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IMGVR_UViG_643692044_000002-643692044-643830689

Arc-Vir

IMGVR_UViG_643692044_000002-643692044-643830689

Identity

Kingdom:
archaea

Quality

83.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-60
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1qoyA00 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.78 69.0 4.23e-01 100.0% 83.2%
2db7A01 6.10.250.980 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.69 54.0 5.40e-01 92.2% 86.8%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3773044 2004.1.1.122 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › IIGP 0.76 59.0 3.16e-01 86.3% 4.1%
4579149 1075.1.1.40 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › PF30101 0.71 59.0 3.81e-01 96.1% 20.8%
3500239 604.1.1.194 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › MENTAL 0.70 62.0 4.96e-01 100.0% 53.0%
D2 high residues 73-150
PDB
Domain cluster: representative
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ogqA01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.82 49.0 4.04e-01 100.0% 37.3%
4rs6A01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.75 46.0 3.94e-01 100.0% 41.5%
4o2wD00 2.130.10.30 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II 0.62 49.0 3.16e-01 85.9% 27.2%
3p34A02 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.60 44.0 4.13e-01 76.9% 90.7%
1nr0A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 48.0 3.21e-01 85.9% 26.2%
4dnuA00 2.130.10.30 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II 0.60 47.0 3.03e-01 85.9% 26.1%
2qm4A01 2.170.210.10 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal 0.59 51.0 4.25e-01 100.0% 83.9%
4l1mB00 2.130.10.30 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II 0.58 46.0 2.98e-01 85.9% 27.5%
1xipA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 45.0 2.91e-01 84.6% 18.5%
3mmyA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 47.0 3.10e-01 91.0% 23.2%
5h1kB02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 48.0 3.14e-01 91.0% 22.7%
4a0tA01 6.20.80.10 Special › Other non-globular › Glycosyl hydrolase fold › 0.57 36.0 3.98e-01 100.0% 80.3%
6g6qA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 45.0 3.63e-01 84.6% 47.9%
3nreA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.56 49.0 3.36e-01 100.0% 52.2%
4c0tA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 44.0 4.19e-01 100.0% 72.8%
1i2mB00 2.130.10.30 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II 0.56 46.0 2.93e-01 89.7% 25.3%
4hdjA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 44.0 2.85e-01 85.9% 19.7%
2ajrA01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.56 47.0 3.40e-01 100.0% 48.7%
2cnxA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 43.0 2.93e-01 85.9% 24.2%
4twlA00 3.10.200.10 Alpha Beta › Roll › Carbonic Anhydrase II › Alpha carbonic anhydrase 0.55 47.0 3.36e-01 94.9% 55.2%
1fwxA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 47.0 2.95e-01 97.4% 26.1%
2ymsA00 2.40.128.630 Mainly Beta › Beta Barrel › Lipocalin › 0.53 42.0 3.62e-01 85.9% 57.3%
3aihB01 2.70.130.10 Mainly Beta › Distorted Sandwich › Cation-dependent Mannose-6-phosphate Receptor; Chain A › Mannose-6-phosphate receptor binding domain 0.53 42.0 3.78e-01 84.6% 93.5%
2ymsC00 2.40.10.480 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.53 42.0 4.29e-01 85.9% 90.7%
2ymsB00 2.40.10.480 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.52 40.0 4.17e-01 84.6% 93.2%
4zgfA00 2.40.128.270 Mainly Beta › Beta Barrel › Lipocalin › 0.52 41.0 3.41e-01 85.9% 74.5%
7qzqA01 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.52 41.0 2.70e-01 84.6% 28.8%
3jbtA05 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 42.0 2.80e-01 91.0% 21.4%
2ynoA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 42.0 2.87e-01 91.0% 25.7%
5c3vA01 3.30.800.10 Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol Phosphate Kinase II Beta › Phosphatidylinositol Phosphate Kinase II Beta 0.51 40.0 3.29e-01 91.0% 88.6%
3ottB02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 43.0 2.90e-01 94.9% 26.3%
1k3xA01 3.20.190.10 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal 0.51 45.0 3.87e-01 100.0% 87.3%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3599562 292.2.1.0 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.87 48.0 4.65e-01 100.0% 50.6%
3585414 292.2.1.0 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.81 48.0 4.20e-01 100.0% 42.7%
1275015 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.81 48.0 4.33e-01 100.0% 46.1%
3504473 77.3.1.0 beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain 0.81 45.0 3.36e-01 100.0% 24.4%
3993048 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.80 48.0 4.16e-01 100.0% 42.7%
3536576 292.2.1.0 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.80 47.0 4.53e-01 100.0% 54.1%
3741285 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.80 46.0 4.26e-01 100.0% 47.4%
4003932 292.2.1.0 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.78 47.0 4.00e-01 100.0% 40.0%
4113536 6129.1.1.1 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.76 41.0 3.19e-01 97.4% 25.6%
3546306 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.75 46.0 4.29e-01 100.0% 51.6%
3843785 292.2.1.10 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › C5orf34-like_N 0.70 47.0 4.31e-01 100.0% 55.1%
3884681 292.2.1.10 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › C5orf34-like_N 0.69 45.0 4.19e-01 97.4% 54.7%
3406724 6129.1.1.0 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family 0.67 41.0 3.11e-01 98.7% 27.2%
5045528 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 50.0 3.28e-01 79.5% 26.5%
4001295 5.1.4.21 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Pep3_Vps18 0.66 52.0 3.36e-01 85.9% 23.1%
3474473 77.3.1.0 beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain 0.65 46.0 3.41e-01 100.0% 31.4%
3410220 5.1.4.218 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT80_2nd 0.64 54.0 3.58e-01 91.0% 24.1%
3711659 5.1.4.218 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT80_2nd 0.64 51.0 3.42e-01 85.9% 23.1%
3272286 220.1.1.174 beta barrels › PH domain-like › PH domain-like › PH domain-like › Cybc1_Eros 0.63 41.0 3.68e-01 100.0% 47.3%
3275111 5.1.4.304 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR11_2nd 0.63 51.0 3.29e-01 85.9% 21.5%
3586726 5.1.4.421 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_1st, Beta-prop_IFT140_2nd 0.63 51.0 3.37e-01 85.9% 25.1%
136950 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.63 49.0 3.20e-01 85.9% 26.8%
3282276 3735.1.1.9 beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › RHS_repeat+DUF6531 0.62 46.0 2.75e-01 100.0% 11.8%
3189366 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.62 51.0 3.23e-01 89.7% 18.0%
3440815 5.1.11.35 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Beta-prop_AT5G49610-like 0.62 51.0 3.33e-01 89.7% 30.6%
3935619 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.62 49.0 3.06e-01 85.9% 31.4%
3720799 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.62 49.0 3.20e-01 85.9% 21.2%
2991088 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.62 52.0 3.35e-01 91.0% 25.0%
3736996 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 52.0 3.34e-01 91.0% 24.3%
3744762 5.1.4.254 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_NOL10_N 0.61 49.0 3.28e-01 85.9% 23.7%
4443445 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 49.0 3.02e-01 85.9% 30.8%
3932539 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 48.0 3.22e-01 85.9% 23.3%
3740470 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.60 49.0 3.24e-01 85.9% 24.1%
3720216 192.8.1.234 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › WD40 0.60 51.0 3.09e-01 91.0% 14.6%
3782896 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.60 48.0 3.09e-01 85.9% 19.5%
3236693 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 48.0 3.22e-01 85.9% 27.9%
3947013 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.60 47.0 4.46e-01 83.3% 82.2%
3635917 5.1.10.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.59 41.0 3.96e-01 76.9% 63.3%
3424129 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 52.0 3.18e-01 94.9% 18.2%
4049822 5.1.4.62 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN 0.59 49.0 3.08e-01 92.3% 31.2%
3466257 5.1.3.142 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.59 49.0 3.18e-01 91.0% 27.5%
4013645 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 50.0 3.16e-01 91.0% 19.5%
3404226 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 50.0 3.26e-01 91.0% 24.1%
3431397 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.59 46.0 3.02e-01 85.9% 31.5%
3815611 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.58 46.0 3.11e-01 85.9% 34.0%
3610350 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.58 49.0 3.21e-01 91.0% 21.8%
None 0.58 46.0 3.19e-01 85.9% 27.5%
3248749 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.58 41.0 3.69e-01 74.4% 74.5%
3267754 719.1.1.2 beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF 0.58 50.0 4.38e-01 100.0% 96.0%
3169843 5.1.4.56 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › NUP214 0.58 45.0 2.86e-01 84.6% 16.8%
3476810 5.1.4.175 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT122_2nd 0.57 47.0 3.32e-01 91.0% 28.4%
5062107 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 48.0 3.20e-01 89.7% 24.7%
3311719 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.56 47.0 2.91e-01 92.3% 16.3%
3933159 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 46.0 3.08e-01 91.0% 25.4%
4940155 3111.1.1.0 beta barrels › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain 0.55 39.0 3.84e-01 100.0% 68.2%
3763965 5.1.4.341 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_2nd 0.55 49.0 3.19e-01 100.0% 97.5%
3815275 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.55 45.0 3.05e-01 89.7% 27.6%
3844573 5.1.3.170 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_IFT140_2nd 0.55 49.0 3.19e-01 100.0% 98.9%
3643787 5.1.3.142 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.54 46.0 3.00e-01 93.6% 27.6%
3804813 5.1.3.65 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 0.54 44.0 3.01e-01 91.0% 27.5%
3820157 5.1.4.550 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 0.54 41.0 3.09e-01 80.8% 44.3%
3430287 5.1.3.142 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.54 45.0 3.02e-01 92.3% 28.2%
3832622 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.54 44.0 2.97e-01 91.0% 30.8%
5059716 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.53 45.0 3.37e-01 100.0% 36.2%
5059545 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.53 42.0 2.77e-01 85.9% 22.5%
3481105 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.53 43.0 2.92e-01 91.0% 38.6%
4969614 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.53 45.0 3.40e-01 100.0% 38.0%