←Back to structures
IMGVR_UViG_643692044_000003-643692044-643832279
Arc-VirIMGVR_UViG_643692044_000003-643692044-643832279
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 53-112
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.84 | 46.0 | 4.49e-01 | 100.0% | 50.8% |
| 6gfaA02 | 3.30.30.30 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.77 | 42.0 | 4.37e-01 | 96.7% | 57.1% |
| 2x4jA01 | 2.30.30.600 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 36.0 | 3.04e-01 | 100.0% | 28.4% |
| 3vpbE00 | 2.20.28.160 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.63 | 34.0 | 3.52e-01 | 91.7% | 51.8% |
| 3o0wA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 52.0 | 3.62e-01 | 100.0% | 60.3% |
| 3licA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.61 | 45.0 | 3.25e-01 | 80.0% | 82.0% |
| 7xoiD01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.60 | 36.0 | 2.99e-01 | 91.7% | 33.6% |
| 2fhdA02 | 2.30.30.810 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 43.0 | 4.01e-01 | 100.0% | 62.5% |
| 3gmgA00 | 3.30.70.1880 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Protein of unknown function DUF881 | 0.59 | 45.0 | 3.48e-01 | 83.3% | 81.8% |
| 3qldA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.59 | 46.0 | 3.51e-01 | 86.7% | 98.7% |
| 5ocqA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 48.0 | 3.23e-01 | 96.7% | 42.4% |
| 2a6pA00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.58 | 48.0 | 3.45e-01 | 95.0% | 98.4% |
| 1kaxA02 | 3.30.30.30 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.54 | 38.0 | 3.96e-01 | 88.3% | 81.8% |
| 4e5sA02 | 3.50.30.60 | Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › LD-carboxypeptidase A C-terminal domain-like | 0.53 | 42.0 | 3.12e-01 | 90.0% | 78.8% |
| 1q90C00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.53 | 39.0 | 3.20e-01 | 83.3% | 79.4% |
| 1n7oA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.53 | 37.0 | 3.39e-01 | 75.0% | 70.6% |
| 4ebgA00 | 3.10.450.560 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 32.0 | 2.85e-01 | 98.3% | 37.1% |
| 2l89A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 35.0 | 2.99e-01 | 98.3% | 39.8% |
| 3kttB03 | 3.50.7.10 | Alpha Beta › 3-Layer(bba) Sandwich › GroEL › GroEL | 0.52 | 40.0 | 3.09e-01 | 88.3% | 88.9% |
| 1h2eA00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.52 | 41.0 | 2.97e-01 | 93.3% | 95.2% |
| 4tquS02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.51 | 42.0 | 4.22e-01 | 96.7% | 95.3% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5058103 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 45.0 | 4.37e-01 | 98.3% | 50.0% |
| 4392916 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.73 | 46.0 | 3.23e-01 | 100.0% | 22.3% |
| 5068106 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.61 | 41.0 | 4.01e-01 | 100.0% | 61.8% |
| 3253266 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 46.0 | 3.76e-01 | 100.0% | 46.7% |
| 3931861 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 49.0 | 4.07e-01 | 93.3% | 66.0% |
| 3261761 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 48.0 | 4.09e-01 | 98.3% | 72.6% |
| 5068989 | 325.1.8.6 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › ECR1_N_2 | 0.53 | 39.0 | 4.20e-01 | 95.0% | 98.0% |
| 3269057 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 46.0 | 4.02e-01 | 98.3% | 73.3% |
| 4947479 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 31.0 | 3.27e-01 | 98.3% | 66.0% |
| 4032503 | 372.1.1.3 ↗ | a+b complex topology › RNase A-like › RNase A-like › RNase A-like › Ntox50 | 0.51 | 34.0 | 2.93e-01 | 91.7% | 43.2% |
| 4968450 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 30.0 | 3.18e-01 | 93.3% | 63.6% |
| 3660613 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.50 | 37.0 | 3.99e-01 | 98.3% | 100.0% |