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IMGVR_UViG_646311944_000001-646311944-646367094
Arc-VirIMGVR_UViG_646311944_000001-646311944-646367094
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-79
Domain cluster:
rep: IMGVR_UViG_650716055_000001-650716055-650917117__D3-73
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1g8mA03 | 3.40.140.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › AICAR transformylase, duplication domain | 0.74 | 35.0 | 2.74e-01 | 71.8% | 21.8% |
| 2jveA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.70 | 46.0 | 4.66e-01 | 71.8% | 67.6% |
| 3r7wB02 | 3.30.450.190 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.65 | 39.0 | 3.26e-01 | 90.1% | 36.4% |
| 1yd0A00 | 3.40.1440.10 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.63 | 46.0 | 4.34e-01 | 78.9% | 78.7% |
| 4ehoB03 | 3.30.450.270 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain | 0.62 | 52.0 | 3.85e-01 | 91.5% | 75.4% |
| 5jxsA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.61 | 42.0 | 3.37e-01 | 73.2% | 70.4% |
| 2wadA02 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.59 | 42.0 | 3.41e-01 | 77.5% | 54.1% |
| 1g8mA02 | 3.40.140.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › AICAR transformylase, duplication domain | 0.57 | 37.0 | 2.71e-01 | 93.0% | 26.1% |
| 3mdnD00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.53 | 37.0 | 2.71e-01 | 74.6% | 24.2% |
| 1z3aA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.51 | 41.0 | 3.15e-01 | 85.9% | 82.1% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3513551 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.74 | 52.0 | 5.01e-01 | 73.2% | 100.0% |
| 4929482 | 3769.1.1.0 ↗ | 0.72 | 45.0 | 5.38e-01 | 81.7% | 100.0% | |
| 3974805 | 2498.1.1.71 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Aminopep | 0.65 | 51.0 | 3.25e-01 | 83.1% | 74.5% |
| 3496071 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.64 | 43.0 | 4.06e-01 | 70.4% | 86.7% |
| 3942306 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.64 | 48.0 | 3.49e-01 | 81.7% | 62.9% |
| 5005708 | 3755.3.1.127 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › NFACT_N | 0.63 | 49.0 | 3.78e-01 | 100.0% | 35.6% |
| 3510118 | 4076.1.1.0 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like | 0.61 | 42.0 | 4.65e-01 | 71.8% | 94.5% |
| 4216350 | 2010.1.1.1 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › DegV | 0.61 | 42.0 | 3.30e-01 | 73.2% | 88.7% |
| 3922306 | 4323.1.1.2 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V-ATPase_C | 0.61 | 49.0 | 3.23e-01 | 87.3% | 45.2% |
| 5035856 | 2484.2.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Methylated DNA-protein cysteine methyltransferase domain › Methylated DNA-protein cysteine methyltransferase domain | 0.60 | 45.0 | 4.45e-01 | 83.1% | 86.7% |
| 5052692 | 3740.1.1.4 ↗ | alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C | 0.59 | 54.0 | 3.39e-01 | 100.0% | 76.1% |
| 5008037 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.56 | 47.0 | 3.86e-01 | 90.1% | 78.4% |
| 4119657 | 3740.1.1.1 ↗ | alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_N,FrhB_FdhB_C | 0.55 | 50.0 | 3.34e-01 | 100.0% | 99.6% |
| 5018146 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.54 | 47.0 | 3.26e-01 | 97.2% | 94.7% |
| 3706359 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 40.0 | 2.85e-01 | 81.7% | 50.0% |
| 4985746 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 41.0 | 3.63e-01 | 84.5% | 97.1% |
| 1002416 | 2492.1.1.5 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › AICARFT_IMPCHas | 0.52 | 38.0 | 3.00e-01 | 80.3% | 74.2% |