 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.86 80.0 7.95e-01 96.6% 98.0%
5017703 2484.1.1.18 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.86 82.0 6.12e-01 100.0% 68.3%
4514424 2484.1.1.18 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.86 81.0 6.15e-01 100.0% 56.1%
5004369 2484.1.1.18 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.85 78.0 5.86e-01 95.9% 62.9%
3509891 2484.1.1.18 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.84 80.0 5.80e-01 100.0% 79.7%
4034539 105.1.1.84 alpha duplicates or obligate multimers › HLH-like › HLH, helix-loop-helix DNA-binding domain › HLH, helix-loop-helix DNA-binding domain › DDE_Tnp_1_6 0.84 77.0 7.47e-01 96.6% 100.0%
4932086 2484.1.1.18 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.83 78.0 6.83e-01 97.2% 79.0%
5005232 2484.1.1.332 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF772 0.82 77.0 5.93e-01 100.0% 48.8%
5019203 2484.1.1.18 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.82 78.0 6.51e-01 99.3% 66.1%
5060820 2484.1.1.18 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.82 76.0 5.24e-01 100.0% 60.2%
4940124 2484.1.1.18 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.81 76.0 5.81e-01 98.6% 59.1%
4961941 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.81 76.0 5.49e-01 100.0% 59.1%
4966168 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.80 75.0 5.54e-01 99.3% 57.4%
4946151 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.80 58.0 6.66e-01 89.7% 100.0%
3937782 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.80 64.0 6.09e-01 97.2% 72.7%
3925663 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.79 67.0 6.23e-01 97.2% 73.1%
3937850 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.79 67.0 6.27e-01 97.2% 75.3%
4946348 2484.1.1.18 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.78 72.0 5.56e-01 97.2% 66.8%
4966198 2484.1.1.18 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.78 71.0 5.79e-01 96.6% 55.4%
3933447 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.78 54.0 6.29e-01 77.2% 97.1%
3930504 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.78 65.0 6.20e-01 93.1% 76.4%
4961488 2484.1.1.18 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.78 74.0 5.22e-01 100.0% 56.5%
3937267 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.77 64.0 5.75e-01 97.2% 64.6%
3955433 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.77 70.0 6.49e-01 96.6% 82.2%
3480819 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.77 66.0 6.29e-01 96.6% 79.4%
3924869 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.77 65.0 6.18e-01 97.2% 75.9%
3970062 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.77 69.0 6.32e-01 97.2% 74.6%
3935879 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.77 69.0 6.12e-01 97.2% 69.7%
3216765 2484.1.1.297 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve, rve_3, PF29688 0.77 65.0 6.04e-01 97.2% 72.2%
4336164 2484.1.1.194 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve, rve_3 0.76 69.0 6.35e-01 97.2% 76.7%
3935131 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.76 65.0 6.21e-01 97.2% 78.8%
428031 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.76 64.0 6.66e-01 91.7% 93.4%
4928272 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.76 69.0 6.77e-01 98.6% 90.8%
2771818 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.76 64.0 6.01e-01 97.2% 74.7%
3924148 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.75 63.0 5.98e-01 97.2% 76.4%
3939670 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.75 63.0 5.89e-01 97.2% 73.1%
3940128 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.75 65.0 5.85e-01 97.2% 68.2%
3588051 2484.1.1.202 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve, rve_2 0.74 66.0 6.13e-01 97.2% 76.1%
4009918 2484.1.1.18 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.74 67.0 5.27e-01 95.9% 83.5%
3933107 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.74 63.0 6.43e-01 89.7% 92.1%
3927688 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.74 67.0 6.39e-01 97.2% 83.6%
4150748 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.74 63.0 6.06e-01 96.6% 80.6%
5007658 2484.1.1.66 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_3 0.73 60.0 6.25e-01 91.0% 92.6%
3925598 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.73 66.0 6.12e-01 96.6% 78.3%
3210952 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.73 65.0 6.37e-01 98.6% 87.7%
3984567 2484.1.1.127 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve_2 0.73 56.0 6.23e-01 79.3% 100.0%
3931350 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.73 68.0 5.83e-01 97.9% 87.0%
3939024 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.73 68.0 5.78e-01 97.9% 84.1%
3420098 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.73 67.0 5.79e-01 97.2% 88.4%
3531857 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.73 66.0 6.14e-01 97.2% 78.9%
3783161 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.73 67.0 5.79e-01 97.9% 88.4%
3930363 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.72 67.0 5.69e-01 97.2% 82.3%
3939156 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.72 66.0 5.95e-01 97.2% 86.2%
185388 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.72 67.0 5.84e-01 97.2% 84.8%
3424158 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.72 66.0 5.48e-01 97.2% 80.0%
3927798 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.72 65.0 5.61e-01 97.2% 84.5%
3888097 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.71 66.0 5.20e-01 97.9% 64.3%
3934189 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.71 66.0 5.65e-01 97.2% 82.3%
3934129 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.71 65.0 5.72e-01 97.2% 85.9%
3252840 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.71 65.0 5.37e-01 97.2% 85.7%
3903903 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.71 66.0 5.93e-01 97.9% 78.9%
3936325 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.71 66.0 5.59e-01 98.6% 83.6%
3460608 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.70 64.0 5.53e-01 97.2% 82.3%
3928301 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.70 64.0 6.04e-01 97.2% 82.4%
3249604 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.70 64.0 5.52e-01 97.2% 82.3%
3248396 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.70 56.0 5.36e-01 83.4% 92.7%
3274129 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.70 64.0 5.57e-01 97.2% 86.2%
3926417 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.70 63.0 6.12e-01 97.2% 88.1%
3672736 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.69 63.0 5.94e-01 97.9% 82.3%
4291495 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.68 62.0 5.80e-01 97.2% 82.9%
3462514 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.68 62.0 5.75e-01 97.9% 80.0%
3504836 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.67 62.0 5.49e-01 97.9% 78.5%
4339297 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.67 61.0 5.45e-01 97.2% 83.6%
4986795 2484.1.1.66 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_3 0.67 60.0 5.76e-01 97.2% 87.9%
4643206 2484.1.1.199 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_mut 0.66 59.0 5.50e-01 97.2% 78.9%
4505130 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.65 45.0 4.85e-01 71.7% 92.0%
3928405 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.57 37.0 4.28e-01 80.7% 90.5%
3884837 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 47.0 4.32e-01 98.6% 76.8%
D2 high residues 104-164
PDB
Domain cluster: representative
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4qrlA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.66 56.0 4.72e-01 100.0% 76.4%
3up1A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 43.0 3.66e-01 77.0% 60.6%
5ex2A01 2.40.100.10 Mainly Beta › Beta Barrel › Cyclophilin › Cyclophilin-like 0.59 50.0 3.41e-01 98.4% 63.1%
6bnzA02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.59 47.0 3.62e-01 100.0% 38.6%
1ywxA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.58 42.0 3.68e-01 77.0% 78.3%
1jc4A00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.58 48.0 3.65e-01 100.0% 38.6%
4g65A04 3.30.70.1450 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain 0.58 39.0 3.47e-01 70.5% 81.3%
2b5lB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 46.0 2.85e-01 90.2% 27.2%
4ebrA00 3.30.1460.50 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.58 41.0 3.06e-01 88.5% 29.3%
5optY00 3.30.70.3370 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 42.0 3.40e-01 78.7% 61.8%
7yh2B01 3.30.1380.20 Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 0.57 50.0 3.81e-01 100.0% 82.0%
3kg8A01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 44.0 3.50e-01 85.2% 70.0%
2h0eB00 2.60.40.180 Mainly Beta › Sandwich › Immunoglobulin-like › Transthyretin/hydroxyisourate hydrolase domain 0.57 45.0 3.78e-01 90.2% 77.9%
1s1dA00 2.120.10.100 Mainly Beta › 6 Propeller › Neuraminidase › Apyrase 0.57 47.0 3.00e-01 93.4% 19.9%
2xlpB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 47.0 2.94e-01 93.4% 44.3%
2g9gA00 2.60.120.1020 Mainly Beta › Sandwich › Jelly Rolls › PAW domain 0.56 41.0 2.92e-01 96.7% 25.4%
7z0sF01 3.30.70.3270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 49.0 3.66e-01 100.0% 48.4%
4ci8A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 42.0 2.67e-01 93.4% 15.3%
4u1eI00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 44.0 2.79e-01 95.1% 16.4%
2ol5A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 42.0 3.09e-01 88.5% 74.3%
5cxoB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 44.0 3.46e-01 90.2% 74.6%
4yisB02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.54 39.0 3.13e-01 78.7% 70.6%
3mmyA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 47.0 2.94e-01 100.0% 95.8%
3fgbA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 45.0 2.80e-01 93.4% 16.3%
2d9rA00 2.40.30.100 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › AF2212/PG0164-like 0.54 43.0 3.98e-01 93.4% 90.6%
5c2vB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 45.0 2.85e-01 96.7% 19.9%
6qp7A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 48.0 2.82e-01 100.0% 97.5%
4khbC00 2.30.29.210 Mainly Beta › Roll › PH-domain like › FACT complex subunit Spt16p/Cdc68p 0.53 43.0 3.67e-01 91.8% 62.3%
6wqbA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 44.0 3.52e-01 100.0% 70.0%
4zn4A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 45.0 2.70e-01 93.4% 16.4%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.52 42.0 4.00e-01 96.7% 74.7%
4h5iB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 43.0 2.75e-01 95.1% 18.0%
3cz8A02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.52 42.0 4.37e-01 96.7% 100.0%
2f5tX02 2.30.30.690 Mainly Beta › Roll › SH3 type barrels. › 0.51 40.0 3.64e-01 90.2% 77.8%
5k19A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 42.0 2.56e-01 93.4% 14.6%
2vgmA01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.51 42.0 3.44e-01 93.4% 66.4%
2p12A01 2.40.380.10 Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like 0.51 42.0 3.25e-01 100.0% 51.6%
1rerA01 2.60.98.10 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Tick-borne Encephalitis virus Glycoprotein, domain 1 0.51 42.0 3.47e-01 100.0% 68.3%
4onyA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.51 41.0 2.74e-01 100.0% 56.0%
3g16B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 39.0 3.05e-01 90.2% 67.8%
4nhxA01 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.50 41.0 2.88e-01 96.7% 33.8%
ECOD (51)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3587330 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.92 86.0 5.05e-01 100.0% 15.8%
3949232 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.91 86.0 5.07e-01 100.0% 19.0%
5019257 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.90 84.0 5.23e-01 100.0% 22.1%
1005526 298.1.1.18 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › DRL_cat 0.66 53.0 3.81e-01 90.2% 85.0%
3490000 329.1.1.0 a+b two layers › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain 0.65 44.0 3.70e-01 72.1% 70.9%
3502340 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.62 42.0 2.52e-01 91.8% 9.9%
3744012 5.1.4.16 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A 0.62 48.0 2.99e-01 95.1% 14.4%
3627678 708.1.1.16 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.59 47.0 3.80e-01 88.5% 50.8%
4823114 5.1.4.265 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_WDR3_1st 0.58 44.0 3.37e-01 93.4% 35.5%
3569201 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.58 44.0 2.68e-01 93.4% 13.0%
3316791 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.58 44.0 2.72e-01 95.1% 14.3%
3632947 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.58 46.0 2.81e-01 93.4% 14.6%
4505104 5.1.4.248 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WDR55 0.57 44.0 2.66e-01 95.1% 12.5%
3722546 5.1.4.379 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, WD40_2 0.57 45.0 2.77e-01 93.4% 14.1%
3473061 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 48.0 3.65e-01 100.0% 56.2%
3787819 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.57 49.0 4.17e-01 100.0% 70.5%
3268695 5.1.4.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 0.56 47.0 2.82e-01 93.4% 13.3%
3720771 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.56 48.0 3.67e-01 100.0% 48.4%
None 0.56 42.0 2.67e-01 93.4% 16.3%
3991018 708.1.1.16 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.56 45.0 4.12e-01 88.5% 76.2%
3930164 5.1.4.259 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, ANAPC4_WD40, WD40_CDC20-Fz 0.56 43.0 2.61e-01 93.4% 11.7%
3713034 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.56 46.0 2.81e-01 93.4% 13.8%
3632843 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.56 49.0 3.67e-01 100.0% 48.4%
3939776 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.56 43.0 2.71e-01 93.4% 15.5%
3600593 5.1.4.254 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_NOL10_N 0.56 37.0 2.33e-01 91.8% 11.5%
3334025 1.1.7.68 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GUB_WAK_bind 0.55 43.0 3.74e-01 91.8% 71.4%
3282110 5.1.4.266 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_IFT122_1st 0.55 41.0 2.57e-01 93.4% 14.4%
3994860 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 47.0 2.86e-01 93.4% 18.4%
None 0.55 46.0 2.91e-01 93.4% 19.0%
3970026 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.55 46.0 2.95e-01 95.1% 19.7%
None 0.55 41.0 2.66e-01 95.1% 16.8%
3783625 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 48.0 2.97e-01 100.0% 96.5%
3961371 1.1.5.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.54 39.0 3.67e-01 80.3% 92.5%
5018908 1.1.5.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.54 40.0 3.32e-01 88.5% 80.7%
3667367 5.1.3.4 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › WD40 0.54 41.0 2.76e-01 93.4% 20.8%
4652260 5.1.4.271 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF30361 0.54 43.0 2.74e-01 95.1% 15.8%
4021342 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 43.0 2.71e-01 90.2% 19.1%
3576373 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.53 45.0 2.75e-01 95.1% 14.9%
3633736 5.1.5.75 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, ANAPC4_WD40 0.53 45.0 2.68e-01 93.4% 14.9%
3721787 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 43.0 3.80e-01 91.8% 62.4%
4025611 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 45.0 2.66e-01 93.4% 19.8%
3615426 4.11.1.1 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.52 43.0 3.33e-01 96.7% 60.0%
3999383 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 44.0 2.82e-01 100.0% 93.9%
3450723 5.1.4.259 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, ANAPC4_WD40, WD40_CDC20-Fz 0.51 42.0 2.54e-01 93.4% 19.8%
3483343 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 40.0 3.18e-01 86.9% 48.5%
3378955 5.1.4.259 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, ANAPC4_WD40, WD40_CDC20-Fz 0.51 42.0 2.59e-01 93.4% 21.0%
3437541 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.51 38.0 3.28e-01 90.2% 51.7%
3902278 5.1.4.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 0.51 41.0 2.60e-01 93.4% 24.3%
3232489 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 40.0 2.58e-01 95.1% 16.5%
3876327 5.5.1.0 beta duplicates or obligate multimers › beta-propeller-like 0.51 37.0 3.94e-01 93.4% 96.0%
3938828 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.50 39.0 2.42e-01 90.2% 16.2%