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IMGVR_UViG_646311906_000001-646311906-646510212

Arc-Vir

IMGVR_UViG_646311906_000001-646311906-646510212

Identity

Kingdom:
archaea

Quality

90.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-96
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1e7lA02 1.10.720.10 Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › 0.59 35.0 4.25e-01 79.8% 100.0%
1aoyA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 33.0 3.59e-01 85.1% 67.9%
3w0oA02 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.55 40.0 3.05e-01 75.5% 75.1%
2cazD00 6.10.140.820 Special › Helix non-globular › Helix Hairpins › 0.54 28.0 3.32e-01 77.7% 75.0%
1jeqA05 1.10.720.30 Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain 0.52 28.0 3.45e-01 72.3% 92.2%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3617834 2007.1.2.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.66 51.0 3.56e-01 81.9% 89.3%
4174868 109.2.1.0 alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid 0.54 45.0 2.71e-01 93.6% 89.9%
3460031 4106.1.1.1 few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC 0.51 38.0 2.92e-01 78.7% 79.5%